BLASTX nr result

ID: Cimicifuga21_contig00011131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011131
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635532.1| PREDICTED: 50S ribosomal protein L25-like [V...   303   5e-80
ref|XP_002263685.2| PREDICTED: 50S ribosomal protein L25 [Vitis ...   303   6e-80
ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus...   302   1e-79
ref|XP_002310742.1| predicted protein [Populus trichocarpa] gi|2...   295   2e-77
ref|XP_004148437.1| PREDICTED: 50S ribosomal protein L25-like [C...   293   4e-77

>ref|XP_003635532.1| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
          Length = 251

 Score =  303 bits (776), Expect = 5e-80
 Identities = 152/240 (63%), Positives = 185/240 (77%), Gaps = 4/240 (1%)
 Frame = +3

Query: 69  MQRWWCAAGGGLKRAVLLRISRTKPLSSPASSYHTLQAIPREYTGNRISARDRAQGRIPT 248
           M RWW AA G L+ AV  R S       PA++YHT+QAI RE+TG+++SARDRAQGRIP 
Sbjct: 1   MSRWWGAAAGRLRTAVSNRRSLYLSSLPPAAAYHTIQAISREFTGSKVSARDRAQGRIPA 60

Query: 249 VVFSQHQ----EDPTKPVSRKQLLTTERKQINSILKSVELPFFCTTTFQLQIRAGAGSSH 416
           VVF+Q          + VSRK+LLTTERKQI +ILKSVE  F C+TTF LQIRAG+GSS 
Sbjct: 61  VVFAQQLLTGGNMNGRSVSRKRLLTTERKQIQAILKSVEPEFICSTTFPLQIRAGSGSSV 120

Query: 417 LLESGTVLPIKIHRDPETGNILNLVLVWANEGSEINVDVPIVFKGEAMSPGLKKGGYLQK 596
           LLESGTVLP+KIHRD  TG +LNLV  WA+EGSE+ VDVP+VFKGE + PGLKKGGYL +
Sbjct: 121 LLESGTVLPLKIHRDEATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNR 180

Query: 597 VRERLRYQCPVEHIPPKIEVDVSNLDVGDRVYVKDLEIHPSLKLLSRDEDEPLCKVRGTK 776
           +R  L++ CP EHIP KIEVDVSNLD+GDR+ + D+E+HPSLKLLS++E  P+CK+   K
Sbjct: 181 IRPSLKFLCPAEHIPSKIEVDVSNLDIGDRILMHDVEVHPSLKLLSKNETMPVCKIVAAK 240


>ref|XP_002263685.2| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
           gi|302144151|emb|CBI23278.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  303 bits (775), Expect = 6e-80
 Identities = 152/240 (63%), Positives = 185/240 (77%), Gaps = 4/240 (1%)
 Frame = +3

Query: 69  MQRWWCAAGGGLKRAVLLRISRTKPLSSPASSYHTLQAIPREYTGNRISARDRAQGRIPT 248
           M RWW AA G L+ AV    S     S PA++YHT+QAI RE+TG+++SARDRAQGRIP 
Sbjct: 1   MSRWWGAAAGRLRTAVSNPRSLYLSSSPPAAAYHTIQAISREFTGSKVSARDRAQGRIPA 60

Query: 249 VVFSQHQ----EDPTKPVSRKQLLTTERKQINSILKSVELPFFCTTTFQLQIRAGAGSSH 416
           VVF+Q          + VSRK+LLTTERKQI +ILKSVE  F C+TTF LQIRAG+GSS 
Sbjct: 61  VVFAQQLLTGGNINGRSVSRKRLLTTERKQIQAILKSVEPEFICSTTFPLQIRAGSGSSV 120

Query: 417 LLESGTVLPIKIHRDPETGNILNLVLVWANEGSEINVDVPIVFKGEAMSPGLKKGGYLQK 596
           LLESGTVLP+KIHRD  TG +LNLV  WA+EGSE+ VDVP+VFKGE + PGLKKGGYL +
Sbjct: 121 LLESGTVLPLKIHRDEATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNR 180

Query: 597 VRERLRYQCPVEHIPPKIEVDVSNLDVGDRVYVKDLEIHPSLKLLSRDEDEPLCKVRGTK 776
           +R  L++ CP EHIP KIEVDVSNLD+GDR+ + D+E+HPSLKLLS++E  P+CK+   K
Sbjct: 181 IRPSLKFLCPAEHIPSKIEVDVSNLDIGDRILMHDVEVHPSLKLLSKNETMPVCKIVAAK 240


>ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus communis]
           gi|223538402|gb|EEF40008.1| 50S ribosomal protein L25,
           putative [Ricinus communis]
          Length = 253

 Score =  302 bits (773), Expect = 1e-79
 Identities = 154/248 (62%), Positives = 193/248 (77%), Gaps = 3/248 (1%)
 Frame = +3

Query: 99  GLKRAVLLRISRTKPLSSPASSYHTLQAIPREYTGNRISARDRAQGRIPTVVFSQHQEDP 278
           GLK  V    S +  L+S +S YHT+QAIPRE TG+R++ARDRAQGRIP VVFSQ   D 
Sbjct: 7   GLKTVVQ---SSSPSLNSQSSFYHTIQAIPRECTGSRVAARDRAQGRIPAVVFSQSLLDK 63

Query: 279 ---TKPVSRKQLLTTERKQINSILKSVELPFFCTTTFQLQIRAGAGSSHLLESGTVLPIK 449
              ++ +SRKQLLTTERKQI SIL SVELPFFC+TTF LQIRAG+GSS L+ESGT+LPIK
Sbjct: 64  NPNSRSISRKQLLTTERKQIQSILTSVELPFFCSTTFNLQIRAGSGSSVLIESGTILPIK 123

Query: 450 IHRDPETGNILNLVLVWANEGSEINVDVPIVFKGEAMSPGLKKGGYLQKVRERLRYQCPV 629
           +HRD ETG ILNLV VWA++G+E+ VDVP++FKGE   PGLKKGG L ++R+ L+  CP 
Sbjct: 124 VHRDEETGKILNLVFVWADDGTELKVDVPLIFKGEEDCPGLKKGGKLNRIRKSLKVLCPA 183

Query: 630 EHIPPKIEVDVSNLDVGDRVYVKDLEIHPSLKLLSRDEDEPLCKVRGTKPKVLEPKTLKM 809
           EHIPPK+EVDVS+LD+GD+V + D+E+HPSLKLLS++E+ P+CK+  T  +  EP+T   
Sbjct: 184 EHIPPKLEVDVSSLDIGDKVSMGDVEVHPSLKLLSKNENIPICKIVSTDLESPEPETEPE 243

Query: 810 EVSEPMAA 833
              EP  A
Sbjct: 244 TEPEPEPA 251


>ref|XP_002310742.1| predicted protein [Populus trichocarpa] gi|222853645|gb|EEE91192.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  295 bits (754), Expect = 2e-77
 Identities = 153/259 (59%), Positives = 192/259 (74%), Gaps = 7/259 (2%)
 Frame = +3

Query: 69  MQRWWCAAGGGLKRAVLLRISRTKPLSSP----ASSYHTLQAIPREYTGNRISARDRAQG 236
           M +WW +    L+ A+    S  +PLS P    +S YHT+QAIPRE  G+R+SAR+R QG
Sbjct: 1   MAKWWRS----LRTAIQ---SPQQPLSPPQPFQSSRYHTIQAIPREVVGSRVSAREREQG 53

Query: 237 RIPTVVFSQHQED---PTKPVSRKQLLTTERKQINSILKSVELPFFCTTTFQLQIRAGAG 407
           RIP VVFSQ   D     +  SRK+LLTTE+KQI +ILKSVE+PFFC+TTF LQIRAG G
Sbjct: 54  RIPAVVFSQSLLDINPSNRYTSRKRLLTTEKKQILAILKSVEIPFFCSTTFPLQIRAGTG 113

Query: 408 SSHLLESGTVLPIKIHRDPETGNILNLVLVWANEGSEINVDVPIVFKGEAMSPGLKKGGY 587
           SS LLESGTVLPIKIHRD +TG ILNLV  WA+EG+E+ VDVP+VFKGE   PGLKKGG+
Sbjct: 114 SSVLLESGTVLPIKIHRDEKTGKILNLVFAWADEGTEMKVDVPVVFKGEENCPGLKKGGH 173

Query: 588 LQKVRERLRYQCPVEHIPPKIEVDVSNLDVGDRVYVKDLEIHPSLKLLSRDEDEPLCKVR 767
           L+ +R  L+Y CP EHIP KIEVD+SNLD+ D ++++D+E+H SLKLLS++E+ P+CK+ 
Sbjct: 174 LKMMRSTLKYLCPAEHIPQKIEVDISNLDIEDGLFMRDIEVHSSLKLLSKNENMPVCKIV 233

Query: 768 GTKPKVLEPKTLKMEVSEP 824
            T     EP  L +E  EP
Sbjct: 234 ATNLDTPEPAALNLESPEP 252


>ref|XP_004148437.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
           gi|449515688|ref|XP_004164880.1| PREDICTED: 50S
           ribosomal protein L25-like [Cucumis sativus]
          Length = 258

 Score =  293 bits (751), Expect = 4e-77
 Identities = 148/248 (59%), Positives = 187/248 (75%), Gaps = 4/248 (1%)
 Frame = +3

Query: 69  MQRWWCAAGGGLKRAVLLRI-SRTKPLSSPASSYHTLQAIPREYTGNRISARDRAQGRIP 245
           M  WW +A   L+ A      S + P SS  ++YHT+QAIPRE +G +IS++DRAQGRIP
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 246 TVVFSQHQEDPTK---PVSRKQLLTTERKQINSILKSVELPFFCTTTFQLQIRAGAGSSH 416
            VVFSQ   +        SRK LLTTERKQI+SILKSVELPFFC+T F+LQIRAG+GSS 
Sbjct: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120

Query: 417 LLESGTVLPIKIHRDPETGNILNLVLVWANEGSEINVDVPIVFKGEAMSPGLKKGGYLQK 596
           LLESG++LPIKIHR+ ETG I N+V VWA+EGSE+ VDVPIVFKGE   PGL+KGG L K
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 597 VRERLRYQCPVEHIPPKIEVDVSNLDVGDRVYVKDLEIHPSLKLLSRDEDEPLCKVRGTK 776
           +R  L+Y CP EHIP KIEVDVSNLD+GDR++++D+++H S+KLLS++E  P+CK+   K
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240

Query: 777 PKVLEPKT 800
            +    +T
Sbjct: 241 SETANTET 248


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