BLASTX nr result

ID: Cimicifuga21_contig00011227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011227
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612169.1| F-box family protein [Medicago truncatula] g...    57   4e-06

>ref|XP_003612169.1| F-box family protein [Medicago truncatula]
           gi|355513504|gb|AES95127.1| F-box family protein
           [Medicago truncatula]
          Length = 1154

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
 Frame = -1

Query: 679 YGVFLNGFLHWLCFNNNTKSVACIRVFDTETQETRGYYLPRFIVGEN-----CNRVYFGE 515
           Y  ++NG LHW+ F +  +S+ C   F  E++  + +  P     +N       R+  GE
Sbjct: 282 YPTYVNGALHWIRFEDEERSILC---FCFESERLQSFPSPPVFQNQNNGFRRNERIRMGE 338

Query: 514 LGGLLSIAFDCPSRESLEVWQMEDYEEG-TWILGYKI---------PRPQCCASCRSISR 365
           L GLL I  D  S   + +W M +Y+ G +W   Y I         P  Q    C  +  
Sbjct: 339 LRGLLYIC-DTYSFRDVAMWVMNEYDIGESWTKVYNIDTLISPLGRPDSQRYGLCWPVKN 397

Query: 364 LEPLGVLRNGNVLVNFQGIHGGFFSYEPRNQVLVEFLKDGLPNRY-EVIPHTATFLPLSD 188
            E       G  ++ +   +   + YEP+      F   G+ + + E+IPH  + + L D
Sbjct: 398 FE------EGAAILLYHSCNCLIY-YEPKKHAFKVFRIHGISSEFVEIIPHVPSLISLKD 450

Query: 187 VL 182
           V+
Sbjct: 451 VV 452


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