BLASTX nr result

ID: Cimicifuga21_contig00011002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011002
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273467.2| PREDICTED: thioredoxin-like 3-2, chloroplast...   153   1e-44
ref|NP_196046.2| thioredoxin-like 3-2 [Arabidopsis thaliana] gi|...   136   8e-40
ref|XP_002316383.1| predicted protein [Populus trichocarpa] gi|2...   137   8e-40
ref|XP_002311079.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-39
ref|XP_002873141.1| thioredoxin family protein [Arabidopsis lyra...   132   1e-38

>ref|XP_002273467.2| PREDICTED: thioredoxin-like 3-2, chloroplastic-like [Vitis
           vinifera] gi|296085989|emb|CBI31430.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  153 bits (386), Expect(2) = 1e-44
 Identities = 68/91 (74%), Positives = 81/91 (89%)
 Frame = -1

Query: 484 DLFDSPISIELKPIASQGQFDRIVDKSQQLQDAFVIIWMATWCRKCIYLKPKLEKLAADY 305
           DL DSP+S+ELKPI+S  QFDRI+ ++QQL+++  I+WMATWCRKCIYLKPKLEKLAA+Y
Sbjct: 71  DLDDSPVSVELKPISSDTQFDRILGEAQQLEESVAIVWMATWCRKCIYLKPKLEKLAAEY 130

Query: 304 YPRIPFYCIDVNAVPHKLVAHAGVTKMPTIQ 212
           YPR+ FYC+DVN VPHKLVA A VTKMPTIQ
Sbjct: 131 YPRLRFYCVDVNTVPHKLVARAAVTKMPTIQ 161



 Score = 53.1 bits (126), Expect(2) = 1e-44
 Identities = 25/33 (75%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
 Frame = -3

Query: 212 IWKGGKKRAEVIGGHKAHLVVNEVREMIE-ECS 117
           +WK  KK+AEVIGGHKA+ VVNEVREMIE EC+
Sbjct: 162 LWKDSKKQAEVIGGHKAYFVVNEVREMIENECA 194


>ref|NP_196046.2| thioredoxin-like 3-2 [Arabidopsis thaliana]
           gi|52000834|sp|Q8VZT6.1|TRL32_ARATH RecName:
           Full=Thioredoxin-like 3-2, chloroplastic; AltName:
           Full=Thioredoxin WCRKC-2; Flags: Precursor
           gi|17380752|gb|AAL36206.1| putative thioredoxin
           [Arabidopsis thaliana] gi|21436391|gb|AAM51365.1|
           putative thioredoxin [Arabidopsis thaliana]
           gi|332003337|gb|AED90720.1| thioredoxin-like 3-2
           [Arabidopsis thaliana]
          Length = 192

 Score =  136 bits (342), Expect(2) = 8e-40
 Identities = 59/97 (60%), Positives = 80/97 (82%)
 Frame = -1

Query: 502 EDDSSPDLFDSPISIELKPIASQGQFDRIVDKSQQLQDAFVIIWMATWCRKCIYLKPKLE 323
           +D    +L DSP+S+EL PI  +  FD++++ +Q+L ++ VI+WMA WCRKCIYLKPKLE
Sbjct: 62  QDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLE 121

Query: 322 KLAADYYPRIPFYCIDVNAVPHKLVAHAGVTKMPTIQ 212
           KLAA++YPR+ FY +DVNAVP++LV+ AGVTKMPTIQ
Sbjct: 122 KLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQ 158



 Score = 54.3 bits (129), Expect(2) = 8e-40
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -3

Query: 212 IWKGGKKRAEVIGGHKAHLVVNEVREMIEECS 117
           +W+ G+K+AEVIGGHKAH VVNEVREMIE  S
Sbjct: 159 LWRDGQKQAEVIGGHKAHFVVNEVREMIENDS 190


>ref|XP_002316383.1| predicted protein [Populus trichocarpa] gi|222865423|gb|EEF02554.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  137 bits (345), Expect(2) = 8e-40
 Identities = 60/97 (61%), Positives = 79/97 (81%)
 Frame = -1

Query: 502 EDDSSPDLFDSPISIELKPIASQGQFDRIVDKSQQLQDAFVIIWMATWCRKCIYLKPKLE 323
           ++ S  ++ DSP+S EL+PI S+ QFDR++ ++QQL ++ +I+W   WCRKCIYLKPKLE
Sbjct: 1   QEGSLQEVDDSPVSFELEPIYSESQFDRVIAEAQQLVESVIIVWCVVWCRKCIYLKPKLE 60

Query: 322 KLAADYYPRIPFYCIDVNAVPHKLVAHAGVTKMPTIQ 212
           KLAADY  R+ FYC++VN +PHKLVA AGVTKMPTIQ
Sbjct: 61  KLAADYNRRLRFYCVNVNNIPHKLVARAGVTKMPTIQ 97



 Score = 53.1 bits (126), Expect(2) = 8e-40
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -3

Query: 212 IWKGGKKRAEVIGGHKAHLVVNEVREMIE 126
           +WK  KK+AEVIGGHKA+LV+NEVREMIE
Sbjct: 98  LWKDSKKQAEVIGGHKAYLVINEVREMIE 126


>ref|XP_002311079.1| predicted protein [Populus trichocarpa] gi|222850899|gb|EEE88446.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  135 bits (340), Expect(2) = 3e-39
 Identities = 60/88 (68%), Positives = 73/88 (82%)
 Frame = -1

Query: 475 DSPISIELKPIASQGQFDRIVDKSQQLQDAFVIIWMATWCRKCIYLKPKLEKLAADYYPR 296
           DSP+S EL+PI S+ QFDR++ ++QQL+++ +I+W   WCRKCIYLKPKLEKLAADYY R
Sbjct: 10  DSPVSFELEPIYSESQFDRVIAEAQQLEESVIIVWCVVWCRKCIYLKPKLEKLAADYYRR 69

Query: 295 IPFYCIDVNAVPHKLVAHAGVTKMPTIQ 212
             FY +DVN VPHKLV  AGVTKMPTIQ
Sbjct: 70  SRFYRVDVNNVPHKLVTRAGVTKMPTIQ 97



 Score = 53.1 bits (126), Expect(2) = 3e-39
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -3

Query: 212 IWKGGKKRAEVIGGHKAHLVVNEVREMIE 126
           +WK  KK+AEVIGGHKA+LV+NEVREMIE
Sbjct: 98  LWKDSKKQAEVIGGHKAYLVINEVREMIE 126


>ref|XP_002873141.1| thioredoxin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318978|gb|EFH49400.1| thioredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 194

 Score =  132 bits (331), Expect(2) = 1e-38
 Identities = 60/115 (52%), Positives = 86/115 (74%), Gaps = 2/115 (1%)
 Frame = -1

Query: 550 TDRI--RGEIIKPSGEILEDDSSPDLFDSPISIELKPIASQGQFDRIVDKSQQLQDAFVI 377
           TD+I    E  +    + +D    +L DSP+S+EL PI  +  FD++++++Q+L ++ VI
Sbjct: 46  TDKICLAAERFREVDALKQDGGLQELDDSPVSVELGPICGESHFDQVMEEAQKLGESVVI 105

Query: 376 IWMATWCRKCIYLKPKLEKLAADYYPRIPFYCIDVNAVPHKLVAHAGVTKMPTIQ 212
           +WMA WCRKCIYLKPKLEKLAA++YPR+ FY +DVNAVP++LV+ AGVT  PT+Q
Sbjct: 106 VWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTVSPTLQ 160



 Score = 54.3 bits (129), Expect(2) = 1e-38
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -3

Query: 212 IWKGGKKRAEVIGGHKAHLVVNEVREMIEECS 117
           +W+ G+K+AEVIGGHKAH VVNEVREMIE  S
Sbjct: 161 LWRDGQKQAEVIGGHKAHFVVNEVREMIENDS 192


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