BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011084
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleo...   206   6e-51
ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein...   205   8e-51
ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycin...   204   2e-50
ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp....   203   3e-50
ref|XP_003630988.1| Small nuclear ribonucleoprotein-like protein...   203   4e-50

>ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Glycine max]
          Length = 108

 Score =  206 bits (523), Expect = 6e-51
 Identities = 105/109 (96%), Positives = 106/109 (97%), Gaps = 1/109 (0%)
 Frame = +1

Query: 124 MSR-MEEDTPVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 300
           MSR MEEDT VGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNM
Sbjct: 1   MSRPMEEDT-VGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 301 VLENVREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVLRNPK 447
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
           gi|355525009|gb|AET05463.1| Small nuclear
           ribonucleoprotein-like protein [Medicago truncatula]
           gi|388506390|gb|AFK41261.1| unknown [Medicago
           truncatula]
          Length = 108

 Score =  205 bits (522), Expect = 8e-51
 Identities = 101/108 (93%), Positives = 103/108 (95%)
 Frame = +1

Query: 124 MSRMEEDTPVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 303
           MSR  E+  VGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSRPMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 304 LENVREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVLRNPK 447
           LENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
           gi|255633912|gb|ACU17317.1| unknown [Glycine max]
          Length = 108

 Score =  204 bits (518), Expect = 2e-50
 Identities = 100/108 (92%), Positives = 102/108 (94%)
 Frame = +1

Query: 124 MSRMEEDTPVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 303
           MSR  E+   GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSRPMEEDAAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 304 LENVREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVLRNPK 447
           LENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324318|gb|EFH54739.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  203 bits (517), Expect = 3e-50
 Identities = 100/105 (95%), Positives = 101/105 (96%)
 Frame = +1

Query: 133 MEEDTPVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 312
           MEEDT  GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN
Sbjct: 5   MEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 64

Query: 313 VREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVLRNPK 447
           VREMWTEVPKTGKGKKKA PVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 65  VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_003630988.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
           gi|355525010|gb|AET05464.1| Small nuclear
           ribonucleoprotein-like protein [Medicago truncatula]
          Length = 104

 Score =  203 bits (516), Expect = 4e-50
 Identities = 101/105 (96%), Positives = 102/105 (97%)
 Frame = +1

Query: 133 MEEDTPVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 312
           MEED  VGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEEDA-VGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 59

Query: 313 VREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVLRNPK 447
           VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 104