BLASTX nr result

ID: Cimicifuga21_contig00011161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011161
         (1314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis...   358   1e-96
emb|CBI34504.3| unnamed protein product [Vitis vinifera]              349   8e-94
ref|XP_002265246.1| PREDICTED: F-box protein SKIP8 [Vitis vinifera]   349   8e-94
ref|XP_002509987.1| conserved hypothetical protein [Ricinus comm...   345   1e-92
ref|XP_003524433.1| PREDICTED: F-box protein SKIP8-like [Glycine...   345   1e-92

>ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis sativus]
            gi|449506211|ref|XP_004162683.1| PREDICTED: F-box protein
            SKIP8-like [Cucumis sativus]
          Length = 313

 Score =  358 bits (920), Expect = 1e-96
 Identities = 170/225 (75%), Positives = 195/225 (86%), Gaps = 3/225 (1%)
 Frame = +3

Query: 360  FVNG---EKYESMPVLVEQQIGAGASMMEQLVPEITTHTLSYLDYPSLCRLSMTNSSMRK 530
            ++NG   E  E  PV+V ++   GASMMEQLVPEITTH LSYLDYPSLCRLSMTNS MRK
Sbjct: 90   YLNGRAVEVLEKAPVVVTER-QTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRK 148

Query: 531  AANDDSAWKALYHKDFTVEQDNVTPPNGWKAYYAATRAIVNVNAEFYNIIRDRSVQAMRR 710
            AANDD+AWKALYHKDFT+EQD VTP NGWK+YYAATR I+N+NA+FYNIIRDRS+QAM R
Sbjct: 149  AANDDNAWKALYHKDFTLEQDTVTPINGWKSYYAATRTIMNINAQFYNIIRDRSLQAMSR 208

Query: 711  FWLRADYVKCIHSSGELFTGYDAVVQSWQLAFDWGQGVAFQVRDVRARLLTDMAWVTMKT 890
            FWL ADYVKCIH+SGE F+GY+AVVQSWQ+AF+W QG+ FQVRDVRAR+LTDMAWV+MKT
Sbjct: 209  FWLNADYVKCIHASGEFFSGYNAVVQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKT 268

Query: 891  FVDMDTQPFQVTNVYEFHNGQWYMVHHHSSMMLADAALENQNVFG 1025
            +VDMDT PF VTN+YEFHNG+WYMVHHHSS+ML    +E Q V G
Sbjct: 269  YVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIVGEMEQQMVHG 313


>emb|CBI34504.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  349 bits (896), Expect = 8e-94
 Identities = 165/223 (73%), Positives = 193/223 (86%), Gaps = 1/223 (0%)
 Frame = +3

Query: 360  FVNGEKYESMP-VLVEQQIGAGASMMEQLVPEITTHTLSYLDYPSLCRLSMTNSSMRKAA 536
            ++NG   E +   LV  +   GASMMEQLVPEITTH LSYLDYPSLCRLSMTNS MRKAA
Sbjct: 104  YLNGGAEEMLDRALVVSERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAA 163

Query: 537  NDDSAWKALYHKDFTVEQDNVTPPNGWKAYYAATRAIVNVNAEFYNIIRDRSVQAMRRFW 716
            NDD+AWKALYHKDFT+EQD+VTP NGWKAYYAATRAIVN+NAEF+NIIR+RS+ +M R W
Sbjct: 164  NDDNAWKALYHKDFTLEQDSVTPTNGWKAYYAATRAIVNINAEFFNIIRERSITSMSRLW 223

Query: 717  LRADYVKCIHSSGELFTGYDAVVQSWQLAFDWGQGVAFQVRDVRARLLTDMAWVTMKTFV 896
              ADYVKC+H+SGELFTGY+AV++SWQLAF+W QGV FQVRDVRAR+LTDMAWVTMKTFV
Sbjct: 224  FNADYVKCVHASGELFTGYNAVIESWQLAFNWDQGVDFQVRDVRARVLTDMAWVTMKTFV 283

Query: 897  DMDTQPFQVTNVYEFHNGQWYMVHHHSSMMLADAALENQNVFG 1025
            DM+T PF VTNV+EFHNG+W+MVHHHSS+++ D  ++ Q V G
Sbjct: 284  DMETGPFNVTNVFEFHNGRWFMVHHHSSVLI-DGEVDQQIVNG 325


>ref|XP_002265246.1| PREDICTED: F-box protein SKIP8 [Vitis vinifera]
          Length = 307

 Score =  349 bits (896), Expect = 8e-94
 Identities = 165/223 (73%), Positives = 193/223 (86%), Gaps = 1/223 (0%)
 Frame = +3

Query: 360  FVNGEKYESMP-VLVEQQIGAGASMMEQLVPEITTHTLSYLDYPSLCRLSMTNSSMRKAA 536
            ++NG   E +   LV  +   GASMMEQLVPEITTH LSYLDYPSLCRLSMTNS MRKAA
Sbjct: 86   YLNGGAEEMLDRALVVSERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAA 145

Query: 537  NDDSAWKALYHKDFTVEQDNVTPPNGWKAYYAATRAIVNVNAEFYNIIRDRSVQAMRRFW 716
            NDD+AWKALYHKDFT+EQD+VTP NGWKAYYAATRAIVN+NAEF+NIIR+RS+ +M R W
Sbjct: 146  NDDNAWKALYHKDFTLEQDSVTPTNGWKAYYAATRAIVNINAEFFNIIRERSITSMSRLW 205

Query: 717  LRADYVKCIHSSGELFTGYDAVVQSWQLAFDWGQGVAFQVRDVRARLLTDMAWVTMKTFV 896
              ADYVKC+H+SGELFTGY+AV++SWQLAF+W QGV FQVRDVRAR+LTDMAWVTMKTFV
Sbjct: 206  FNADYVKCVHASGELFTGYNAVIESWQLAFNWDQGVDFQVRDVRARVLTDMAWVTMKTFV 265

Query: 897  DMDTQPFQVTNVYEFHNGQWYMVHHHSSMMLADAALENQNVFG 1025
            DM+T PF VTNV+EFHNG+W+MVHHHSS+++ D  ++ Q V G
Sbjct: 266  DMETGPFNVTNVFEFHNGRWFMVHHHSSVLI-DGEVDQQIVNG 307


>ref|XP_002509987.1| conserved hypothetical protein [Ricinus communis]
            gi|223549886|gb|EEF51374.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 302

 Score =  345 bits (886), Expect = 1e-92
 Identities = 159/200 (79%), Positives = 180/200 (90%)
 Frame = +3

Query: 420  GASMMEQLVPEITTHTLSYLDYPSLCRLSMTNSSMRKAANDDSAWKALYHKDFTVEQDNV 599
            GASMMEQLVPEITTH LSYLDYPSLCRLSMTNS MRKAANDD+AWKALYHKDFT+EQD V
Sbjct: 101  GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTV 160

Query: 600  TPPNGWKAYYAATRAIVNVNAEFYNIIRDRSVQAMRRFWLRADYVKCIHSSGELFTGYDA 779
            TP NGWKAYYA+TRAIVN N EF+N+I+DRS+QAM R WL ADYVKCIH+SGELF+GY+A
Sbjct: 161  TPVNGWKAYYASTRAIVNANTEFFNVIKDRSLQAMSRIWLNADYVKCIHASGELFSGYNA 220

Query: 780  VVQSWQLAFDWGQGVAFQVRDVRARLLTDMAWVTMKTFVDMDTQPFQVTNVYEFHNGQWY 959
            V+QSWQLAF+W QG+ FQVRDVRAR+LTDMAWVTMKT+ DMDT PF VTN++EFHN +WY
Sbjct: 221  VMQSWQLAFNWEQGLEFQVRDVRARVLTDMAWVTMKTYFDMDTGPFTVTNIFEFHNDRWY 280

Query: 960  MVHHHSSMMLADAALENQNV 1019
            MVHHHSS+ML D  ++ Q V
Sbjct: 281  MVHHHSSVMLIDGDVDQQIV 300


>ref|XP_003524433.1| PREDICTED: F-box protein SKIP8-like [Glycine max]
          Length = 286

 Score =  345 bits (885), Expect = 1e-92
 Identities = 160/204 (78%), Positives = 184/204 (90%)
 Frame = +3

Query: 393  VLVEQQIGAGASMMEQLVPEITTHTLSYLDYPSLCRLSMTNSSMRKAANDDSAWKALYHK 572
            VL E++   G+SMME+LVPEITTH LSYLDYPSLCRLSMTNS MRKAANDD+AWKALYHK
Sbjct: 80   VLTERR--TGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHK 137

Query: 573  DFTVEQDNVTPPNGWKAYYAATRAIVNVNAEFYNIIRDRSVQAMRRFWLRADYVKCIHSS 752
            DFT+EQD+VTP NGWKAYYAATRAIVN+N EF+NI+RD+S+QAM RFWL ADYVKCIH+S
Sbjct: 138  DFTLEQDSVTPTNGWKAYYAATRAIVNINTEFFNIVRDKSLQAMSRFWLNADYVKCIHAS 197

Query: 753  GELFTGYDAVVQSWQLAFDWGQGVAFQVRDVRARLLTDMAWVTMKTFVDMDTQPFQVTNV 932
            GELF+GY+AV+QSWQLAF+W QG+  QV+DVRAR+LTDMAWVTMKT+VDMDT PF VTN+
Sbjct: 198  GELFSGYNAVMQSWQLAFNWEQGLNTQVQDVRARILTDMAWVTMKTYVDMDTGPFNVTNI 257

Query: 933  YEFHNGQWYMVHHHSSMMLADAAL 1004
            YEFHNG+WYMVHHHS +M  D  L
Sbjct: 258  YEFHNGRWYMVHHHSCVMNGDVDL 281


Top