BLASTX nr result

ID: Cimicifuga21_contig00011300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011300
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23219.3| unnamed protein product [Vitis vinifera]              132   6e-36
ref|XP_002266593.2| PREDICTED: dihydrolipoyllysine-residue succi...   132   6e-36
ref|XP_002529920.1| dihydrolipoamide succinyltransferase compone...   128   1e-35
ref|XP_002300330.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-35
ref|XP_002317337.1| predicted protein [Populus trichocarpa] gi|2...   132   5e-35

>emb|CBI23219.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  132 bits (333), Expect(2) = 6e-36
 Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
 Frame = -1

Query: 265 GKSITDGTLAKFLKNPEDSVNVDEPIAQVETDKVTIDVASPE---VQKFVAKEGDTVEPG 95
           G+SI+DGTLAKFLK P D V VDEPIAQ+ETDKVTIDVASPE   VQKFVAKEGD VEPG
Sbjct: 197 GESISDGTLAKFLKKPGDHVEVDEPIAQIETDKVTIDVASPEAGVVQKFVAKEGDVVEPG 256

Query: 94  TKIAVISKSTDGVPHAAPSEKKAPQDAPQPS 2
           TKIAVISKS +GV H APSEK   + +P+PS
Sbjct: 257 TKIAVISKSGEGVTHVAPSEKTPSKASPEPS 287



 Score = 43.1 bits (100), Expect(2) = 6e-36
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -3

Query: 341 SLIRVWNRSFSSDNGDLVDAVVPFMGE 261
           S I+V +R FSSD GDLVDAVVPFMGE
Sbjct: 172 SPIQVQHRPFSSDKGDLVDAVVPFMGE 198


>ref|XP_002266593.2| PREDICTED: dihydrolipoyllysine-residue succinyltransferase
           component of 2-oxoglutarate dehydrogenase complex 2,
           mitochondrial [Vitis vinifera]
          Length = 473

 Score =  132 bits (333), Expect(2) = 6e-36
 Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
 Frame = -1

Query: 265 GKSITDGTLAKFLKNPEDSVNVDEPIAQVETDKVTIDVASPE---VQKFVAKEGDTVEPG 95
           G+SI+DGTLAKFLK P D V VDEPIAQ+ETDKVTIDVASPE   VQKFVAKEGD VEPG
Sbjct: 108 GESISDGTLAKFLKKPGDHVEVDEPIAQIETDKVTIDVASPEAGVVQKFVAKEGDVVEPG 167

Query: 94  TKIAVISKSTDGVPHAAPSEKKAPQDAPQPS 2
           TKIAVISKS +GV H APSEK   + +P+PS
Sbjct: 168 TKIAVISKSGEGVTHVAPSEKTPSKASPEPS 198



 Score = 43.1 bits (100), Expect(2) = 6e-36
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -3

Query: 341 SLIRVWNRSFSSDNGDLVDAVVPFMGE 261
           S I+V +R FSSD GDLVDAVVPFMGE
Sbjct: 83  SPIQVQHRPFSSDKGDLVDAVVPFMGE 109


>ref|XP_002529920.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate
           dehydrogenase, putative [Ricinus communis]
           gi|223530597|gb|EEF32474.1| dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase, putative [Ricinus communis]
          Length = 469

 Score =  128 bits (322), Expect(2) = 1e-35
 Identities = 65/91 (71%), Positives = 77/91 (84%), Gaps = 3/91 (3%)
 Frame = -1

Query: 265 GKSITDGTLAKFLKNPEDSVNVDEPIAQVETDKVTIDVASPE---VQKFVAKEGDTVEPG 95
           G+SITDGTLAKFLKNP D V VDEPIAQ+ETDKVTIDVASPE   +++FVAKEG+TVEPG
Sbjct: 105 GESITDGTLAKFLKNPGDRVEVDEPIAQIETDKVTIDVASPEAGVIKEFVAKEGETVEPG 164

Query: 94  TKIAVISKSTDGVPHAAPSEKKAPQDAPQPS 2
           TK+A+ISKS +GV H APSEK   + +P+ S
Sbjct: 165 TKVAIISKSGEGVAHVAPSEKVPEKVSPKAS 195



 Score = 46.2 bits (108), Expect(2) = 1e-35
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = -3

Query: 356 ASQKASLIRVWNRSFSSDNGDLVDAVVPFMGE 261
           AS   +  +VW R FSSD+GDLVDAVVPFMGE
Sbjct: 75  ASSMMATKQVWIRPFSSDSGDLVDAVVPFMGE 106


>ref|XP_002300330.1| predicted protein [Populus trichocarpa] gi|222847588|gb|EEE85135.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  126 bits (316), Expect(2) = 2e-35
 Identities = 65/91 (71%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
 Frame = -1

Query: 265 GKSITDGTLAKFLKNPEDSVNVDEPIAQVETDKVTIDVASPE---VQKFVAKEGDTVEPG 95
           G+SITDGTLAKFLKNP DSV VDE IAQ+ETDKVTIDVASPE   +++++AKEGDTVEPG
Sbjct: 108 GESITDGTLAKFLKNPGDSVEVDEAIAQIETDKVTIDVASPEAGVIKEYIAKEGDTVEPG 167

Query: 94  TKIAVISKSTDGVPHAAPSEKKAPQDAPQPS 2
            KIAVISKS +GV H APSE  + + AP+ S
Sbjct: 168 AKIAVISKSGEGVAHVAPSENISQKAAPKQS 198



 Score = 48.1 bits (113), Expect(2) = 2e-35
 Identities = 23/37 (62%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
 Frame = -3

Query: 368 RDIVASQK-ASLIRVWNRSFSSDNGDLVDAVVPFMGE 261
           R++V++ + AS  + W+R FSSD GDLVDAVVPFMGE
Sbjct: 73  REVVSNMELASSKKTWSRPFSSDTGDLVDAVVPFMGE 109


>ref|XP_002317337.1| predicted protein [Populus trichocarpa] gi|222860402|gb|EEE97949.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  132 bits (331), Expect(2) = 5e-35
 Identities = 67/89 (75%), Positives = 76/89 (85%), Gaps = 3/89 (3%)
 Frame = -1

Query: 265 GKSITDGTLAKFLKNPEDSVNVDEPIAQVETDKVTIDVASPE---VQKFVAKEGDTVEPG 95
           G+SITDGTLAKFLKNP D V VDEPIAQ+ETDKVTIDVASPE   +++ +AKEGDTVEPG
Sbjct: 107 GESITDGTLAKFLKNPGDRVEVDEPIAQIETDKVTIDVASPEAGVIKELIAKEGDTVEPG 166

Query: 94  TKIAVISKSTDGVPHAAPSEKKAPQDAPQ 8
           TKIAVISKS +GV HAAPSE  + Q AP+
Sbjct: 167 TKIAVISKSGEGVAHAAPSENTSKQSAPE 195



 Score = 40.8 bits (94), Expect(2) = 5e-35
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -3

Query: 329 VWNRSFSSDNGDLVDAVVPFMGE 261
           + +R FSSD+GDLVDAVVPFMGE
Sbjct: 86  ILSRPFSSDSGDLVDAVVPFMGE 108


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