BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011288
         (3232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...  1092   0.0  
emb|CBI34982.3| unnamed protein product [Vitis vinifera]             1065   0.0  
ref|XP_002300024.1| predicted protein [Populus trichocarpa] gi|2...   993   0.0  
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   983   0.0  
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   969   0.0  

>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score = 1092 bits (2823), Expect = 0.0
 Identities = 589/1009 (58%), Positives = 724/1009 (71%), Gaps = 9/1009 (0%)
 Frame = +3

Query: 108  KPSKFTIQSSSTTPPNPQTISKTVIKRIAEKLRSLGYIEEQKNSEQNRQPQPTNNSAGEI 287
            KPSKF +++S+   P+ QT+ KT I+RIAEKLRSLGY++  ++ +     +P N SAGEI
Sbjct: 61   KPSKFILRASN---PDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEI 117

Query: 288  FLPFPQQLPNHRVGHTIDSSWSTPQNPVPEPGSGVAISRFHXXXXXXXXXXXXXXXXXXX 467
            F+P P QLP HRVGHTID SWS P+NPVPEPG+G  I+RFH                   
Sbjct: 118  FVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKEDER 177

Query: 468  X-SLAELKVSAEELRRLRTIGVGLRKKLNVGKPGITEGIVNGIHERWRQMEVVKVKCEDL 644
              +LAEL +  EELRRL+ IG+ +RKKL VGK GITEGIVNGIHERWR+ EVVK++CED+
Sbjct: 178  APTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDI 237

Query: 645  CKMNMKRTHDLLERKTGGLVIWRSGSTIILYRGANYKYPYFLSSVNEKNXXXXXXXXXXX 824
            CK+NMKRTHD+LERKTGGLVIWRSGS IILYRGANYKYPYFLS  N  N           
Sbjct: 238  CKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQ 297

Query: 825  XXXXXXXGEKHNNLAGIDGVKSGSSNQFNKMAHPSLVHGVGSPNKVRFQLPGEAQLTEEA 1004
                   G++  + +G   VKS      NK+A  SL+ GVG P +VRFQLPGEAQL EEA
Sbjct: 298  MNNEEHDGKEVCS-SGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEA 356

Query: 1005 DCMLDGLGPRFTEWWGYDPVPVDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTTLRRL 1184
            D +LDGLGPRFT+WWGYDP+P+DADLLPA+VPGYRRPFRLLPYG+KPKLT+DEMT LRRL
Sbjct: 357  DRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRL 416

Query: 1185 SRPLPCHFALGRNRRLQGLAVSMVKLWEKCEIAKIAVKHGVQNTNSDMMAEELKWLTGGT 1364
             RPLPCHFALGRNR+LQGLA SM+KLWEKCEIAKIAVK GVQNTNS+MMAEELK LTGGT
Sbjct: 417  GRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGT 476

Query: 1365 LLSRDREFIVFYRGKDFLPSAVSTAIEERRKQVVHKEKPTKGENSSVGTTPQVDLGTELV 1544
            LLSRDREFIVFYRGKDFLP AVS+AIE RRK  +H+ K     +       + +LGT   
Sbjct: 477  LLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEH 536

Query: 1545 ACDDDHQETIQKNIELVTEQKKVKSASSRIKRISTKLATALEKKENAERLLSDLDKAAEP 1724
            A D D   T  +    +++++ ++SA + ++R + KL+ ALEKKE AE+LL++L++A  P
Sbjct: 537  ASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIP 596

Query: 1725 QKPEVDKEGITEEERYMLKKVGLRMKAYLPLGRRGIFDGTVENMHLHWKYRELVKIMASE 1904
            Q+PE+DKEGITEEERYML+KVGLRMK +L LGRRGIFDGTVENMHLHWKYRELVKI+++ 
Sbjct: 597  QQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNG 656

Query: 1905 RSFEDVHAAARTLEAESGGILVAVERVNREYAIIVYRGKNYQRPVDLRPRTLLNKKQALK 2084
            RS ED+H  ARTLEAESGGILVAVERV++ YAII+YRGKNY+RP  LRP+TLLNK++ALK
Sbjct: 657  RSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALK 716

Query: 2085 RSIEAQRRESLQLHVLKLTKNIDQLKLQLVK--DDAEMNSSQLNENTEFETSDS--GGLV 2252
            RS+EAQRRESL+LHVL+LT+NID+LK QLV    D E NS QL + +    +    G  V
Sbjct: 717  RSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLARERYGADV 776

Query: 2253 KYFHNXXXXXXXXXXXXXXXHTCVDASNYSEETIQLHKLMDTGSKYVGPA-ETELKSSLE 2429
               H+                  +D+S  S +T    K +D  S       E   + S E
Sbjct: 777  ILIHSSDG---------------MDSSRDSLQTSHNDKRIDFPSMCDSDTDEANPEPSSE 821

Query: 2430 PKFRRKHSNTLQSEESDTDGSDFTSSAVKSLSQDGVTSSVIDDAEAHVSGDELIDSSLEL 2609
               +   +N L    +D +     ++  + L   G TS       A V+ +E ++SS++ 
Sbjct: 822  SVLKEIETNVL----TDMNEEGECTTCSEDLVSQGETS-----CYAIVNHEETMESSVKS 872

Query: 2610 EREKLDPSVHRAIEKASNLVVPFKAAPLSNRDRLLLRKQALKMRRRPVLAIGRSNIVTGV 2789
             + +  P V R ++  SN  +PF+AAPLSNR+RLLLRKQAL+M++RPV+A+GRSNIVTGV
Sbjct: 873  SKNEFKPPVQRPVDTRSN-EMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGV 931

Query: 2790 AKTIKTHFQKNPLAIVNIKGRAEGTSIQEVIFKLEQATGAVLVSQETNKVILYRGWGMEE 2969
            AKTIK HFQK+PLAIVN+KGRA+GTS+QEVIFKLEQATGAVLVSQE +KVILYRGWG  E
Sbjct: 932  AKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGARE 991

Query: 2970 GQG---GVKDKRNTRTTAGREHNTQEVVSSRLMEAIRLECGLEINQEEG 3107
              G    +      +T+AGRE   +  VS  L  AIRLECGL+ NQ++G
Sbjct: 992  ENGRSYRMNRSDARKTSAGREGGPRPTVSPELRAAIRLECGLKSNQDKG 1040


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score = 1065 bits (2753), Expect = 0.0
 Identities = 575/986 (58%), Positives = 709/986 (71%), Gaps = 8/986 (0%)
 Frame = +3

Query: 108  KPSKFTIQSSSTTPPNPQTISKTVIKRIAEKLRSLGYIEEQKNSEQNRQPQPTNNSAGEI 287
            KPSKF +++S+   P+ QT+ KT I+RIAEKLRSLGY++  ++ +     +P N SAGEI
Sbjct: 61   KPSKFILRASN---PDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEI 117

Query: 288  FLPFPQQLPNHRVGHTIDSSWSTPQNPVPEPGSGVAISRFHXXXXXXXXXXXXXXXXXXX 467
            F+P P QLP HRVGHTID SWS P+NPVPEPG+G  I+RFH                   
Sbjct: 118  FVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKEDER 177

Query: 468  X-SLAELKVSAEELRRLRTIGVGLRKKLNVGKPGITEGIVNGIHERWRQMEVVKVKCEDL 644
              +LAEL +  EELRRL+ IG+ +RKKL VGK GITEGIVNGIHERWR+ EVVK++CED+
Sbjct: 178  APTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDI 237

Query: 645  CKMNMKRTHDLLERKTGGLVIWRSGSTIILYRGANYKYPYFLSSVNEKNXXXXXXXXXXX 824
            CK+NMKRTHD+LERKTGGLVIWRSGS IILYRGANYKYPYFLS  N  N           
Sbjct: 238  CKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQ 297

Query: 825  XXXXXXXGEKHNNLAGIDGVKSGSSNQFNKMAHPSLVHGVGSPNKVRFQLPGEAQLTEEA 1004
                   G++  + +G   VKS      NK+A  SL+ GVG P +VRFQLPGEAQL EEA
Sbjct: 298  MNNEEHDGKEVCS-SGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEA 356

Query: 1005 DCMLDGLGPRFTEWWGYDPVPVDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTTLRRL 1184
            D +LDGLGPRFT+WWGYDP+P+DADLLPA+VPGYRRPFRLLPYG+KPKLT+DEMT LRRL
Sbjct: 357  DRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRL 416

Query: 1185 SRPLPCHFALGRNRRLQGLAVSMVKLWEKCEIAKIAVKHGVQNTNSDMMAEELKWLTGGT 1364
             RPLPCHFALGRNR+LQGLA SM+KLWEKCEIAKIAVK GVQNTNS+MMAEELK LTGGT
Sbjct: 417  GRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGT 476

Query: 1365 LLSRDREFIVFYRGKDFLPSAVSTAIEERRKQVVHKEKPTKGENSSVGTTPQVDLGTELV 1544
            LLSRDREFIVFYRGKDFLP AVS+AIE RRK  +H+ K     +       + +LGT   
Sbjct: 477  LLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEH 536

Query: 1545 ACDDDHQETIQKNIELVTEQKKVKSASSRIKRISTKLATALEKKENAERLLSDLDKAAEP 1724
            A D D   T  +    +++++ ++SA + ++R + KL+ ALEKKE AE+LL++L++A  P
Sbjct: 537  ASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIP 596

Query: 1725 QKPEVDKEGITEEERYMLKKVGLRMKAYLPLGRRGIFDGTVENMHLHWKYRELVKIMASE 1904
            Q+PE+DKEGITEEERYML+KVGLRMK +L LGRRGIFDGTVENMHLHWKYRELVKI+++ 
Sbjct: 597  QQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNG 656

Query: 1905 RSFEDVHAAARTLEAESGGILVAVERVNREYAIIVYRGKNYQRPVDLRPRTLLNKKQALK 2084
            RS ED+H  ARTLEAESGGILVAVERV++ YAII+YRGKNY+RP  LRP+TLLNK++ALK
Sbjct: 657  RSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALK 716

Query: 2085 RSIEAQRRESLQLHVLKLTKNIDQLKLQLVK--DDAEMNSSQLNENTEFETSDS--GGLV 2252
            RS+EAQRRESL+LHVL+LT+NID+LK QLV    D E NS QL + +    +    G  V
Sbjct: 717  RSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLARERYGADV 776

Query: 2253 KYFHNXXXXXXXXXXXXXXXHTCVDASNYSEETIQLHKLMDTGSKYVGPA-ETELKSSLE 2429
               H+                  +D+S  S +T    K +D  S       E   + S E
Sbjct: 777  ILIHSSDG---------------MDSSRDSLQTSHNDKRIDFPSMCDSDTDEANPEPSSE 821

Query: 2430 PKFRRKHSNTLQSEESDTDGSDFTSSAVKSLSQDGVTSSVIDDAEAHVSGDELIDSSLEL 2609
               +   +N L    +D +     ++  + L   G TS       A V+ +E ++SS++ 
Sbjct: 822  SVLKEIETNVL----TDMNEEGECTTCSEDLVSQGETS-----CYAIVNHEETMESSVKS 872

Query: 2610 EREKLDPSVHRAIEKASNLVVPFKAAPLSNRDRLLLRKQALKMRRRPVLAIGRSNIVTGV 2789
             + +  P V R ++  SN  +PF+AAPLSNR+RLLLRKQAL+M++RPV+A+GRSNIVTGV
Sbjct: 873  SKNEFKPPVQRPVDTRSN-EMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGV 931

Query: 2790 AKTIKTHFQKNPLAIVNIKGRAEGTSIQEVIFKLEQATGAVLVSQETNKVILYRGWGM-- 2963
            AKTIK HFQK+PLAIVN+KGRA+GTS+QEVIFKLEQATGAVLVSQE +KVILYRGWG   
Sbjct: 932  AKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGARE 991

Query: 2964 EEGQGGVKDKRNTRTTAGREHNTQEV 3041
            E G+    ++ N    +  E++TQ V
Sbjct: 992  ENGRSYRMNRINIVFKSAEENSTQMV 1017


>ref|XP_002300024.1| predicted protein [Populus trichocarpa] gi|222847282|gb|EEE84829.1|
            predicted protein [Populus trichocarpa]
          Length = 1012

 Score =  993 bits (2568), Expect = 0.0
 Identities = 558/1002 (55%), Positives = 684/1002 (68%), Gaps = 7/1002 (0%)
 Frame = +3

Query: 117  KFTIQSSSTTPPNPQTISKTVIKRIAEKLRSLGYIEEQKNSEQNRQPQPTNNSAGEIFLP 296
            KF ++SSS    NPQT+  + I+RIA+KLRSLG+ EE +   Q         +AGEIF+P
Sbjct: 48   KFLVRSSSAD--NPQTLPHSAIQRIADKLRSLGFTEETETKAQT--------TAGEIFVP 97

Query: 297  FPQQLPNHRVGHTIDSSWSTPQNPVPEPGSGVAISRFHXXXXXXXXXXXXXXXXXXXXSL 476
             P +LP +RVG T+D SWSTP+NPVP PGSG AISR+H                    SL
Sbjct: 98   LPNRLPKYRVGQTLDPSWSTPENPVPVPGSGKAISRYHELRREVKREREAKKGEAKVPSL 157

Query: 477  AELKVSAEELRRLRTIGVGLRKKLNVGKPGITEGIVNGIHERWRQMEVVKVKCEDLCKMN 656
            AEL +  EELRRLRTIG+  ++KL VGK GITEGIVNGIHERWR+ EVVK+ CEDLC+MN
Sbjct: 158  AELSLPNEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMN 217

Query: 657  MKRTHDLLERKTGGLVIWRSGSTIILYRGANYKYPYFL---SSVNEKNXXXXXXXXXXXX 827
            MKRTHDLLERKTGGLV+WR GS I+LYRGA+YKYPYFL   SSVNE +            
Sbjct: 218  MKRTHDLLERKTGGLVVWRVGSKIVLYRGADYKYPYFLAETSSVNETSPDAVQNIDVDDK 277

Query: 828  XXXXXXGEKHNNLAGIDGVKSGSSNQFNKMAHPSLVHGVGSPNKVRFQLPGEAQLTEEAD 1007
                   E+ + L+ +DG         +++  PSLV GVGSPN+VRFQLPGEAQLTEEAD
Sbjct: 278  EVD----EEGSVLSAVDGAAPPEPRSSDEIVRPSLVQGVGSPNRVRFQLPGEAQLTEEAD 333

Query: 1008 CMLDGLGPRFTEWWGYDPVPVDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTTLRRLS 1187
             +LDGLGPRF +WWGYDP+PVDADLLPA+V GYRRPFRLLPYG+ P LT+DEMTTL+RL 
Sbjct: 334  QLLDGLGPRFNDWWGYDPLPVDADLLPAVVSGYRRPFRLLPYGVSPTLTNDEMTTLKRLG 393

Query: 1188 RPLPCHFALGRNRRLQGLAVSMVKLWEKCEIAKIAVKHGVQNTNSDMMAEELKWLTGGTL 1367
            RPLPCHFALGRN + QGLA S+VKLWEKCEIAKIAVK GVQNTNS++MA+ELKWLTGGTL
Sbjct: 394  RPLPCHFALGRNTKHQGLAASIVKLWEKCEIAKIAVKRGVQNTNSELMAQELKWLTGGTL 453

Query: 1368 LSRDREFIVFYRGKDFLPSAVSTAIEERRKQVVHKEKPTKGENSSVGTTPQVDLG--TEL 1541
            LSRDREFIV YRGKDFLPSAVS+AIE+RRK+    ++ T    S+  +    D    T  
Sbjct: 454  LSRDREFIVLYRGKDFLPSAVSSAIEDRRKRGDMDKRWTDCITSNETSEELKDRSWRTTN 513

Query: 1542 VACDDDHQETIQKNIELVTEQKKVKSASSRIKRISTKLATALEKKENAERLLSDLDKAAE 1721
                D+  +T  +  +L +E K ++S  + IKR S KL+ ALEKK  AE+LLS+L+K+  
Sbjct: 514  AKSRDEIDDTNDRKHDL-SENKNLRSTDAAIKRTSIKLSMALEKKAKAEKLLSELEKSEM 572

Query: 1722 PQKPEVDKEGITEEERYMLKKVGLRMKAYLPLGRRGIFDGTVENMHLHWKYRELVKIMAS 1901
             Q+PE DKEGITEEERYML+K+GL+MK +L +G RG+FDGT+ENMHLHWKYRELVKI+  
Sbjct: 573  SQQPEKDKEGITEEERYMLRKIGLKMKPFLLMGERGVFDGTIENMHLHWKYRELVKIICK 632

Query: 1902 ERSFEDVHAAARTLEAESGGILVAVERVNREYAIIVYRGKNYQRPVDLRPRTLLNKKQAL 2081
            E+SF+ V A ARTLEAESGGILVAVE V++ YAII+YRGKNY RP  LRP TLL+K+QA+
Sbjct: 633  EKSFQAVQAVARTLEAESGGILVAVEGVSKGYAIILYRGKNYTRPACLRPPTLLSKRQAM 692

Query: 2082 KRSIEAQRRESLQLHVLKLTKNIDQLKLQLVKDDAEMNSSQLNENTEFETSDSGGLV-KY 2258
            KRS+EAQRRESL+LHVL+LT NID LKLQLV      + + LN    F +  +   V KY
Sbjct: 693  KRSLEAQRRESLKLHVLRLTSNIDHLKLQLV------SLTFLNSFDCFYSPSTFLFVGKY 746

Query: 2259 FHNXXXXXXXXXXXXXXXHTCVDASNYSEETIQLHKLMDTGSKYVGPAETELKSSLEPKF 2438
            F                  T      Y   T +L +          PA T+  S L+P  
Sbjct: 747  FQPMKFRKVIHLQYHPTISTTTTIEKYF--TYELEE----------PARTD--SELKPDC 792

Query: 2439 RRKHSNTLQSEESDTDGSDFTSSAVKSLSQDGVTSSVIDDAEAHVSGDELIDSSLELERE 2618
                +               TS   +S+S        I   +  VS +E + SS++    
Sbjct: 793  HSYSTIPADCNAIIEVRYISTSKEKRSIS--------ITYLKNCVSFNEEMGSSVKSAEN 844

Query: 2619 KLDPSVHRAIEKASNLVVPFKAAPLSNRDRLLLRKQALKMRRRPVLAIGRSNIVTGVAKT 2798
            +   SV   +E+ +    P     LSNRDRLLLRKQALKM+ RPVLA+GRSNIVTGVAKT
Sbjct: 845  QSGESVPIVVEEDNR--KPSSVVCLSNRDRLLLRKQALKMKNRPVLAVGRSNIVTGVAKT 902

Query: 2799 IKTHFQKNPLAIVNIKGRAEGTSIQEVIFKLEQATGAVLVSQETNKVILYRGWGM-EEGQ 2975
            IK HFQ++P AIV++KGRA+GTS+QEV+ KLE+ATGAVLVSQE +KVILYRGWG  E G 
Sbjct: 903  IKAHFQRHPFAIVHVKGRAKGTSVQEVVSKLEEATGAVLVSQEPSKVILYRGWGAGEPGH 962

Query: 2976 GGVKDKRNTRTTAGREHNTQEVVSSRLMEAIRLECGLEINQE 3101
             G ++K+N    +  +  ++  VS  LMEAIRLECGL+ N +
Sbjct: 963  KGKENKQNAGEASRAKGRSRHAVSLELMEAIRLECGLQHNHQ 1004


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  983 bits (2540), Expect = 0.0
 Identities = 544/1011 (53%), Positives = 692/1011 (68%), Gaps = 13/1011 (1%)
 Frame = +3

Query: 111  PSKFTIQSSSTTPPNPQTISKTVIKRIAEKLRSLGYIEEQKNSEQNRQPQPTNNSAGEIF 290
            PSK +I    +   N +T+  + I+RIA+KLRSLG+ E        R    T    GEIF
Sbjct: 36   PSKSSITIHCS---NSKTVPSSAIQRIADKLRSLGFAEHNPEPH-TRNSAETKQREGEIF 91

Query: 291  LPFPQQLPNHRVGHTIDSSWSTPQNPVPEPGSGVAISRFHXXXXXXXXXXXXXXXXXXXX 470
            +P P +L  +RVGHT+D SWSTP+NPVP PGSG AI R+H                    
Sbjct: 92   IPLPNELSKYRVGHTLDPSWSTPENPVPRPGSGNAILRYHELRKQVKKEREDKKREAKVP 151

Query: 471  SLAELKVSAEELRRLRTIGVGLRKKLNVGKPGITEGIVNGIHERWRQMEVVKVKCEDLCK 650
            +LAEL +S EELRRLR IG+  ++KL VGK GITEGIVNGIHERWR+ EVVK+ CEDLC+
Sbjct: 152  TLAELSLSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCR 211

Query: 651  MNMKRTHDLLERKTGGLVIWRSGSTIILYRGANYKYPYFLSSVNEKNXXXXXXXXXXXXX 830
            MNMKRTHDLLERKTGGLV+WR+GS I+LYRG NY YPYFLS    +N             
Sbjct: 212  MNMKRTHDLLERKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSIDAVQDT--- 268

Query: 831  XXXXXGEKHNNL-------AGIDGVKSGSSNQFNKMAHPSLVHGVGSPNKVRFQLPGEAQ 989
                   KHN+        + +DGVK    +  NK   P+L+ GVG PN+VRFQLPGEAQ
Sbjct: 269  ------HKHNDSDKIKSCSSSVDGVKFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQ 322

Query: 990  LTEEADCMLDGLGPRFTEWWGYDPVPVDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMT 1169
            L EE D +L+GLGPRF++WWGY+P+PVDADLLPAIVPGY++PFRLLPYGIKP LT+DEMT
Sbjct: 323  LAEEVDSLLEGLGPRFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTNDEMT 382

Query: 1170 TLRRLSRPLPCHFALGRNRRLQGLAVSMVKLWEKCEIAKIAVKHGVQNTNSDMMAEELKW 1349
            TL+RL RPLPCHF LGRNR+LQGLA S++KLWEKCEIAKIAVK GVQNTNS+MMAEELK 
Sbjct: 383  TLKRLGRPLPCHFVLGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKR 442

Query: 1350 LTGGTLLSRDREFIVFYRGKDFLPSAVSTAIEERRKQVVHKEKPTKGENSSVGTTPQ--- 1520
            LTGGTLLSRDREFIV YRGKDFLPSAVS+AI+ERR  V +  K     ++S  T  +   
Sbjct: 443  LTGGTLLSRDREFIVLYRGKDFLPSAVSSAIKERRNHVFNVAKERTDNSTSAETAKEAED 502

Query: 1521 VDLGTELVACDDDHQETIQKNIELVTEQKKVKSASSRIKRISTKLATALEKKENAERLLS 1700
            V+ GT      D+     +++ +L ++Q+K+      IKR S +L+ ALEKK  A +LL+
Sbjct: 503  VEDGTSNSGSQDEFHGNNEQSYDL-SKQRKLSFTKEAIKRTSIRLSMALEKKAKAVKLLA 561

Query: 1701 DLDKAAEPQKPEVDKEGITEEERYMLKKVGLRMKAYLPLGRRGIFDGTVENMHLHWKYRE 1880
            +++ +   Q+PE+DKEGIT+EERYML+KVGL+MK +L +GRRG+FDGT+ENMHLHWKYRE
Sbjct: 562  EIENSEMSQQPEIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRE 621

Query: 1881 LVKIMASERSFEDVHAAARTLEAESGGILVAVERVNREYAIIVYRGKNYQRPVDLRPRTL 2060
            LVKI+  ERS   VH  A++LEAESGGILVAVERV++ YAI+VYRGKNYQRP  LRP TL
Sbjct: 622  LVKIICKERSLNAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTL 681

Query: 2061 LNKKQALKRSIEAQRRESLQLHVLKLTKNIDQLKLQLVKDDAEMNSSQLNENTEFETSDS 2240
            L+K++A+KRS+EAQRRESL+LHVL+LT+NI+ LKL+L+      N + +   +EFE S S
Sbjct: 682  LSKREAMKRSLEAQRRESLKLHVLRLTRNINDLKLKLL-----FNGNGIG-RSEFE-SLS 734

Query: 2241 GGLVKYFHNXXXXXXXXXXXXXXXHTCVDASNYSEETIQLHKLMDTGSKYVGPAETELKS 2420
              L K                   H  V+     E+  Q++  +      +G  E E  S
Sbjct: 735  ISLSK-----------------ESHASVNIIQPDEQASQINPSLLYDGIRIGKNEPE--S 775

Query: 2421 SLEPKFRRKHSNTLQSEESDTDGSDFTSSAVKSLSQDGVTSSVIDDAEAHVSGDELIDSS 2600
            S E   +  H++   +   +    D TS    S+S++  +   +  AE  V  ++++ S+
Sbjct: 776  SSESLSKETHASLFTA--INGGAVDSTSFPNTSMSEERGSYPCV-SAENCVHENKIMGST 832

Query: 2601 LELEREKLDPSVHRAIEKASNLVVPFKAAPLSNRDRLLLRKQALKMRRRPVLAIGRSNIV 2780
            +E     L+ SV  +I    +  +      LSNRDRL+LRKQALKM+ RPVLA+GRSNIV
Sbjct: 833  VESTTTVLEESV--SISANEDNEMQSSTICLSNRDRLMLRKQALKMKNRPVLAVGRSNIV 890

Query: 2781 TGVAKTIKTHFQKNPLAIVNIKGRAEGTSIQEVIFKLEQATGAVLVSQETNKVILYRGWG 2960
            TGVAKTIK HF+K PLAIVN+KGRA+GTS+QEV+F+LEQATG VLVSQE +KVILYRGWG
Sbjct: 891  TGVAKTIKAHFKKYPLAIVNVKGRAKGTSVQEVVFQLEQATGGVLVSQEPSKVILYRGWG 950

Query: 2961 M--EEGQGGVKDKRNT-RTTAGREHNTQEVVSSRLMEAIRLECGLEINQEE 3104
               E G  G K+  ++ +T+  +E +++  +S  LM AIRLECGL+  QE+
Sbjct: 951  AFDEPGHRGKKNAHDSGKTSVVKEESSRLGMSPELMAAIRLECGLQNKQEQ 1001


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  969 bits (2505), Expect = 0.0
 Identities = 528/1016 (51%), Positives = 687/1016 (67%), Gaps = 23/1016 (2%)
 Frame = +3

Query: 108  KPSKFTIQSSSTTPPNPQTISKTVIKRIAEKLRSLGYIEEQKNSEQNRQPQPTNNSA-GE 284
            K S+F ++  S    + +T+ K+ I+RIA+KLRSLG+ E    S     P P + SA G 
Sbjct: 38   KSSRFLLRCCSI---DSETLPKSAIQRIADKLRSLGFTE----SPPEPLPDPNSPSAPGA 90

Query: 285  IFLPFPQQLPNHRVGHTIDSSWSTPQNPVPEPGSGVAISRFHXXXXXXXXXXXXXXXXXX 464
            IF+P P QLP +RVGHTIDSSWS P+NPVPEPG+G AI RFH                  
Sbjct: 91   IFVPLPNQLPKYRVGHTIDSSWSMPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREK 150

Query: 465  XX-----SLAELKVSAEELRRLRTIGVGLRKKLNVGKPGITEGIVNGIHERWRQMEVVKV 629
                   SLAEL ++ EEL RLRTIG+ L+KKLNVGK GITEGIVN IHE WR+ EVVK+
Sbjct: 151  KREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKI 210

Query: 630  KCEDLCKMNMKRTHDLLERKTGGLVIWRSGSTIILYRGANYKYPYFLSSVNEKNXXXXXX 809
             CEDLC++NMKRTHDLLERKTGG+V+WRSGS IILYRG NY YPYF   + E        
Sbjct: 211  ACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDAL 270

Query: 810  XXXXXXXXXXXXGEKHNNLAGIDGVKSGSSNQFNKMAHPSLVHGVGSPNKVRFQLPGEAQ 989
                         E  + L+ I+  +S       KM  P+L+ GVG+PN+VRFQLPGEA+
Sbjct: 271  PASHSDDGGN--SETESTLSCINDERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAE 328

Query: 990  LTEEADCMLDGLGPRFTEWWGYDPVPVDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMT 1169
            L E+A+ +L+GLGPRF++WWGYDP+PVDADLLPAIVPGYR+PFRLLPYG+KPKLT+DEMT
Sbjct: 329  LAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMT 388

Query: 1170 TLRRLSRPLPCHFALGRNRRLQGLAVSMVKLWEKCEIAKIAVKHGVQNTNSDMMAEELKW 1349
            +LRRL+RPLPCHFALGRNR+LQGLA S+++LWEKCEIAKIAVK GVQNTN+ +MAEEL+ 
Sbjct: 389  SLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQL 448

Query: 1350 LTGGTLLSRDREFIVFYRGKDFLPSAVSTAIEERRKQVVHKEKPTKGENSSVGTTPQVDL 1529
            LTGGTLLSRDREFIV YRGKDFLP AVS+A+E++R   +H+ K T    ++ G   ++++
Sbjct: 449  LTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRLHEMKQTDNSPATTGQGLKLEI 508

Query: 1530 GTELVACDDDHQETIQKNIELVTEQKKVKSASSRIKRISTKLATALEKKENAERLLSDLD 1709
                     +  ++I    ++V+E++K+ S+ + +++ S KL+ ALEKK  AE  L+ L+
Sbjct: 509  NEN---GPTNESQSITGWKKIVSERRKLMSSETSMRKTSIKLSIALEKKAKAEEFLAKLE 565

Query: 1710 KAAEPQKPEVDKEGITEEERYMLKKVGLRMKAYLPLGRRGIFDGTVENMHLHWKYRELVK 1889
            +  + Q+PE+DKEGIT EERYMLKKVGLRMK +L LGRRG+FDGTVENMHLHWKYRELVK
Sbjct: 566  EEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVK 625

Query: 1890 IMASERSFEDVHAAARTLEAESGGILVAVERVNREYAIIVYRGKNYQRPVDLRPRTLLNK 2069
            I+ +ERSF+ VH  ARTLEAESGGILVAVERV R +AII++RGKNY+RP  LRP +LLNK
Sbjct: 626  IITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNK 685

Query: 2070 KQALKRSIEAQRRESLQLHVLKLTKNIDQLKLQLVKDDAEMNSSQLNENTEFETSDSGGL 2249
            K+ALKRSIEAQRR+SL+LHVLKLT+N+++LKL+L +D   +    +  +T  +  +    
Sbjct: 686  KEALKRSIEAQRRKSLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQQGKEGIDE 745

Query: 2250 VKYFHNXXXXXXXXXXXXXXXHTCVDAS----------NYSEETI----QLHKLMDTGSK 2387
            ++   +                TC++ +           +S  TI     +++L  T   
Sbjct: 746  IQTTGSLKLVADSACLTHAENSTCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDV 805

Query: 2388 YVGPAETELKSSLEPKFRRKHSNTLQSEESDTD---GSDFTSSAVKSLSQDGVTSSVIDD 2558
            ++     +  +++ P F             DT+   G+    S   SLS  G ++S   D
Sbjct: 806  FLIHNGDQSNATVRPSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLS--GESNSGTSD 863

Query: 2559 AEAHVSGDELIDSSLELEREKLDPSVHRAIEKASNLVVPFKAAPLSNRDRLLLRKQALKM 2738
            A  HV+ ++    S+ LE EK  P +            P     LSN++RLLLR+QALKM
Sbjct: 864  AVHHVAMNKDTKPSVRLEEEKSPPLLSSTRINQPG-YFPANVPQLSNKERLLLRRQALKM 922

Query: 2739 RRRPVLAIGRSNIVTGVAKTIKTHFQKNPLAIVNIKGRAEGTSIQEVIFKLEQATGAVLV 2918
            ++ PVL++G+SN++TGVAK IK HF+K+ LAIVN+KGRA+GTS+QE++FKLEQATGAVLV
Sbjct: 923  KKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLV 982

Query: 2919 SQETNKVILYRGWGMEEGQGGVKDKRNTRTTAGREHNTQEVVSSRLMEAIRLECGL 3086
            SQE +KVILYRGW  E       D++   T        +  +SS LM AIR+ECGL
Sbjct: 983  SQEPSKVILYRGWEEE-------DRKQKATMMKNSGEDRLSMSSELMAAIRIECGL 1031