BLASTX nr result

ID: Cimicifuga21_contig00011236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011236
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284383.1| PREDICTED: oxysterol-binding protein-related...   143   3e-32
ref|XP_002307418.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
ref|XP_002301011.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_003544769.1| PREDICTED: oxysterol-binding protein-related...   134   2e-29
ref|XP_003544768.1| PREDICTED: oxysterol-binding protein-related...   134   2e-29

>ref|XP_002284383.1| PREDICTED: oxysterol-binding protein-related protein 1C [Vitis
           vinifera] gi|302141870|emb|CBI19073.3| unnamed protein
           product [Vitis vinifera]
          Length = 797

 Score =  143 bits (360), Expect = 3e-32
 Identities = 83/166 (50%), Positives = 104/166 (62%), Gaps = 27/166 (16%)
 Frame = +2

Query: 230 MHPLCCISTVEN------STSFPNFH-----------SMKPESANHSRESSIH----ITE 346
           MHP CCI+TV +      S S P FH            ++ +S N S   + +    IT+
Sbjct: 1   MHPFCCITTVSDPNSGKPSHSLPEFHMSPLPPAVGGGGVRSDSGNRSNNLNHNHGNNITD 60

Query: 347 NGNGNSVMFNEAQM-GDHRDVMKIN-----GICGILHKWVNYGKGWRPRWFVLQDGVLSY 508
           +G     M     + GD R+V KIN     GI GIL+KWVNYGKGWRPRWFVLQDGVLSY
Sbjct: 61  HGRLTESMSRPPSICGDQREV-KINDIVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSY 119

Query: 509 YKIHGPDRIQLNQDTGKGSKVIGEESLRRLSPKKHNNGHGHNQSHP 646
           YKIHGPD+I +NQ+T KGSKVIGEESLRR++  +H NG+   + +P
Sbjct: 120 YKIHGPDKIIVNQETEKGSKVIGEESLRRIN--RHRNGNSQLRRNP 163


>ref|XP_002307418.1| predicted protein [Populus trichocarpa] gi|222856867|gb|EEE94414.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  137 bits (344), Expect = 2e-30
 Identities = 78/180 (43%), Positives = 102/180 (56%), Gaps = 41/180 (22%)
 Frame = +2

Query: 230 MHPLCCISTVEN-------------STSFPNFHSMKPESANHSRESSIHITEN------- 349
           MHPLCCISTV +             S   P   +++P++ N +  ++ H + +       
Sbjct: 1   MHPLCCISTVSDHSPANLSMAVTVRSNPDPGSTTVQPQNQNQNHNNTSHFSNHHHHNHST 60

Query: 350 ----GNGNSVMFNEAQMGDHRDV------------MKIN-----GICGILHKWVNYGKGW 466
                + N    N+     H+ V            +KIN     GI GIL+KWVNYGKGW
Sbjct: 61  ASYCSSNNGTDCNKNNRMSHQRVSSAREQPLIQVDVKINDIVGNGISGILYKWVNYGKGW 120

Query: 467 RPRWFVLQDGVLSYYKIHGPDRIQLNQDTGKGSKVIGEESLRRLSPKKHNNGHGHNQSHP 646
           RPRWFVLQDGVLSYYKIHGPD+I +NQ+T KGSK+IGEES+RR+S  K  NG+  N+  P
Sbjct: 121 RPRWFVLQDGVLSYYKIHGPDKILVNQETEKGSKIIGEESMRRISRPK--NGNSQNRRKP 178


>ref|XP_002301011.1| predicted protein [Populus trichocarpa] gi|222842737|gb|EEE80284.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score =  134 bits (338), Expect = 1e-29
 Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 38/177 (21%)
 Frame = +2

Query: 230 MHPLCCISTVEN-----------STSFPNFHSMKP----ESANHSRESSIHITEN----- 349
           MHPLCCISTV +           + S P   ++ P    +  NH++ ++ H + +     
Sbjct: 1   MHPLCCISTVSDHSPANLSMAVTARSDPGSTTVHPQIQIQIQNHNQHNTNHFSNHHHHNH 60

Query: 350 ------GNGNSVMFNEAQMGDHRDVMKI------------NGICGILHKWVNYGKGWRPR 475
                  + N    N++    H+    +            NGI G+L+KWVNYGKGWRPR
Sbjct: 61  STASNCSSSNGTDGNKSNRTSHQREQPLVQVDVKINDIVGNGISGVLYKWVNYGKGWRPR 120

Query: 476 WFVLQDGVLSYYKIHGPDRIQLNQDTGKGSKVIGEESLRRLSPKKHNNGHGHNQSHP 646
           WFVLQDGVLSYYKIHGPD+I +NQ+T KGSKVIGEES+RR+S  K  NG+  N+  P
Sbjct: 121 WFVLQDGVLSYYKIHGPDKIFVNQETEKGSKVIGEESMRRISRPK--NGNSQNRRKP 175


>ref|XP_003544769.1| PREDICTED: oxysterol-binding protein-related protein 1C-like
           isoform 2 [Glycine max]
          Length = 771

 Score =  134 bits (336), Expect = 2e-29
 Identities = 69/145 (47%), Positives = 92/145 (63%), Gaps = 6/145 (4%)
 Frame = +2

Query: 230 MHPLCCISTVENSTS-----FPNFHSMKPESANHSRESSIHITENGNGNSVMFNEAQMGD 394
           MHP CC+S V +++S      P   + + +SA    +  + ++  G         A   D
Sbjct: 1   MHPFCCVSAVSDNSSPAMPPLPAAAAARSDSAPRPSQLHLCLSNGGESGRTSLAPAPAVD 60

Query: 395 HR-DVMKINGICGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDRIQLNQDTGKGSKV 571
            R + +  NGI GILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPD+I +N +T KGSKV
Sbjct: 61  VRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNSETEKGSKV 120

Query: 572 IGEESLRRLSPKKHNNGHGHNQSHP 646
           IG+ES R +S +  N+ H +++  P
Sbjct: 121 IGDESARMIS-RNRNSTHVNHRRKP 144


>ref|XP_003544768.1| PREDICTED: oxysterol-binding protein-related protein 1C-like
           isoform 1 [Glycine max]
          Length = 781

 Score =  134 bits (336), Expect = 2e-29
 Identities = 69/145 (47%), Positives = 92/145 (63%), Gaps = 6/145 (4%)
 Frame = +2

Query: 230 MHPLCCISTVENSTS-----FPNFHSMKPESANHSRESSIHITENGNGNSVMFNEAQMGD 394
           MHP CC+S V +++S      P   + + +SA    +  + ++  G         A   D
Sbjct: 1   MHPFCCVSAVSDNSSPAMPPLPAAAAARSDSAPRPSQLHLCLSNGGESGRTSLAPAPAVD 60

Query: 395 HR-DVMKINGICGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDRIQLNQDTGKGSKV 571
            R + +  NGI GILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPD+I +N +T KGSKV
Sbjct: 61  VRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNSETEKGSKV 120

Query: 572 IGEESLRRLSPKKHNNGHGHNQSHP 646
           IG+ES R +S +  N+ H +++  P
Sbjct: 121 IGDESARMIS-RNRNSTHVNHRRKP 144


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