BLASTX nr result

ID: Cimicifuga21_contig00011253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011253
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV92018.1| WRKY transcription factor 16 [(Populus tomentosa ...    72   5e-11
ref|XP_002310609.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002310610.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002307134.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_004174140.1| PREDICTED: probable WRKY transcription facto...    67   2e-09

>gb|ACV92018.1| WRKY transcription factor 16 [(Populus tomentosa x P. bolleana) x
           P. tomentosa]
          Length = 191

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
 Frame = +3

Query: 105 PNTGYTYIMDHLDLSDFEI--SDFLLTEPGSEEDSTSTTNPNIESVTSNAVFPEQSDETV 278
           P+  Y+Y  + LD    E+  SD+L+ + G  EDS+S    + E V S +        + 
Sbjct: 10  PSCNYSYTNEGLDPWTIELQPSDYLMLDDGFGEDSSSQNMVSSEQVASGS--------ST 61

Query: 279 AYDGGDSKRRTCDMQRKQKSGEKKTKTGEMFRVAFRTKSELEVMDDGYKW 428
            Y G  S+  +     K K+G  K KT E  RVAFRTKS+LE+MDDGYKW
Sbjct: 62  GYSGATSRNNSI----KCKNGVNKNKTEEEHRVAFRTKSDLEIMDDGYKW 107


>ref|XP_002310609.1| predicted protein [Populus trichocarpa] gi|222853512|gb|EEE91059.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
 Frame = +3

Query: 105 PNTGYTYIMDHLD--LSDFEISDFLLTEPGSEEDSTSTTNPNIESVTSNAVFPEQ--SDE 272
           P+  Y+YI + LD    +F+ SD+L+ + G  ED +S+          N V PEQ  S  
Sbjct: 10  PSYNYSYINEGLDPWAIEFQPSDYLMLDDGFGEDDSSS---------QNMVSPEQVASGS 60

Query: 273 TVAYDGGDSKRRTCDMQRKQKSGEKKTKTGEMFRVAFRTKSELEVMDDGYKW 428
           +  Y G  S+  +       ++G KK KT    RVAFRTKSELE+MDDG+KW
Sbjct: 61  STGYSGATSRNNS------MQNGVKKNKTEVEHRVAFRTKSELEIMDDGFKW 106


>ref|XP_002310610.1| predicted protein [Populus trichocarpa] gi|222853513|gb|EEE91060.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
 Frame = +3

Query: 105 PNTGYTYIMDHLD--LSDFEISDFLLTEPGSEEDSTSTTNPNIESVTSNAVFPEQSDETV 278
           P+  Y+YI + LD    +F+ SD+L+ + G  ED +S+ N     V+S  V    S  + 
Sbjct: 10  PSYNYSYINEGLDPWAIEFQPSDYLMLDDGFGEDDSSSQN----MVSSEQV---ASGSST 62

Query: 279 AYDGGDSKRRTCDMQRKQKSGEKKTKTGEMFRVAFRTKSELEVMDDGYKW 428
            Y G  S+  +       ++G KK KT    RVAFRTKSELE+MDDG+KW
Sbjct: 63  GYSGATSRNNS------MQNGVKKNKTEVEHRVAFRTKSELEIMDDGFKW 106


>ref|XP_002307134.1| predicted protein [Populus trichocarpa] gi|222856583|gb|EEE94130.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
 Frame = +3

Query: 105 PNTGYTYIMDHLD--LSDFEISDFLLTEPGSEEDSTSTTNPNIESVTSNAVFPEQSDETV 278
           PN  ++Y  +  D   ++F++SD+L+ + G  ED++S+     +S+ S+   P  S    
Sbjct: 8   PNHDFSYFNEGFDPPATEFQVSDYLMLDDGFGEDNSSS-----QSMASSEQVPSGSSS-- 60

Query: 279 AYDGGDSKRRTCDMQRKQKSGEKKTKTGEMFRVAFRTKSELEVMDDGYKW 428
            Y G  S+  +       ++G KK K     RVAFRTKSELEVMDDG+KW
Sbjct: 61  GYSGATSRNNS------MQNGVKKNKIEGGHRVAFRTKSELEVMDDGFKW 104


>ref|XP_004174140.1| PREDICTED: probable WRKY transcription factor 51-like, partial
           [Cucumis sativus]
          Length = 147

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
 Frame = +3

Query: 57  MSGYTSLPTNITADSLPN--TGYTYIMDHLDLSDFEISDFLLTEPGSE--EDSTSTTNPN 224
           M+ +    +N+  +  PN  T +  I+D     DFE+SDFLL    +    D  ++++P+
Sbjct: 1   MASFPYEDSNLNPNPNPNNYTHFPPILDPASFFDFELSDFLLFGDDNNIVVDQVASSSPS 60

Query: 225 I---ESVTSNAVFPEQSDETVAYDGGDS----KRRTCDMQRKQKSGEKKTKTGEM-FRVA 380
           +   E +TS  V  +    +   D G S             + K+GEKK K GEM  RVA
Sbjct: 61  MTSSEKITSGGV--DSGGSSTVIDTGSSVVVSSSGASTTSIRSKNGEKKRK-GEMGCRVA 117

Query: 381 FRTKSELEVMDDGYKW 428
           FRTKSE E+MDDGYKW
Sbjct: 118 FRTKSEQEIMDDGYKW 133


Top