BLASTX nr result

ID: Cimicifuga21_contig00011057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011057
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]   528   e-147
ref|XP_002281168.1| PREDICTED: ABC transporter I family member 2...   525   e-146
ref|XP_003633613.1| PREDICTED: ABC transporter I family member 2...   515   e-143
ref|XP_002308160.1| ABC transporter family protein [Populus tric...   499   e-139
ref|XP_004139526.1| PREDICTED: ABC transporter I family member 2...   495   e-138

>emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]
          Length = 329

 Score =  528 bits (1359), Expect = e-147
 Identities = 261/322 (81%), Positives = 281/322 (87%)
 Frame = +3

Query: 147  SKPTIEINNLKFTYPGIDGHPPPGSTPLIDNFSLSLQAGERCLLVGSNGAGKTTILKILG 326
            SKPT+EINNL+FTYPGIDG PPPGSTPLID+FSL+L +G+RCLLVGSNGAGKTTILKILG
Sbjct: 7    SKPTVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILG 66

Query: 327  GKHMVEPHMVRVLGRSAFHDTALISSGDLCYLGGEWRRDVAFAGFDVPIQMDIAAEKMIF 506
            GKHMVEPHMVRVLGRSAFHDTAL SSGDLCYLGGEWRRDVAFAGF+VPIQMD++AEKMIF
Sbjct: 67   GKHMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIF 126

Query: 507  GVSGIDPQRRAELLKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPYKVLLLDEITXXXXX 686
            GVSGIDPQRRAEL+KVLDIDLSWR+HKVSDGQRRRVQICMGLLKP+KVLLLDEIT     
Sbjct: 127  GVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDV 186

Query: 687  XXXXXXXKFLIKECQERGATIIYATHIFDGLENWPSHLVYVARGKLQLAMPMDKVKEISN 866
                   KFL KEC+ERGATIIYATHIFDGLENWPSHLVYVA GKLQLAMPM+KV+E+SN
Sbjct: 187  LARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEKVREMSN 246

Query: 867  LSLMRTVESWLXXXXXXXXXXXXXXXASGLPEFESKVDGSRVIGGPAGSATRVMNNGWAA 1046
            LSLMRTVESWL               A GLPEFES+V+GSRV G PA +A R +NNGWAA
Sbjct: 247  LSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPARAAVRALNNGWAA 306

Query: 1047 GRLHSTIAGEEVFLLSSNRVLR 1112
            GRLHSTIAGEE F LSSN VLR
Sbjct: 307  GRLHSTIAGEENFFLSSNSVLR 328


>ref|XP_002281168.1| PREDICTED: ABC transporter I family member 20 isoform 1 [Vitis
            vinifera] gi|296089817|emb|CBI39636.3| unnamed protein
            product [Vitis vinifera]
          Length = 329

 Score =  525 bits (1351), Expect = e-146
 Identities = 260/322 (80%), Positives = 280/322 (86%)
 Frame = +3

Query: 147  SKPTIEINNLKFTYPGIDGHPPPGSTPLIDNFSLSLQAGERCLLVGSNGAGKTTILKILG 326
            SK T+EINNL+FTYPGIDG PPPGSTPLID+FSL+L +G+RCLLVGSNGAGKTTILKILG
Sbjct: 7    SKQTVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILG 66

Query: 327  GKHMVEPHMVRVLGRSAFHDTALISSGDLCYLGGEWRRDVAFAGFDVPIQMDIAAEKMIF 506
            GKHMVEPHMVRVLGRSAFHDTAL SSGDLCYLGGEWRRDVAFAGF+VPIQMD++AEKMIF
Sbjct: 67   GKHMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIF 126

Query: 507  GVSGIDPQRRAELLKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPYKVLLLDEITXXXXX 686
            GVSGIDPQRRAEL+KVLDIDLSWR+HKVSDGQRRRVQICMGLLKP+KVLLLDEIT     
Sbjct: 127  GVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDV 186

Query: 687  XXXXXXXKFLIKECQERGATIIYATHIFDGLENWPSHLVYVARGKLQLAMPMDKVKEISN 866
                   KFL KEC+ERGATIIYATHIFDGLENWPSHLVYVA GKLQLAMPM+KV+E+SN
Sbjct: 187  LARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEKVREMSN 246

Query: 867  LSLMRTVESWLXXXXXXXXXXXXXXXASGLPEFESKVDGSRVIGGPAGSATRVMNNGWAA 1046
            LSLMRTVESWL               A GLPEFES+V+GSRV G PA +A R +NNGWAA
Sbjct: 247  LSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPARAAVRALNNGWAA 306

Query: 1047 GRLHSTIAGEEVFLLSSNRVLR 1112
            GRLHSTIAGEE F LSSN VLR
Sbjct: 307  GRLHSTIAGEENFFLSSNSVLR 328


>ref|XP_003633613.1| PREDICTED: ABC transporter I family member 20 isoform 2 [Vitis
            vinifera]
          Length = 343

 Score =  515 bits (1326), Expect = e-143
 Identities = 260/336 (77%), Positives = 280/336 (83%), Gaps = 14/336 (4%)
 Frame = +3

Query: 147  SKPTIEINNLKFTYPGIDGHPPPGSTPLIDNFSLSLQAGERCLLVGSNGAGKTTILKILG 326
            SK T+EINNL+FTYPGIDG PPPGSTPLID+FSL+L +G+RCLLVGSNGAGKTTILKILG
Sbjct: 7    SKQTVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILG 66

Query: 327  GKHMVEPHMVRVLGRSAFHDTALISSGDLCYLGGEWRRDVAFAGFDVPIQMDIAAEKMIF 506
            GKHMVEPHMVRVLGRSAFHDTAL SSGDLCYLGGEWRRDVAFAGF+VPIQMD++AEKMIF
Sbjct: 67   GKHMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIF 126

Query: 507  GVSGIDPQRRAELLKV--------------LDIDLSWRMHKVSDGQRRRVQICMGLLKPY 644
            GVSGIDPQRRAEL+KV              LDIDLSWR+HKVSDGQRRRVQICMGLLKP+
Sbjct: 127  GVSGIDPQRRAELIKVRCESETPKLQSCNVLDIDLSWRLHKVSDGQRRRVQICMGLLKPF 186

Query: 645  KVLLLDEITXXXXXXXXXXXXKFLIKECQERGATIIYATHIFDGLENWPSHLVYVARGKL 824
            KVLLLDEIT            KFL KEC+ERGATIIYATHIFDGLENWPSHLVYVA GKL
Sbjct: 187  KVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKL 246

Query: 825  QLAMPMDKVKEISNLSLMRTVESWLXXXXXXXXXXXXXXXASGLPEFESKVDGSRVIGGP 1004
            QLAMPM+KV+E+SNLSLMRTVESWL               A GLPEFES+V+GSRV G P
Sbjct: 247  QLAMPMEKVREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDP 306

Query: 1005 AGSATRVMNNGWAAGRLHSTIAGEEVFLLSSNRVLR 1112
            A +A R +NNGWAAGRLHSTIAGEE F LSSN VLR
Sbjct: 307  ARAAVRALNNGWAAGRLHSTIAGEENFFLSSNSVLR 342


>ref|XP_002308160.1| ABC transporter family protein [Populus trichocarpa]
            gi|222854136|gb|EEE91683.1| ABC transporter family
            protein [Populus trichocarpa]
          Length = 325

 Score =  499 bits (1285), Expect = e-139
 Identities = 248/321 (77%), Positives = 269/321 (83%)
 Frame = +3

Query: 150  KPTIEINNLKFTYPGIDGHPPPGSTPLIDNFSLSLQAGERCLLVGSNGAGKTTILKILGG 329
            +PTI IN L+FTYPGIDGHPPPGS PLID FSL+L +G+RCLLVGSNGAGKTTILKILGG
Sbjct: 5    EPTIVINGLRFTYPGIDGHPPPGSKPLIDEFSLNLNSGDRCLLVGSNGAGKTTILKILGG 64

Query: 330  KHMVEPHMVRVLGRSAFHDTALISSGDLCYLGGEWRRDVAFAGFDVPIQMDIAAEKMIFG 509
            KHMVEP MVRVLGRSAFHDTAL SSG L YLGGEWRR+VAFAGF+VPIQMDI+AEKMIFG
Sbjct: 65   KHMVEPQMVRVLGRSAFHDTALTSSGHLSYLGGEWRREVAFAGFEVPIQMDISAEKMIFG 124

Query: 510  VSGIDPQRRAELLKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPYKVLLLDEITXXXXXX 689
            V+GIDPQRRAEL+KVLDIDLSWRMHKVSDGQRRRVQICMGLL+P+KVLLLDEIT      
Sbjct: 125  VAGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLRPFKVLLLDEITVDLDVL 184

Query: 690  XXXXXXKFLIKECQERGATIIYATHIFDGLENWPSHLVYVARGKLQLAMPMDKVKEISNL 869
                  KFL KEC+ERGATIIYATHIFDGLE WP+H++YVA GKLQ A+PM K+KE SNL
Sbjct: 185  ARADLLKFLRKECEERGATIIYATHIFDGLEEWPTHILYVAHGKLQFALPMAKIKETSNL 244

Query: 870  SLMRTVESWLXXXXXXXXXXXXXXXASGLPEFESKVDGSRVIGGPAGSATRVMNNGWAAG 1049
            SLMRTVESWL               A GLPE+E +V+GSRV G PA    RVMNNGWAAG
Sbjct: 245  SLMRTVESWLRKERDEERKRRQERKAGGLPEYEKQVEGSRVTGDPARVGARVMNNGWAAG 304

Query: 1050 RLHSTIAGEEVFLLSSNRVLR 1112
            RLHSTIAGEE F LSSNRVLR
Sbjct: 305  RLHSTIAGEENFFLSSNRVLR 325


>ref|XP_004139526.1| PREDICTED: ABC transporter I family member 20-like [Cucumis sativus]
            gi|449518083|ref|XP_004166073.1| PREDICTED: ABC
            transporter I family member 20-like [Cucumis sativus]
          Length = 326

 Score =  495 bits (1275), Expect = e-138
 Identities = 242/322 (75%), Positives = 271/322 (84%)
 Frame = +3

Query: 147  SKPTIEINNLKFTYPGIDGHPPPGSTPLIDNFSLSLQAGERCLLVGSNGAGKTTILKILG 326
            S PTI I+ L+FTYPGIDGHPP GS PLI+NFSL+L AG+RCLLVGSNGAGKTTILKILG
Sbjct: 4    SDPTIVIDRLRFTYPGIDGHPPSGSKPLIENFSLTLNAGDRCLLVGSNGAGKTTILKILG 63

Query: 327  GKHMVEPHMVRVLGRSAFHDTALISSGDLCYLGGEWRRDVAFAGFDVPIQMDIAAEKMIF 506
            GKHMVEPHMVRVLGRSAFHDTAL  SGDLCYLGGEWRRD+AFAGFDVPIQM ++AEK+IF
Sbjct: 64   GKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQMAVSAEKLIF 123

Query: 507  GVSGIDPQRRAELLKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPYKVLLLDEITXXXXX 686
            GV G+DP+RR EL+ +LDIDLSW+MHKVSDGQRRRVQICMGLLK YKVLLLDEIT     
Sbjct: 124  GVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVDLDV 183

Query: 687  XXXXXXXKFLIKECQERGATIIYATHIFDGLENWPSHLVYVARGKLQLAMPMDKVKEISN 866
                   KFL +EC+ERGATIIYATHIFDGLE+WPSH+VYV+ GKLQ++MPMDK+KEIS 
Sbjct: 184  LARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKEISK 243

Query: 867  LSLMRTVESWLXXXXXXXXXXXXXXXASGLPEFESKVDGSRVIGGPAGSATRVMNNGWAA 1046
            LSLMRTVESWL               A+GLPEFE +++ SRV G PA SA RV+NNGWAA
Sbjct: 244  LSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPAHSAVRVINNGWAA 303

Query: 1047 GRLHSTIAGEEVFLLSSNRVLR 1112
            GRL+ST+AGEE FL SSNRVLR
Sbjct: 304  GRLNSTVAGEENFLFSSNRVLR 325


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