BLASTX nr result

ID: Cimicifuga21_contig00011137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011137
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525153.1| protein with unknown function [Ricinus commu...   378   e-102
ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis...   375   e-101
ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana] g...   374   e-101
ref|XP_002325590.1| predicted protein [Populus trichocarpa] gi|2...   372   e-101
ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arab...   371   e-100

>ref|XP_002525153.1| protein with unknown function [Ricinus communis]
           gi|223535612|gb|EEF37280.1| protein with unknown
           function [Ricinus communis]
          Length = 216

 Score =  378 bits (970), Expect = e-102
 Identities = 198/229 (86%), Positives = 203/229 (88%)
 Frame = -2

Query: 899 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 720
           LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ
Sbjct: 13  LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72

Query: 719 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 540
           ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKADLRH
Sbjct: 73  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132

Query: 539 LRAVSTEDAKAFAERENNFFMETSALESLNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 360
           LRAV+TEDAKAFAERE+ FFMETSALESLNVENAFTEVLTQIYRVVSRKALD+GDDPAA 
Sbjct: 133 LRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAA- 191

Query: 359 PKGQXXXXXXXXXXXXXXXXXXXALPKGQTINVGKDDVSAVKKVGCCSS 213
                                   LPKGQTINVGKDDVSAVKKVGCCS+
Sbjct: 192 ------------------------LPKGQTINVGKDDVSAVKKVGCCSA 216


>ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
          Length = 217

 Score =  375 bits (963), Expect = e-101
 Identities = 200/230 (86%), Positives = 203/230 (88%), Gaps = 1/230 (0%)
 Frame = -2

Query: 899 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 720
           LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDKVVKAQIWDTAGQ
Sbjct: 13  LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72

Query: 719 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 540
           ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKADLRH
Sbjct: 73  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132

Query: 539 LRAVSTEDAKAFAERENNFFMETSALESLNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 360
           LRAVSTEDAKAFAERENNFFMETSALES+NVENAFTEVLTQIYRVVSRKALDIGDDPAA 
Sbjct: 133 LRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAA- 191

Query: 359 PKGQXXXXXXXXXXXXXXXXXXXALPKGQTINVG-KDDVSAVKKVGCCSS 213
                                   LPKGQTINVG KDDVSAVKKVGCCS+
Sbjct: 192 ------------------------LPKGQTINVGTKDDVSAVKKVGCCSA 217


>ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
           gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName:
           Full=Ras-related protein RABA1f; Short=AtRABA1f
           gi|10176913|dbj|BAB10106.1| GTP-binding protein,
           ras-like [Arabidopsis thaliana]
           gi|26452359|dbj|BAC43265.1| putative GTP-binding protein
           [Arabidopsis thaliana] gi|28950757|gb|AAO63302.1|
           At5g60860 [Arabidopsis thaliana]
           gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F
           [Arabidopsis thaliana]
          Length = 217

 Score =  374 bits (959), Expect = e-101
 Identities = 198/230 (86%), Positives = 202/230 (87%), Gaps = 1/230 (0%)
 Frame = -2

Query: 899 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 720
           LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK+VKAQIWDTAGQ
Sbjct: 13  LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72

Query: 719 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 540
           ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM VGNKADLRH
Sbjct: 73  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRH 132

Query: 539 LRAVSTEDAKAFAERENNFFMETSALESLNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 360
           LRAVSTEDAKAFAEREN FFMETSALES+NVENAFTEVL+QIYRVVSRKALDIGDDPAA 
Sbjct: 133 LRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAA- 191

Query: 359 PKGQXXXXXXXXXXXXXXXXXXXALPKGQTINVG-KDDVSAVKKVGCCSS 213
                                   LPKGQTINVG KDDVSAVKKVGCCS+
Sbjct: 192 ------------------------LPKGQTINVGSKDDVSAVKKVGCCSN 217


>ref|XP_002325590.1| predicted protein [Populus trichocarpa] gi|222862465|gb|EEE99971.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  372 bits (955), Expect = e-101
 Identities = 195/229 (85%), Positives = 201/229 (87%)
 Frame = -2

Query: 899 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 720
           LFK+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ
Sbjct: 13  LFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72

Query: 719 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 540
           ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKADLRH
Sbjct: 73  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132

Query: 539 LRAVSTEDAKAFAERENNFFMETSALESLNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 360
           LRAV+TEDA AFAEREN FFMETSALESLNVENAFTEVLTQI+RVVSRKALD+GDDPAA 
Sbjct: 133 LRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKALDVGDDPAA- 191

Query: 359 PKGQXXXXXXXXXXXXXXXXXXXALPKGQTINVGKDDVSAVKKVGCCSS 213
                                   LPKGQTI VGKDDVSAVKKVGCCS+
Sbjct: 192 ------------------------LPKGQTITVGKDDVSAVKKVGCCSA 216


>ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
           lyrata] gi|297310544|gb|EFH40968.1| hypothetical protein
           ARALYDRAFT_919325 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  371 bits (953), Expect = e-100
 Identities = 196/230 (85%), Positives = 202/230 (87%), Gaps = 1/230 (0%)
 Frame = -2

Query: 899 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 720
           LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK+VKAQIWDTAGQ
Sbjct: 13  LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72

Query: 719 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 540
           ERYRAITSAYYRGAVGALLVYDVTRHVTFEN+ERWLKELRDHTD+NIVIM VGNKADLRH
Sbjct: 73  ERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGNKADLRH 132

Query: 539 LRAVSTEDAKAFAERENNFFMETSALESLNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 360
           LRAVSTEDAKAFAEREN FFMETSALES+NVENAFTEVL+QIYRVVSRKALDIGDDPAA 
Sbjct: 133 LRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAA- 191

Query: 359 PKGQXXXXXXXXXXXXXXXXXXXALPKGQTINVG-KDDVSAVKKVGCCSS 213
                                   LPKGQTINVG KDDVSAVKKVGCCS+
Sbjct: 192 ------------------------LPKGQTINVGSKDDVSAVKKVGCCSN 217


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