BLASTX nr result

ID: Cimicifuga21_contig00011193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011193
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242611.1| uncharacterized protein LOC100816564 [Glycin...   346   6e-93
ref|XP_003524078.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   345   2e-92
ref|XP_002532357.1| Ubiquitin carboxyl-terminal hydrolase isozym...   344   2e-92
ref|XP_002303369.1| predicted protein [Populus trichocarpa] gi|2...   334   3e-89
ref|XP_002273584.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   333   4e-89

>ref|NP_001242611.1| uncharacterized protein LOC100816564 [Glycine max]
           gi|255645265|gb|ACU23130.1| unknown [Glycine max]
          Length = 236

 Score =  346 bits (888), Expect = 6e-93
 Identities = 175/235 (74%), Positives = 203/235 (86%)
 Frame = -2

Query: 919 TPDERPSAKRWLPLEANPEIMNQFXXXXXXXXXEAEFSDVYGLDDELLEMVPKPVLAVLF 740
           T DERPSAKRWLPLEANP++MNQF         EAE  DV+GLD+ELLEMVPKPVLAVLF
Sbjct: 3   TLDERPSAKRWLPLEANPDVMNQFLWGLGLPVDEAECGDVFGLDEELLEMVPKPVLAVLF 62

Query: 739 LFPITAETEAERILEKESVKKEASDKVYFLKQTVGNACGTIGLLHAIGNVTSEIKFVEGS 560
           L+PITA++E ER L++E+VKK+ S KVYF+KQTVGNACGTIGLLHA+GN+TSE+K VEGS
Sbjct: 63  LYPITAKSEEER-LQQENVKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGS 121

Query: 559 YLDKFFKSTAKMDPLQRAVFLEKDREMEAAHSVAATAGETEAPNINESVDTHFICFTCVD 380
           + DKFFKSTA MDPLQRAVFLE DREME AHSVAATAG+T A   +++VDTHFICF CVD
Sbjct: 122 FFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVA---SDNVDTHFICFACVD 178

Query: 379 GELYELDGRKSQPISHGASSPSSLLQDATRVIKAMIGKNPDSNNFNVIALSKKTE 215
           GELYELDGRKS PISHG SSPS+LL+DA +VI++MI KNP S NFNVIA+SKK++
Sbjct: 179 GELYELDGRKSGPISHGPSSPSTLLRDAAKVIQSMIRKNPGSLNFNVIAISKKSK 233


>ref|XP_003524078.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3
           [Glycine max] gi|255633042|gb|ACU16876.1| unknown
           [Glycine max]
          Length = 236

 Score =  345 bits (884), Expect = 2e-92
 Identities = 175/235 (74%), Positives = 202/235 (85%)
 Frame = -2

Query: 919 TPDERPSAKRWLPLEANPEIMNQFXXXXXXXXXEAEFSDVYGLDDELLEMVPKPVLAVLF 740
           T DERPSAKRWLPLEANPE+MNQF         EAE  DV+GLD+ELLEMVPKPVLAVLF
Sbjct: 3   TLDERPSAKRWLPLEANPEVMNQFLWGLGLPLDEAECCDVFGLDEELLEMVPKPVLAVLF 62

Query: 739 LFPITAETEAERILEKESVKKEASDKVYFLKQTVGNACGTIGLLHAIGNVTSEIKFVEGS 560
           L+PITA++E ER L++E+ KK+ S KVYF+KQTVGNACGTIGLLHA+GN+TSE+K VEGS
Sbjct: 63  LYPITAKSEEER-LQQENEKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGS 121

Query: 559 YLDKFFKSTAKMDPLQRAVFLEKDREMEAAHSVAATAGETEAPNINESVDTHFICFTCVD 380
           + DKFFKSTA MDPLQRAVFLE DREME AHSVAATAG+T A   +++VDTHFICF CVD
Sbjct: 122 FFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVA---SDNVDTHFICFACVD 178

Query: 379 GELYELDGRKSQPISHGASSPSSLLQDATRVIKAMIGKNPDSNNFNVIALSKKTE 215
           GELYELDGRKS PISHG SSPS+LL+DA +VI++MI KNP S NFNVIA+SKK++
Sbjct: 179 GELYELDGRKSGPISHGPSSPSTLLRDAAKVIQSMIQKNPGSLNFNVIAISKKSK 233


>ref|XP_002532357.1| Ubiquitin carboxyl-terminal hydrolase isozyme L3, putative [Ricinus
           communis] gi|223527944|gb|EEF30030.1| Ubiquitin
           carboxyl-terminal hydrolase isozyme L3, putative
           [Ricinus communis]
          Length = 236

 Score =  344 bits (883), Expect = 2e-92
 Identities = 174/238 (73%), Positives = 202/238 (84%)
 Frame = -2

Query: 919 TPDERPSAKRWLPLEANPEIMNQFXXXXXXXXXEAEFSDVYGLDDELLEMVPKPVLAVLF 740
           T DE PSAKRWLPLEANP++MNQF         EAE  DVYGLD+ELLEMVPKPVLAVLF
Sbjct: 3   TIDESPSAKRWLPLEANPDVMNQFLWGLGVVESEAECYDVYGLDEELLEMVPKPVLAVLF 62

Query: 739 LFPITAETEAERILEKESVKKEASDKVYFLKQTVGNACGTIGLLHAIGNVTSEIKFVEGS 560
           L+PIT ++E ER L++E VK+E S+KVYF+KQTVGNACGTIGLLHA+GN+TSEI  VE S
Sbjct: 63  LYPITPQSEEER-LQQEGVKQEPSNKVYFMKQTVGNACGTIGLLHAVGNITSEINLVEES 121

Query: 559 YLDKFFKSTAKMDPLQRAVFLEKDREMEAAHSVAATAGETEAPNINESVDTHFICFTCVD 380
           +LD+FFKSTA+MDP++RA FLE DREME AHSVAAT G+TEA   +++VDTHFICFTCV+
Sbjct: 122 FLDRFFKSTARMDPMERATFLENDREMEVAHSVAATGGDTEA---SDNVDTHFICFTCVE 178

Query: 379 GELYELDGRKSQPISHGASSPSSLLQDATRVIKAMIGKNPDSNNFNVIALSKKTEGAF 206
           G+L+ELDGRKS PISHGASS  SLLQDA +VI+ MI KNPDS NFNVIA+SKK EGAF
Sbjct: 179 GKLFELDGRKSGPISHGASSQGSLLQDAAKVIRDMIQKNPDSLNFNVIAISKKAEGAF 236


>ref|XP_002303369.1| predicted protein [Populus trichocarpa] gi|222840801|gb|EEE78348.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  334 bits (856), Expect = 3e-89
 Identities = 169/233 (72%), Positives = 195/233 (83%)
 Frame = -2

Query: 919 TPDERPSAKRWLPLEANPEIMNQFXXXXXXXXXEAEFSDVYGLDDELLEMVPKPVLAVLF 740
           T DE   AKRWLPLEANP++MNQF         EAE  DVYGLD+ELLEMVPKPVLAVLF
Sbjct: 3   TIDESAGAKRWLPLEANPDVMNQFLWGLGLPLDEAECCDVYGLDEELLEMVPKPVLAVLF 62

Query: 739 LFPITAETEAERILEKESVKKEASDKVYFLKQTVGNACGTIGLLHAIGNVTSEIKFVEGS 560
           L+PITA++EAERI ++ES++ + S KVYF+KQTVGNACGTIGLLHA+GN+TSEIK  +GS
Sbjct: 63  LYPITAQSEAERI-QQESIETDPSSKVYFMKQTVGNACGTIGLLHAVGNITSEIKLADGS 121

Query: 559 YLDKFFKSTAKMDPLQRAVFLEKDREMEAAHSVAATAGETEAPNINESVDTHFICFTCVD 380
           + D+FFKSTA MDPL+RA FLE DREME AHSVAAT G+TEA    E+VDTHFICFTCVD
Sbjct: 122 FFDRFFKSTANMDPLERARFLENDREMEDAHSVAATGGDTEA---TENVDTHFICFTCVD 178

Query: 379 GELYELDGRKSQPISHGASSPSSLLQDATRVIKAMIGKNPDSNNFNVIALSKK 221
           G+L+ELDGRKS PISHGASSP SLLQDA +VI+ MI KNP S NFNVIA+SK+
Sbjct: 179 GKLFELDGRKSGPISHGASSPGSLLQDAAKVIQGMIEKNPGSLNFNVIAISKR 231


>ref|XP_002273584.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Vitis
           vinifera] gi|296084646|emb|CBI25769.3| unnamed protein
           product [Vitis vinifera]
          Length = 236

 Score =  333 bits (855), Expect = 4e-89
 Identities = 167/238 (70%), Positives = 199/238 (83%)
 Frame = -2

Query: 919 TPDERPSAKRWLPLEANPEIMNQFXXXXXXXXXEAEFSDVYGLDDELLEMVPKPVLAVLF 740
           TPDE  SAK+WLPLEANP++MNQF         EAE  DVYGLD+ELL +VPKPVLAVLF
Sbjct: 3   TPDESSSAKKWLPLEANPDVMNQFLWGLGLLEDEAECYDVYGLDEELLAIVPKPVLAVLF 62

Query: 739 LFPITAETEAERILEKESVKKEASDKVYFLKQTVGNACGTIGLLHAIGNVTSEIKFVEGS 560
           L+PIT ++E ERIL+ +S K+E S+KVYF++QTVGNACGTIGLLHAIGNVTSEIK VEGS
Sbjct: 63  LYPITTQSEEERILQ-DSTKRETSNKVYFMRQTVGNACGTIGLLHAIGNVTSEIKLVEGS 121

Query: 559 YLDKFFKSTAKMDPLQRAVFLEKDREMEAAHSVAATAGETEAPNINESVDTHFICFTCVD 380
           +L++FFKSTA MDPL+RA +LE D+EME +HSVAATAG+TEA   + + D HFICF+CVD
Sbjct: 122 FLNRFFKSTASMDPLERAAYLENDQEMEVSHSVAATAGDTEA---STNADAHFICFSCVD 178

Query: 379 GELYELDGRKSQPISHGASSPSSLLQDATRVIKAMIGKNPDSNNFNVIALSKKTEGAF 206
           GELYELDGRKS  +SHG SSPS+LLQDA +VI+ +I KNPDS NFNVIA+SKK EG +
Sbjct: 179 GELYELDGRKSGAVSHGPSSPSTLLQDAAKVIQGIIQKNPDSINFNVIAISKKLEGPY 236


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