BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011036
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20320.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   130   1e-28
gb|AFK42054.1| unknown [Lotus japonicus]                              126   2e-27
ref|XP_002272136.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   125   6e-27
ref|XP_004172618.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-...   124   2e-26

>emb|CBI20320.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  130 bits (328), Expect = 1e-28
 Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
 Frame = +2

Query: 314 NRSFDCNICLDYARDPVVTLCGHLYCWPCIFKWLHFESTSSPLEPPHQQCPVCKADVSET 493
           N SFDCNICLD A DPVVTLCGHLYCWPCI+KWLH +ST SP+    Q CPVCKA++S T
Sbjct: 140 NGSFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLHVQST-SPVTEQQQNCPVCKANISHT 198

Query: 494 KLVPLYGRGDFSSEPNSKD---SMEIPRRPP 577
            LVPLYGRG   SE  +K       IPRRPP
Sbjct: 199 SLVPLYGRGPSPSESETKKLHVGPAIPRRPP 229


>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score =  130 bits (328), Expect = 1e-28
 Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
 Frame = +2

Query: 314 NRSFDCNICLDYARDPVVTLCGHLYCWPCIFKWLHFESTSSPLEPPHQQCPVCKADVSET 493
           N SFDCNICLD A DPVVTLCGHLYCWPCI+KWLH +ST SP+    Q CPVCKA++S T
Sbjct: 40  NGSFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLHVQST-SPVTEQQQNCPVCKANISHT 98

Query: 494 KLVPLYGRGDFSSEPNSKD---SMEIPRRPP 577
            LVPLYGRG   SE  +K       IPRRPP
Sbjct: 99  SLVPLYGRGPSPSESETKKLHVGPAIPRRPP 129


>gb|AFK42054.1| unknown [Lotus japonicus]
          Length = 248

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/99 (60%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
 Frame = +2

Query: 311 DNRSFDCNICLDYARDPVVTLCGHLYCWPCIFKWLHFESTSSPLEPPHQQ-CPVCKADVS 487
           DN  FDCNICL+ A DPVVTLCGHLYCWPCI+KWL  +S+S+  EP  QQ CP+CKA++S
Sbjct: 31  DNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSA--EPDQQQTCPICKAEIS 88

Query: 488 ETKLVPLYGRGDFSSEPNSKD---SMEIPRRPPNQQLQS 595
            T LVPLYGRG  +SE  SK     + IP+RPP   L +
Sbjct: 89  HTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLNA 127


>ref|XP_002272136.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2 [Vitis
           vinifera] gi|225446339|ref|XP_002272107.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1-like isoform 1 [Vitis
           vinifera]
          Length = 260

 Score =  125 bits (314), Expect = 6e-27
 Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 11/105 (10%)
 Frame = +2

Query: 293 KKKSVLDNRS-------FDCNICLDYARDPVVTLCGHLYCWPCIFKWLHFESTSSP-LEP 448
           K  S  DN S       FDCNICLD+ +DPVVTLCGHL+CWPCI+KWLHF+S S+   + 
Sbjct: 26  KPVSAADNGSDKNSYGGFDCNICLDFVQDPVVTLCGHLFCWPCIYKWLHFQSISTENPDQ 85

Query: 449 PHQQCPVCKADVSETKLVPLYGRGDFSSEPNSK---DSMEIPRRP 574
            H QCPVCKA+VS+T L+PLYGRG  +   N+K     + IPRRP
Sbjct: 86  KHPQCPVCKAEVSDTTLIPLYGRGQATKPSNAKAPHPDIFIPRRP 130


>ref|XP_004172618.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Cucumis sativus]
          Length = 261

 Score =  124 bits (310), Expect = 2e-26
 Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 4/92 (4%)
 Frame = +2

Query: 314 NRSFDCNICLDYARDPVVTLCGHLYCWPCIFKWLHFESTSSPLEPPH-QQCPVCKADVSE 490
           N  FDCNICLD A DPVVTLCGHLYCWPCI+KWLH + +S+  EP + Q CPVCKA ++ 
Sbjct: 38  NGCFDCNICLDSAADPVVTLCGHLYCWPCIYKWLHVQISSN--EPENTQNCPVCKASITP 95

Query: 491 TKLVPLYGRGDFSSEPNSKDS---MEIPRRPP 577
           + LVPLYGRG  +S+  SK S   M +PRRPP
Sbjct: 96  SSLVPLYGRGTSNSDSESKKSHLGMAVPRRPP 127