BLASTX nr result

ID: Cimicifuga21_contig00011025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011025
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338787.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_002327761.1| predicted protein [Populus trichocarpa] gi|1...   183   1e-44
ref|XP_002310303.1| predicted protein [Populus trichocarpa] gi|1...   183   1e-44
ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   183   1e-44
ref|XP_004151970.1| PREDICTED: 60S ribosomal protein L8-like [Cu...   182   2e-44

>ref|XP_002338787.1| predicted protein [Populus trichocarpa] gi|222873461|gb|EEF10592.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 470 MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 291
           MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST
Sbjct: 1   MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 60

Query: 290 VRRDAPPGQKVGLIAARRTGRLRGQ 216
           VRRDAPPGQKVGLIAARRTGRLRGQ
Sbjct: 61  VRRDAPPGQKVGLIAARRTGRLRGQ 85


>ref|XP_002327761.1| predicted protein [Populus trichocarpa] gi|118484622|gb|ABK94183.1|
           unknown [Populus trichocarpa]
           gi|222836846|gb|EEE75239.1| predicted protein [Populus
           trichocarpa]
          Length = 260

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 470 MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 291
           MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST
Sbjct: 165 MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 224

Query: 290 VRRDAPPGQKVGLIAARRTGRLRGQ 216
           VRRDAPPGQKVGLIAARRTGRLRGQ
Sbjct: 225 VRRDAPPGQKVGLIAARRTGRLRGQ 249


>ref|XP_002310303.1| predicted protein [Populus trichocarpa] gi|118484023|gb|ABK93898.1|
           unknown [Populus trichocarpa]
           gi|118486019|gb|ABK94853.1| unknown [Populus
           trichocarpa] gi|222853206|gb|EEE90753.1| predicted
           protein [Populus trichocarpa]
          Length = 260

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 470 MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 291
           MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST
Sbjct: 165 MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 224

Query: 290 VRRDAPPGQKVGLIAARRTGRLRGQ 216
           VRRDAPPGQKVGLIAARRTGRLRGQ
Sbjct: 225 VRRDAPPGQKVGLIAARRTGRLRGQ 249


>ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
           gi|147864499|emb|CAN80494.1| hypothetical protein
           VITISV_021173 [Vitis vinifera]
          Length = 260

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 470 MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 291
           MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST
Sbjct: 165 MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 224

Query: 290 VRRDAPPGQKVGLIAARRTGRLRGQ 216
           VRRDAPPGQKVGLIAARRTGRLRGQ
Sbjct: 225 VRRDAPPGQKVGLIAARRTGRLRGQ 249


>ref|XP_004151970.1| PREDICTED: 60S ribosomal protein L8-like [Cucumis sativus]
           gi|449496928|ref|XP_004160265.1| PREDICTED: 60S
           ribosomal protein L8-like [Cucumis sativus]
          Length = 260

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = -1

Query: 470 MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 291
           MIGQVAGGGRTEKP+LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST
Sbjct: 165 MIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 224

Query: 290 VRRDAPPGQKVGLIAARRTGRLRGQ 216
           VRRDAPPGQKVGLIAARRTGRLRGQ
Sbjct: 225 VRRDAPPGQKVGLIAARRTGRLRGQ 249


Top