BLASTX nr result

ID: Cimicifuga21_contig00010000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010000
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318362.1| multidrug resistance protein ABC transporter...   243   1e-62
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   241   4e-62
ref|XP_003592151.1| Multidrug resistance protein ABC transporter...   239   1e-61
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   239   2e-61
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              239   2e-61

>ref|XP_002318362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222859035|gb|EEE96582.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1240

 Score =  243 bits (620), Expect = 1e-62
 Identities = 115/134 (85%), Positives = 124/134 (92%)
 Frame = +3

Query: 3    IPSEAPVAIDKNRPASNWPTVGKVEIQDLKIRYRPDTPLVLRGISCTFEGGHKIGIVGRT 182
            IPSEAP  ++ NRP SNWP VGKV+I DL+IRYRPDTPLVL+GISCTFEGGHKIGIVGRT
Sbjct: 981  IPSEAPEVVEDNRPPSNWPAVGKVDICDLQIRYRPDTPLVLQGISCTFEGGHKIGIVGRT 1040

Query: 183  GSGKTTLISALFRLVEPAGGKIVIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 362
            GSGKTTLI ALFRLVEPAGGKI++DG+DIS IGLHDLRSRFGIIPQDPTLFNGTVRYNLD
Sbjct: 1041 GSGKTTLIGALFRLVEPAGGKIIVDGIDISKIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 1100

Query: 363  PLSQHNDLEIWEVL 404
            PLS+H D EIWEVL
Sbjct: 1101 PLSKHTDQEIWEVL 1114


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  241 bits (615), Expect = 4e-62
 Identities = 115/134 (85%), Positives = 123/134 (91%)
 Frame = +3

Query: 3    IPSEAPVAIDKNRPASNWPTVGKVEIQDLKIRYRPDTPLVLRGISCTFEGGHKIGIVGRT 182
            IPSEAP  I  NRP SNWP VGKV+I DL+IRYRP+ PLVLRGISCTF+GGHKIGIVGRT
Sbjct: 1212 IPSEAPEVIQDNRPPSNWPAVGKVDICDLQIRYRPNAPLVLRGISCTFQGGHKIGIVGRT 1271

Query: 183  GSGKTTLISALFRLVEPAGGKIVIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 362
            GSGKTTLI ALFRLVEPAGGKI++DG+DIS IGLHDLRSRFGIIPQDPTLFNGTVRYNLD
Sbjct: 1272 GSGKTTLIGALFRLVEPAGGKIIVDGIDISRIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 1331

Query: 363  PLSQHNDLEIWEVL 404
            PLSQH+D EIWEVL
Sbjct: 1332 PLSQHSDKEIWEVL 1345


>ref|XP_003592151.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355481199|gb|AES62402.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1516

 Score =  239 bits (611), Expect = 1e-61
 Identities = 112/134 (83%), Positives = 124/134 (92%)
 Frame = +3

Query: 3    IPSEAPVAIDKNRPASNWPTVGKVEIQDLKIRYRPDTPLVLRGISCTFEGGHKIGIVGRT 182
            +PSEAP  I+ NRP  NWP VG+VEI++L+IRYRPD PLVLRGI+CTFEGGHKIGIVGRT
Sbjct: 1247 VPSEAPERIEGNRPPVNWPVVGRVEIKELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRT 1306

Query: 183  GSGKTTLISALFRLVEPAGGKIVIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 362
            GSGKTTLI ALFRLVEPAGGKI++DG+DI +IGLHDLRSRFGIIPQDPTLFNGTVRYNLD
Sbjct: 1307 GSGKTTLIGALFRLVEPAGGKIIVDGIDIGSIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 1366

Query: 363  PLSQHNDLEIWEVL 404
            PLSQH+D EIWEVL
Sbjct: 1367 PLSQHSDQEIWEVL 1380


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  239 bits (610), Expect = 2e-61
 Identities = 113/134 (84%), Positives = 122/134 (91%)
 Frame = +3

Query: 3    IPSEAPVAIDKNRPASNWPTVGKVEIQDLKIRYRPDTPLVLRGISCTFEGGHKIGIVGRT 182
            IPSEAP  I+ +RP  NWP VG+V+I DL+IRYRPDTPLVLRGI+CTFEGGHKIGIVGRT
Sbjct: 1263 IPSEAPEVIEGSRPPPNWPAVGRVDIHDLQIRYRPDTPLVLRGINCTFEGGHKIGIVGRT 1322

Query: 183  GSGKTTLISALFRLVEPAGGKIVIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 362
            GSGKTTLI ALFRLVEPAGGKI++DG+DISTIGLHDLRS FGIIPQDPTLFNG VRYNLD
Sbjct: 1323 GSGKTTLIGALFRLVEPAGGKIIVDGIDISTIGLHDLRSHFGIIPQDPTLFNGAVRYNLD 1382

Query: 363  PLSQHNDLEIWEVL 404
            PLSQH D EIWEVL
Sbjct: 1383 PLSQHTDHEIWEVL 1396


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  239 bits (610), Expect = 2e-61
 Identities = 113/134 (84%), Positives = 122/134 (91%)
 Frame = +3

Query: 3    IPSEAPVAIDKNRPASNWPTVGKVEIQDLKIRYRPDTPLVLRGISCTFEGGHKIGIVGRT 182
            IPSEAP  I+ +RP  NWP VG+V+I DL+IRYRPDTPLVLRGI+CTFEGGHKIGIVGRT
Sbjct: 1126 IPSEAPEVIEGSRPPPNWPAVGRVDIHDLQIRYRPDTPLVLRGINCTFEGGHKIGIVGRT 1185

Query: 183  GSGKTTLISALFRLVEPAGGKIVIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 362
            GSGKTTLI ALFRLVEPAGGKI++DG+DISTIGLHDLRS FGIIPQDPTLFNG VRYNLD
Sbjct: 1186 GSGKTTLIGALFRLVEPAGGKIIVDGIDISTIGLHDLRSHFGIIPQDPTLFNGAVRYNLD 1245

Query: 363  PLSQHNDLEIWEVL 404
            PLSQH D EIWEVL
Sbjct: 1246 PLSQHTDHEIWEVL 1259


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