BLASTX nr result

ID: Cimicifuga21_contig00011186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011186
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529315.1| DNA binding protein, putative [Ricinus commu...   189   7e-46
ref|XP_002312579.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002284519.1| PREDICTED: putative DNA-binding protein ESCA...   179   8e-43
gb|ABZ89182.1| putative protein [Coffea canephora] gi|326367382|...   177   2e-42
gb|ADY38789.1| DNA-binding protein [Coffea arabica]                   175   9e-42

>ref|XP_002529315.1| DNA binding protein, putative [Ricinus communis]
           gi|223531239|gb|EEF33084.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 301

 Score =  189 bits (479), Expect = 7e-46
 Identities = 101/164 (61%), Positives = 110/164 (67%)
 Frame = +3

Query: 3   CVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLAXXXX 182
           CVLSGSG VANVTLRQP+AP AVVAL GRFEILSLTG+FLPGPAPPGSTGLTVYLA    
Sbjct: 137 CVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQG 196

Query: 183 XXXXXXXXXTLIAAGPVIVIAATFANATYERLPIEXXXXXXXXXXXXXXXXXXXXXXXXX 362
                    +LIAAGPV+VIAATFANATYERLP+E                         
Sbjct: 197 QVVGGSVVGSLIAAGPVMVIAATFANATYERLPLE--DDEEAASAGQGHIQGGSNNSPPP 254

Query: 363 XXXXXXXXXLPDLSSLPVYNMPPNLLPNGGHLNQDSYAWAHGRP 494
                    LPD S+LPVYN+PPNL+PNGG L  D+YAWAHGRP
Sbjct: 255 IGSTGQQPGLPDPSALPVYNLPPNLIPNGGQLGHDAYAWAHGRP 298


>ref|XP_002312579.1| predicted protein [Populus trichocarpa] gi|222852399|gb|EEE89946.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  181 bits (459), Expect = 2e-43
 Identities = 97/165 (58%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3   CVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLAXXXX 182
           CVLSGSG VANVTLRQP+AP AVVAL GRFEILSLTG+FLPGPAPPGSTGLTVYLA    
Sbjct: 25  CVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQG 84

Query: 183 XXXXXXXXXTLIAAGPVIVIAATFANATYERLPIEXXXXXXXXXXXXXXXXXXXXXXXXX 362
                    +L+AAGPV+VIAATFANATYERLP+E                         
Sbjct: 85  QVVGGSVVGSLVAAGPVMVIAATFANATYERLPLE------------------------D 120

Query: 363 XXXXXXXXXLPDLSSLPVYNMPPNLLPNGGH-LNQDSYAWAHGRP 494
                    LPD S++P+YN+PPNL+PNG H L  D+YAWAH RP
Sbjct: 121 DDEAGSGAGLPDPSAMPIYNLPPNLIPNGAHQLGHDAYAWAHARP 165


>ref|XP_002284519.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 260

 Score =  179 bits (453), Expect = 8e-43
 Identities = 96/164 (58%), Positives = 105/164 (64%)
 Frame = +3

Query: 3   CVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLAXXXX 182
           CVLSGSG VANVTLRQP+AP AVVAL GRFEILSLTG+FLPGPAPPGSTGLTVYLA    
Sbjct: 104 CVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQG 163

Query: 183 XXXXXXXXXTLIAAGPVIVIAATFANATYERLPIEXXXXXXXXXXXXXXXXXXXXXXXXX 362
                    +L+AAGPVIVIAATFANATYERLP+E                         
Sbjct: 164 QVVGGSVVGSLVAAGPVIVIAATFANATYERLPLEEEEEGGQAPPPSGSPPAIGSSGGQH 223

Query: 363 XXXXXXXXXLPDLSSLPVYNMPPNLLPNGGHLNQDSYAWAHGRP 494
                       L  LP+YN+PPNLLPNGG L+ D Y+WAH RP
Sbjct: 224 H---------SGLPELPIYNLPPNLLPNGGQLSHDPYSWAHARP 258


>gb|ABZ89182.1| putative protein [Coffea canephora] gi|326367382|gb|ADZ55300.1|
           DNA-binding protein [Coffea arabica]
          Length = 289

 Score =  177 bits (449), Expect = 2e-42
 Identities = 92/164 (56%), Positives = 108/164 (65%)
 Frame = +3

Query: 3   CVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLAXXXX 182
           CVLS SG V NVTLRQPSAP AV+AL GRFEILSLTG+FLPGPAPPG+TGLT+YLA    
Sbjct: 127 CVLSASGTVTNVTLRQPSAPGAVMALHGRFEILSLTGAFLPGPAPPGATGLTIYLAGGQG 186

Query: 183 XXXXXXXXXTLIAAGPVIVIAATFANATYERLPIEXXXXXXXXXXXXXXXXXXXXXXXXX 362
                    +L+A+GPV+VIA+TF+NATYERLPIE                         
Sbjct: 187 QVVGGSVVGSLVASGPVMVIASTFSNATYERLPIE---EDEEGGGAAQGQLGGNGSPPLG 243

Query: 363 XXXXXXXXXLPDLSSLPVYNMPPNLLPNGGHLNQDSYAWAHGRP 494
                    L D SS+PVYN+PPNL+PNGG LN +++AWAHGRP
Sbjct: 244 SGGAPQQGGLGDPSSMPVYNLPPNLMPNGGQLNHEAFAWAHGRP 287


>gb|ADY38789.1| DNA-binding protein [Coffea arabica]
          Length = 289

 Score =  175 bits (444), Expect = 9e-42
 Identities = 91/164 (55%), Positives = 108/164 (65%)
 Frame = +3

Query: 3   CVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLAXXXX 182
           CVLS SG V NVTLRQPSAP AV+AL GRFEILSLTG+FLPGPAPPG+TGLT+YLA    
Sbjct: 127 CVLSASGTVTNVTLRQPSAPGAVMALHGRFEILSLTGAFLPGPAPPGATGLTIYLAGGQG 186

Query: 183 XXXXXXXXXTLIAAGPVIVIAATFANATYERLPIEXXXXXXXXXXXXXXXXXXXXXXXXX 362
                    +L+A+GPV+VIA+TF+NATYERLPIE                         
Sbjct: 187 QVVGGSVVGSLVASGPVMVIASTFSNATYERLPIE---EDEEGGGAAQGQLGGNGSPPLG 243

Query: 363 XXXXXXXXXLPDLSSLPVYNMPPNLLPNGGHLNQDSYAWAHGRP 494
                    L D SS+PVY++PPNL+PNGG LN +++AWAHGRP
Sbjct: 244 SGGAPQQGGLGDPSSMPVYSLPPNLMPNGGQLNHEAFAWAHGRP 287


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