BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011148
         (1763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase...   830   0.0  
ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase...   825   0.0  
emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]   823   0.0  
ref|NP_001240152.1| ribulose bisphosphate carboxylase/oxygenase ...   815   0.0  
ref|XP_002524206.1| Ribulose bisphosphate carboxylase/oxygenase ...   811   0.0  

>ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
            chloroplastic-like [Vitis vinifera]
            gi|297740331|emb|CBI30513.3| unnamed protein product
            [Vitis vinifera]
          Length = 474

 Score =  830 bits (2145), Expect = 0.0
 Identities = 403/474 (85%), Positives = 440/474 (92%)
 Frame = +2

Query: 104  MVTAVSTAGATNVAPLSLHNSSPGASVPSSTFLGSSLKKLSCGYYHPRISSRSVRVVAEV 283
            M   +ST GA N APL+L+ S  GASVPSS FLG+SLKK+S    HPR SS + +VVAEV
Sbjct: 1    MAATISTLGAVNRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEV 60

Query: 284  DEKKQTGKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPSGAGTHDPIMTSYDYISTGLR 463
            DE+KQT KD+WKGLA+D SDDQQDITRGKGMVD LFQAP  +GTH  +M+SYDYISTGLR
Sbjct: 61   DEEKQTSKDKWKGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLR 120

Query: 464  EYSLDNNMDGFYIAPAFMDKLVVHITKNYLSLPNIKVPLILGIWGGKGQGKSFQCELVFA 643
            +Y+LDN MDGFYIAPAFMDKLVVHITKN+++LPNIKVPLILGIWGGKGQGKSFQCELVFA
Sbjct: 121  QYNLDNTMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFA 180

Query: 644  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGT 823
            KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCLFINDLDAGAGRLGGT
Sbjct: 181  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGT 240

Query: 824  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 1003
            TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 1004 EKFYWAPTREDRIGVCNGIFRTDNIHEKDIVKLVDTFPGQSIDFFGALRARVYDDEVKKW 1183
            EKFYWAPTREDRIGVC GIFR+DNI ++D+VKLVDTFPGQSIDFFGALRARVYDDEV+KW
Sbjct: 301  EKFYWAPTREDRIGVCTGIFRSDNIPKEDMVKLVDTFPGQSIDFFGALRARVYDDEVRKW 360

Query: 1184 IASVGVDNIGKNLVNSKEGPPTFDQPKMTLEKLLEYGSLLVQEQENVKRVQLADKYLSEA 1363
            +ASVGV+ IGK LVNSKEGPPTF++PKMTL+KLLEYG++LVQEQENVKRVQLADKYLSEA
Sbjct: 361  VASVGVEGIGKKLVNSKEGPPTFEKPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLSEA 420

Query: 1364 ALGEANEDSIERGTFYGKAAQQVNFPVPEGCADSSATNFDPTARSDDGTCLYQL 1525
            ALG+ANED+I+ G+FYGKAAQQVN PVPEGC D SA NFDPTARSDDG+CLYQ+
Sbjct: 421  ALGDANEDAIKSGSFYGKAAQQVNLPVPEGCTDPSANNFDPTARSDDGSCLYQI 474


>ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
            chloroplastic isoform 1 [Vitis vinifera]
            gi|297746032|emb|CBI16088.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  825 bits (2131), Expect = 0.0
 Identities = 400/472 (84%), Positives = 435/472 (92%)
 Frame = +2

Query: 104  MVTAVSTAGATNVAPLSLHNSSPGASVPSSTFLGSSLKKLSCGYYHPRISSRSVRVVAEV 283
            M T VST GA N  PLSL++S  GASVPSS F GSSLKK+S  + HP+I+S S +VVAE+
Sbjct: 1    MATTVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEI 60

Query: 284  DEKKQTGKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPSGAGTHDPIMTSYDYISTGLR 463
            DE +QT KDRWKGLAYD+SDDQQDITRGKGMVD LFQAP  +GTH  +M+SY+Y+STGLR
Sbjct: 61   DENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLR 120

Query: 464  EYSLDNNMDGFYIAPAFMDKLVVHITKNYLSLPNIKVPLILGIWGGKGQGKSFQCELVFA 643
            +Y+LDNNMDGFYIAPAFMDKLVVHITKN+++LPNIKVPLILGIWGGKGQGKSFQCELVF+
Sbjct: 121  QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFS 180

Query: 644  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGT 823
            KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCLFINDLDAGAGRLGGT
Sbjct: 181  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGT 240

Query: 824  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 1003
            TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 1004 EKFYWAPTREDRIGVCNGIFRTDNIHEKDIVKLVDTFPGQSIDFFGALRARVYDDEVKKW 1183
            EKFYWAP REDRIGVC GIFR+DN+ + DIVK+VDTFPGQSIDFFGALRARVYDDEV+KW
Sbjct: 301  EKFYWAPNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKW 360

Query: 1184 IASVGVDNIGKNLVNSKEGPPTFDQPKMTLEKLLEYGSLLVQEQENVKRVQLADKYLSEA 1363
            I+ VGVD IGK LVNSKEGPPTF+QPKMT+EKLLEYG++LV EQENVKRVQLADKYLSEA
Sbjct: 361  ISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLSEA 420

Query: 1364 ALGEANEDSIERGTFYGKAAQQVNFPVPEGCADSSATNFDPTARSDDGTCLY 1519
            ALG+AN DSIERGTFYGKAAQQV  PVPEGC D SA NFDPTARSD+G+C Y
Sbjct: 421  ALGDANVDSIERGTFYGKAAQQVGVPVPEGCTDPSAANFDPTARSDNGSCQY 472


>emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]
          Length = 472

 Score =  823 bits (2126), Expect = 0.0
 Identities = 399/472 (84%), Positives = 434/472 (91%)
 Frame = +2

Query: 104  MVTAVSTAGATNVAPLSLHNSSPGASVPSSTFLGSSLKKLSCGYYHPRISSRSVRVVAEV 283
            M T VST GA N  PLSL++S  G SVPSS F GSSLKK+S  + HP+I+S S +VVAE+
Sbjct: 1    MATTVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEI 60

Query: 284  DEKKQTGKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPSGAGTHDPIMTSYDYISTGLR 463
            DE +QT KDRWKGLAYD+SDDQQDITRGKGMVD LFQAP  +GTH  +M+SY+Y+STGLR
Sbjct: 61   DENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLR 120

Query: 464  EYSLDNNMDGFYIAPAFMDKLVVHITKNYLSLPNIKVPLILGIWGGKGQGKSFQCELVFA 643
            +Y+LDNNMDGFYIAPAFMDKLVVHITKN+++LPNIKVPLILGIWGGKGQGKSFQCELVF+
Sbjct: 121  QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFS 180

Query: 644  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGT 823
            KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCLFINDLDAGAGRLGGT
Sbjct: 181  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGT 240

Query: 824  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 1003
            TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 1004 EKFYWAPTREDRIGVCNGIFRTDNIHEKDIVKLVDTFPGQSIDFFGALRARVYDDEVKKW 1183
            EKFYWAP REDRIGVC GIFR+DN+ + DIVK+VDTFPGQSIDFFGALRARVYDDEV+KW
Sbjct: 301  EKFYWAPNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKW 360

Query: 1184 IASVGVDNIGKNLVNSKEGPPTFDQPKMTLEKLLEYGSLLVQEQENVKRVQLADKYLSEA 1363
            I+ VGVD IGK LVNSKEGPPTF+QPKMT+EKLLEYG++LV EQENVKRVQLADKYLSEA
Sbjct: 361  ISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLSEA 420

Query: 1364 ALGEANEDSIERGTFYGKAAQQVNFPVPEGCADSSATNFDPTARSDDGTCLY 1519
            ALG+AN DSIERGTFYGKAAQQV  PVPEGC D SA NFDPTARSD+G+C Y
Sbjct: 421  ALGDANVDSIERGTFYGKAAQQVGVPVPEGCTDPSAANFDPTARSDNGSCQY 472


>ref|NP_001240152.1| ribulose bisphosphate carboxylase/oxygenase activase 1,
            chloroplastic-like [Glycine max]
            gi|290766479|gb|ADD60242.1| alpha-form rubisco activase
            [Glycine max] gi|290766489|gb|ADD60247.1| alpha-form
            rubisco activase [Glycine max]
          Length = 478

 Score =  815 bits (2105), Expect = 0.0
 Identities = 400/476 (84%), Positives = 436/476 (91%), Gaps = 4/476 (0%)
 Frame = +2

Query: 104  MVTAVSTAGATNVAPLSLHNSSPGASVPSSTFLGSSLKKLSCGYY-HPRISSRSVRVVA- 277
            M  +VST GA N APLSL++S  GASVPSS F G+SLKK+      + +ISS S ++VA 
Sbjct: 1    MAASVSTVGAVNGAPLSLNSSGAGASVPSSAFFGTSLKKVIASRVPNVKISSGSFKIVAA 60

Query: 278  --EVDEKKQTGKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPSGAGTHDPIMTSYDYIS 451
              E+DEK+QT KDRWKGLAYD+SDDQQDITRGKG+VD LFQAP   GTH  IM+SY+Y+S
Sbjct: 61   EKEIDEKQQTDKDRWKGLAYDVSDDQQDITRGKGLVDSLFQAPQDTGTHYAIMSSYEYLS 120

Query: 452  TGLREYSLDNNMDGFYIAPAFMDKLVVHITKNYLSLPNIKVPLILGIWGGKGQGKSFQCE 631
            TGL++Y+LDNNMDGFYIAPAFMDKLVVHI+KN+++LPNIKVPLILGIWGGKGQGKSFQCE
Sbjct: 121  TGLKQYNLDNNMDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 180

Query: 632  LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR 811
            LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMC LFINDLDAGAGR
Sbjct: 181  LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCALFINDLDAGAGR 240

Query: 812  LGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIR 991
            LGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIR
Sbjct: 241  LGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIR 300

Query: 992  DGRMEKFYWAPTREDRIGVCNGIFRTDNIHEKDIVKLVDTFPGQSIDFFGALRARVYDDE 1171
            DGRMEKFYWAPTR+DR+GVCNGIFRTDN+ + DIVKLVDTFPGQSIDFFGALRARVYDDE
Sbjct: 301  DGRMEKFYWAPTRDDRVGVCNGIFRTDNVPKDDIVKLVDTFPGQSIDFFGALRARVYDDE 360

Query: 1172 VKKWIASVGVDNIGKNLVNSKEGPPTFDQPKMTLEKLLEYGSLLVQEQENVKRVQLADKY 1351
            V+KWI+ VGVD IGK LVNSKEGPPTFDQPKMTL KLLEYG++LVQEQENVKRVQLADKY
Sbjct: 361  VRKWISVVGVDFIGKKLVNSKEGPPTFDQPKMTLSKLLEYGNMLVQEQENVKRVQLADKY 420

Query: 1352 LSEAALGEANEDSIERGTFYGKAAQQVNFPVPEGCADSSATNFDPTARSDDGTCLY 1519
            L EAALG+AN+DSI RGTFYGKAAQQVN PVPEGC D +A+NFDPTARSDDGTCLY
Sbjct: 421  LKEAALGDANQDSINRGTFYGKAAQQVNIPVPEGCTDPNASNFDPTARSDDGTCLY 476


>ref|XP_002524206.1| Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast
            precursor, putative [Ricinus communis]
            gi|223536483|gb|EEF38130.1| Ribulose bisphosphate
            carboxylase/oxygenase activase 1, chloroplast precursor,
            putative [Ricinus communis]
          Length = 473

 Score =  811 bits (2096), Expect = 0.0
 Identities = 392/473 (82%), Positives = 432/473 (91%)
 Frame = +2

Query: 104  MVTAVSTAGATNVAPLSLHNSSPGASVPSSTFLGSSLKKLSCGYYHPRISSRSVRVVAEV 283
            M   +ST GA N  PL+L+ S  G+SVP+S F GSSLKKL+   +  + SS S +VV+E 
Sbjct: 1    MAATISTVGAVNRTPLALNGSGAGSSVPTSAFFGSSLKKLNSPRFS-KFSSGSFKVVSEY 59

Query: 284  DEKKQTGKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPSGAGTHDPIMTSYDYISTGLR 463
            DE+KQT  DRW GLAYD+SDDQQDITRGKGMVD LFQAP  AGTH  +M+SY+Y+STGLR
Sbjct: 60   DEEKQTSADRWGGLAYDMSDDQQDITRGKGMVDSLFQAPQDAGTHYAVMSSYEYLSTGLR 119

Query: 464  EYSLDNNMDGFYIAPAFMDKLVVHITKNYLSLPNIKVPLILGIWGGKGQGKSFQCELVFA 643
            +Y+LDNNMDGFYIAPAFMDKLVVHITKN+++LPNIK+PLILGIWGGKGQGKSFQCELVFA
Sbjct: 120  QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFA 179

Query: 644  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGT 823
            KMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGR+GGT
Sbjct: 180  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 239

Query: 824  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 1003
            TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 240  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 299

Query: 1004 EKFYWAPTREDRIGVCNGIFRTDNIHEKDIVKLVDTFPGQSIDFFGALRARVYDDEVKKW 1183
            EKFYWAPTREDRIGVC GIF+TD +  +D+VKLVDTFPGQSIDFFGALRARVYDDEV+KW
Sbjct: 300  EKFYWAPTREDRIGVCTGIFKTDGVAPEDVVKLVDTFPGQSIDFFGALRARVYDDEVRKW 359

Query: 1184 IASVGVDNIGKNLVNSKEGPPTFDQPKMTLEKLLEYGSLLVQEQENVKRVQLADKYLSEA 1363
            I  VGV+ IGK+LVNSKEGPPTF+QPKMT+EKLLEYG++LVQEQENVKRVQLADKY+SEA
Sbjct: 360  IGGVGVEKIGKSLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYMSEA 419

Query: 1364 ALGEANEDSIERGTFYGKAAQQVNFPVPEGCADSSATNFDPTARSDDGTCLYQ 1522
            ALGEAN+DSIERGTFYGKAAQQVN PVPEGC D +A NFDPTARSDDG+C Y+
Sbjct: 420  ALGEANQDSIERGTFYGKAAQQVNIPVPEGCTDPTAQNFDPTARSDDGSCTYK 472