BLASTX nr result

ID: Cimicifuga21_contig00010633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010633
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158942.1| PREDICTED: WD repeat-containing protein 5-li...   528   e-147
ref|XP_004147003.1| PREDICTED: WD repeat-containing protein 5-li...   528   e-147
emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera]   516   e-144
ref|XP_002278415.1| PREDICTED: WD repeat-containing protein 5 [V...   515   e-143
ref|XP_003590636.1| WD repeat-containing protein [Medicago trunc...   501   e-139

>ref|XP_004158942.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
          Length = 335

 Score =  528 bits (1361), Expect = e-147
 Identities = 248/305 (81%), Positives = 279/305 (91%), Gaps = 2/305 (0%)
 Frame = +3

Query: 78  YKPYRFLKTLTAHAQAVSCVKFSNNGSLFASSSLDKTLIVYSTQTLTLQSRLIGHSAGVS 257
           YKPYR LKTLTAH +AVSCVKFSN+G+L AS+SLDKTLI++S+ +LTL+ RL+GHS G+S
Sbjct: 31  YKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEGIS 90

Query: 258 DLAWSSDDHYICSASDDRTLRIWDARS--GESVKTLRGHSGFVFCVNFNPQSNLIVSGSF 431
           DLAWSSD HYICSASDDRTLRIWDARS  GE VKTLRGHS FVFCVNFNPQSNLIVSGSF
Sbjct: 91  DLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSF 150

Query: 432 DETVRVWDAKTGRCIHVIAAHSMPVTSVHFIRDGSIIVSGSHDGSCKIWDADKGACLLTL 611
           DET+R+W+ KTG+C+HVI AHSMPVTSVHF RDGS+IVSGSHDGSCKIWDA  G CL TL
Sbjct: 151 DETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLKTL 210

Query: 612 IDEKGPAVSFAKFSPNGKFILVATLDDTLKLWNYSSGKFLKMYTGHINKVYCITSTFSVT 791
           ID+K PAVSFAKFSPNGKFILVATL+DTLKLWNYS+GKFLK+YTGH+N+V+C+ STFSVT
Sbjct: 211 IDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFSVT 270

Query: 792 SGKYIVSGSEDRCVYIWDLQGKNLIQKLEGHTDTVISVSCHPYQNKIASAGLDNDRTVRI 971
           +GKYIVSGSED+CVYIWDLQ K +IQKLEGHTD VISVSCHP +NKIASAGLD DR+VR+
Sbjct: 271 NGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVRV 330

Query: 972 WTQDP 986
           W QDP
Sbjct: 331 WVQDP 335


>ref|XP_004147003.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
          Length = 358

 Score =  528 bits (1361), Expect = e-147
 Identities = 248/305 (81%), Positives = 279/305 (91%), Gaps = 2/305 (0%)
 Frame = +3

Query: 78  YKPYRFLKTLTAHAQAVSCVKFSNNGSLFASSSLDKTLIVYSTQTLTLQSRLIGHSAGVS 257
           YKPYR LKTLTAH +AVSCVKFSN+G+L AS+SLDKTLI++S+ +LTL+ RL+GHS G+S
Sbjct: 54  YKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEGIS 113

Query: 258 DLAWSSDDHYICSASDDRTLRIWDARS--GESVKTLRGHSGFVFCVNFNPQSNLIVSGSF 431
           DLAWSSD HYICSASDDRTLRIWDARS  GE VKTLRGHS FVFCVNFNPQSNLIVSGSF
Sbjct: 114 DLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSF 173

Query: 432 DETVRVWDAKTGRCIHVIAAHSMPVTSVHFIRDGSIIVSGSHDGSCKIWDADKGACLLTL 611
           DET+R+W+ KTG+C+HVI AHSMPVTSVHF RDGS+IVSGSHDGSCKIWDA  G CL TL
Sbjct: 174 DETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLKTL 233

Query: 612 IDEKGPAVSFAKFSPNGKFILVATLDDTLKLWNYSSGKFLKMYTGHINKVYCITSTFSVT 791
           ID+K PAVSFAKFSPNGKFILVATL+DTLKLWNYS+GKFLK+YTGH+N+V+C+ STFSVT
Sbjct: 234 IDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFSVT 293

Query: 792 SGKYIVSGSEDRCVYIWDLQGKNLIQKLEGHTDTVISVSCHPYQNKIASAGLDNDRTVRI 971
           +GKYIVSGSED+CVYIWDLQ K +IQKLEGHTD VISVSCHP +NKIASAGLD DR+VR+
Sbjct: 294 NGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVRV 353

Query: 972 WTQDP 986
           W QDP
Sbjct: 354 WVQDP 358


>emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera]
          Length = 315

 Score =  516 bits (1328), Expect = e-144
 Identities = 244/302 (80%), Positives = 274/302 (90%)
 Frame = +3

Query: 78  YKPYRFLKTLTAHAQAVSCVKFSNNGSLFASSSLDKTLIVYSTQTLTLQSRLIGHSAGVS 257
           Y+PYR L+TL AH +AVSCVKFS++G+L AS+SLDKTLIV+S+QTLTL+SRL+GHS G+S
Sbjct: 13  YRPYRLLRTLAAHDRAVSCVKFSSDGTLLASASLDKTLIVWSSQTLTLKSRLVGHSGGIS 72

Query: 258 DLAWSSDDHYICSASDDRTLRIWDARSGESVKTLRGHSGFVFCVNFNPQSNLIVSGSFDE 437
           DLAWSSD HYICSASDD TLRIWDA+S E VKTLRGH+  VFCVNFNPQSNLIVSGSFDE
Sbjct: 73  DLAWSSDSHYICSASDDLTLRIWDAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSGSFDE 132

Query: 438 TVRVWDAKTGRCIHVIAAHSMPVTSVHFIRDGSIIVSGSHDGSCKIWDADKGACLLTLID 617
           TVR+WD KTGR +H IAAHSMPVTSV+F RDGS+IVSGSHDGSCKIW +D GA L TLI+
Sbjct: 133 TVRIWDVKTGRPLHTIAAHSMPVTSVYFNRDGSLIVSGSHDGSCKIWASDTGALLKTLIE 192

Query: 618 EKGPAVSFAKFSPNGKFILVATLDDTLKLWNYSSGKFLKMYTGHINKVYCITSTFSVTSG 797
           + GPA+SFAKFSPNGK+ILVATLDDTLKLWNYS+GK LK+YTGH+NKVYCI S FSVT G
Sbjct: 193 DNGPAISFAKFSPNGKYILVATLDDTLKLWNYSTGKSLKIYTGHVNKVYCIASAFSVTYG 252

Query: 798 KYIVSGSEDRCVYIWDLQGKNLIQKLEGHTDTVISVSCHPYQNKIASAGLDNDRTVRIWT 977
           KYIVSGSED+CVY+WDLQGKN +QKLEGHTDTVISVSCHP +NKIASAGLD DRTVRIW 
Sbjct: 253 KYIVSGSEDKCVYVWDLQGKNPLQKLEGHTDTVISVSCHPNENKIASAGLDXDRTVRIWV 312

Query: 978 QD 983
           QD
Sbjct: 313 QD 314


>ref|XP_002278415.1| PREDICTED: WD repeat-containing protein 5 [Vitis vinifera]
          Length = 315

 Score =  515 bits (1326), Expect = e-143
 Identities = 243/302 (80%), Positives = 274/302 (90%)
 Frame = +3

Query: 78  YKPYRFLKTLTAHAQAVSCVKFSNNGSLFASSSLDKTLIVYSTQTLTLQSRLIGHSAGVS 257
           Y+PYR L+TL AH +AVSCVKFS++G+L AS+SLDKTLIV+S+QTLTL+SRL+GHS G+S
Sbjct: 13  YRPYRLLRTLAAHDRAVSCVKFSSDGTLLASASLDKTLIVWSSQTLTLKSRLVGHSGGIS 72

Query: 258 DLAWSSDDHYICSASDDRTLRIWDARSGESVKTLRGHSGFVFCVNFNPQSNLIVSGSFDE 437
           DLAWSSD HYICSASDD TLRIWDA+S E VKTLRGH+  VFCVNFNPQSNLIVSGSFDE
Sbjct: 73  DLAWSSDSHYICSASDDLTLRIWDAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSGSFDE 132

Query: 438 TVRVWDAKTGRCIHVIAAHSMPVTSVHFIRDGSIIVSGSHDGSCKIWDADKGACLLTLID 617
           TVR+WD KTGR +H IAAHSMPVTSV+F RDGS+IVSGSHDGSCKIW +D GA L TLI+
Sbjct: 133 TVRIWDVKTGRPLHTIAAHSMPVTSVYFNRDGSLIVSGSHDGSCKIWASDTGALLKTLIE 192

Query: 618 EKGPAVSFAKFSPNGKFILVATLDDTLKLWNYSSGKFLKMYTGHINKVYCITSTFSVTSG 797
           + GPA+SFAKFSPNGK+ILVATLDDTLKLWNYS+GK LK+YTGH+NKVYCI S FSVT G
Sbjct: 193 DNGPAISFAKFSPNGKYILVATLDDTLKLWNYSTGKSLKIYTGHVNKVYCIASAFSVTYG 252

Query: 798 KYIVSGSEDRCVYIWDLQGKNLIQKLEGHTDTVISVSCHPYQNKIASAGLDNDRTVRIWT 977
           KYIVSGSED+CVY+WDLQGKN +QKLEGHTDTVISVSCHP +NKIASAGLD D+TVRIW 
Sbjct: 253 KYIVSGSEDKCVYVWDLQGKNPLQKLEGHTDTVISVSCHPNENKIASAGLDGDKTVRIWV 312

Query: 978 QD 983
           QD
Sbjct: 313 QD 314


>ref|XP_003590636.1| WD repeat-containing protein [Medicago truncatula]
           gi|355479684|gb|AES60887.1| WD repeat-containing protein
           [Medicago truncatula] gi|388501300|gb|AFK38716.1|
           unknown [Medicago truncatula]
          Length = 316

 Score =  501 bits (1290), Expect = e-139
 Identities = 235/302 (77%), Positives = 270/302 (89%)
 Frame = +3

Query: 78  YKPYRFLKTLTAHAQAVSCVKFSNNGSLFASSSLDKTLIVYSTQTLTLQSRLIGHSAGVS 257
           YKPYR  KTLT H +AVSCVKFSN+G+L AS+SLDKTLI+YS+ TL+L  RL GHS G++
Sbjct: 14  YKPYRHHKTLTTHTRAVSCVKFSNDGNLLASASLDKTLIIYSSTTLSLLHRLTGHSEGIN 73

Query: 258 DLAWSSDDHYICSASDDRTLRIWDARSGESVKTLRGHSGFVFCVNFNPQSNLIVSGSFDE 437
           D+AWSSD HYICSASDD+TLRIWDA +G+ VKTLRGH   VFCVNFNPQSN IVSGSFDE
Sbjct: 74  DIAWSSDSHYICSASDDKTLRIWDANTGDCVKTLRGHGHNVFCVNFNPQSNYIVSGSFDE 133

Query: 438 TVRVWDAKTGRCIHVIAAHSMPVTSVHFIRDGSIIVSGSHDGSCKIWDADKGACLLTLID 617
           TVRVW+ KTG+ +HVI AH+MPVTSV F RDGS+IVSGSHDGSCKIWD + GA L TLID
Sbjct: 134 TVRVWEVKTGKSVHVIKAHAMPVTSVDFNRDGSLIVSGSHDGSCKIWDTNSGALLKTLID 193

Query: 618 EKGPAVSFAKFSPNGKFILVATLDDTLKLWNYSSGKFLKMYTGHINKVYCITSTFSVTSG 797
           +K PAVSFAKFSPNGKFILVATL+DTLKLWNY++G+ LKMY+GH+N+VYC+TSTFSVT+G
Sbjct: 194 DKVPAVSFAKFSPNGKFILVATLNDTLKLWNYAAGRSLKMYSGHVNRVYCLTSTFSVTNG 253

Query: 798 KYIVSGSEDRCVYIWDLQGKNLIQKLEGHTDTVISVSCHPYQNKIASAGLDNDRTVRIWT 977
           +YIVSGSEDRC+Y+WDLQ KN+IQKLEGHTDTVISV+CHP +NKIASAGLD DRTVRIW 
Sbjct: 254 RYIVSGSEDRCLYLWDLQQKNMIQKLEGHTDTVISVTCHPKENKIASAGLDGDRTVRIWV 313

Query: 978 QD 983
           QD
Sbjct: 314 QD 315


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