BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011201
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]      154   2e-35
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]      154   2e-35
ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Popu...   152   5e-35
ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...   150   3e-34
ref|XP_002312650.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33

>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  154 bits (389), Expect = 2e-35
 Identities = 91/168 (54%), Positives = 107/168 (63%), Gaps = 1/168 (0%)
 Frame = +3

Query: 39  LTGTAIAGAMFSSLSCCDPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 218
           LTGTAIAGA+F++LS C+PAFAAQQIA+IAEGDNRG               +NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALN 116

Query: 219 QINRMR-SKGVIIXXXXXXXAASSFVSTPSASAASEVAMIAEASSDNRGXXXXXXXSPAL 395
           QINRMR +KGVI+       AAS F+STP AS ASE+AMIAEA+SDNRG           
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPDAS-ASEIAMIAEATSDNRG----------- 164

Query: 396 AWXXXXXXXXXXXXXXXXXXXXVSPALAWVLFNILQPALNQINKMKSE 539
                                 V+PA+ WVL+NILQPALNQINKM+S+
Sbjct: 165 ----------------TLLLIVVAPAILWVLYNILQPALNQINKMRSQ 196


>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  154 bits (389), Expect = 2e-35
 Identities = 91/168 (54%), Positives = 107/168 (63%), Gaps = 1/168 (0%)
 Frame = +3

Query: 39  LTGTAIAGAMFSSLSCCDPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 218
           LTGTAIAGA+F++LS C+PAFAAQQIA+IAEGDNRG               +NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALN 116

Query: 219 QINRMR-SKGVIIXXXXXXXAASSFVSTPSASAASEVAMIAEASSDNRGXXXXXXXSPAL 395
           QINRMR +KGVI+       AAS F+STP AS ASE+AMIAEA+SDNRG           
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPDAS-ASEIAMIAEAASDNRG----------- 164

Query: 396 AWXXXXXXXXXXXXXXXXXXXXVSPALAWVLFNILQPALNQINKMKSE 539
                                 V+PA+ WVL+NILQPALNQINKM+S+
Sbjct: 165 ----------------TLLLIVVAPAILWVLYNILQPALNQINKMRSQ 196


>ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           hypothetical protein POPTRDRAFT_726168 [Populus
           trichocarpa]
          Length = 196

 Score =  152 bits (385), Expect = 5e-35
 Identities = 90/168 (53%), Positives = 107/168 (63%), Gaps = 1/168 (0%)
 Frame = +3

Query: 39  LTGTAIAGAMFSSLSCCDPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 218
           LTGTAIAGA+F++LS C+PAFAAQQIA+IAEGDNRG               +NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALN 116

Query: 219 QINRMR-SKGVIIXXXXXXXAASSFVSTPSASAASEVAMIAEASSDNRGXXXXXXXSPAL 395
           QINRMR +KGVI+       AAS F+STP AS ASE+AMIA+A+SDNRG           
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPHAS-ASEIAMIADATSDNRG----------- 164

Query: 396 AWXXXXXXXXXXXXXXXXXXXXVSPALAWVLFNILQPALNQINKMKSE 539
                                 V+PA+ WVL+NILQPALNQINKM+S+
Sbjct: 165 ----------------TLLLIVVAPAILWVLYNILQPALNQINKMRSQ 196


>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score =  150 bits (378), Expect = 3e-34
 Identities = 92/180 (51%), Positives = 111/180 (61%), Gaps = 2/180 (1%)
 Frame = +3

Query: 6   KSSEKLNFTSSLTGTAIAGAMFSSLSCCDPAFAAQQIADIAEGDNRGXXXXXXXXXXXXX 185
           KSSE  N ++SL GTAIAGA+FS+LS CDPA AAQQIA+IA+GDNRG             
Sbjct: 50  KSSENQNLSTSLAGTAIAGAIFSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAW 109

Query: 186 XXYNILQPALNQINRMRS-KGVIIXXXXXXXAASSFVSTPSASAASEVAMIAE-ASSDNR 359
             +NILQPALNQ+N+MRS KGVII       AAS F+ TP AS ASE+A +A+ ASSDNR
Sbjct: 110 VLFNILQPALNQLNKMRSTKGVIIGLGLGGLAASGFMLTPHAS-ASEIATLADAASSDNR 168

Query: 360 GXXXXXXXSPALAWXXXXXXXXXXXXXXXXXXXXVSPALAWVLFNILQPALNQINKMKSE 539
           G                                 V+PA+ WVL+NILQPALNQ+N+M+SE
Sbjct: 169 G---------------------------QLLLFVVTPAILWVLYNILQPALNQLNRMRSE 201


>ref|XP_002312650.1| predicted protein [Populus trichocarpa] gi|222852470|gb|EEE90017.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  147 bits (371), Expect = 2e-33
 Identities = 87/169 (51%), Positives = 107/169 (63%), Gaps = 1/169 (0%)
 Frame = +3

Query: 33  SSLTGTAIAGAMFSSLSCCDPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPA 212
           ++L GTAIAGA+F++LS C+PAFAAQQIA+IAEGDNRG               +NILQPA
Sbjct: 52  TALAGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPA 111

Query: 213 LNQINRMR-SKGVIIXXXXXXXAASSFVSTPSASAASEVAMIAEASSDNRGXXXXXXXSP 389
           LNQ+NRMR ++GVII       AAS F+STP AS ASE+AMIAEA+SD+RG         
Sbjct: 112 LNQVNRMRETRGVIIGLGLGGLAASGFMSTPDAS-ASEIAMIAEATSDSRG--------- 161

Query: 390 ALAWXXXXXXXXXXXXXXXXXXXXVSPALAWVLFNILQPALNQINKMKS 536
                                   V+PA+ WVL+NILQPALNQIN+M+S
Sbjct: 162 ------------------TLLLLVVAPAILWVLYNILQPALNQINRMRS 192