BLASTX nr result

ID: Cimicifuga21_contig00009998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009998
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65607.1| hypothetical protein VITISV_042269 [Vitis vinifera]   100   2e-19
ref|XP_002278328.2| PREDICTED: filament-like plant protein 7-lik...    99   3e-19
ref|XP_002307274.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002310128.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_003525799.1| PREDICTED: filament-like plant protein 7-lik...    79   3e-13

>emb|CAN65607.1| hypothetical protein VITISV_042269 [Vitis vinifera]
          Length = 1124

 Score =  100 bits (248), Expect = 2e-19
 Identities = 64/157 (40%), Positives = 91/157 (57%), Gaps = 17/157 (10%)
 Frame = -1

Query: 422  ILWQSRSTQKNPDEILEETRIALTHVCPPVPRKVTDARENP------------GSSSSTD 279
            IL Q   +Q+NPDEI+E+ R+A+ H+         DAR++             G  SS  
Sbjct: 537  ILEQIHVSQRNPDEIIEDIRVAMAHINHLNTGDFFDARKSADHPDGSILPPPSGYISSKT 596

Query: 278  PQ----MVSSSQVSGTNGSPKGTSIPRVQSDVSKSICRVIELIEGIDQPSSMDYNS-SIL 114
            P     M SS +V+G + S   TS  ++QSD+SKSIC+++ELIEGI  P S+DY++    
Sbjct: 597  PNVSSVMXSSDRVTGVDNSSSETSNQKLQSDLSKSICKMVELIEGISLP-SLDYDTQETF 655

Query: 113  SEDNCGPIGYNNSASSTGYMVRVLQWKSSELRDVLQR 3
            S  +     + NS + TGY+VRV QWK+SELR VL +
Sbjct: 656  SRKDGSFFPHKNSETPTGYVVRVFQWKTSELRSVLNQ 692


>ref|XP_002278328.2| PREDICTED: filament-like plant protein 7-like [Vitis vinifera]
          Length = 1111

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 17/157 (10%)
 Frame = -1

Query: 422 ILWQSRSTQKNPDEILEETRIALTHVCPPVPRKVTDAR---ENPGSSSSTDPQ------- 273
           IL Q   +Q+NPDEI+E+ R+A+ H+         DAR   ++P  S  + P        
Sbjct: 524 ILEQIHVSQRNPDEIIEDIRVAMAHINHLNTGDFFDARKSADHPDGSILSPPSGYISPKT 583

Query: 272 ------MVSSSQVSGTNGSPKGTSIPRVQSDVSKSICRVIELIEGIDQPSSMDYNS-SIL 114
                 M SS +V+G + S   TS  ++QSD+SKSIC+++ELIEGI  P S+DY++    
Sbjct: 584 PNVSSVMGSSDRVTGVDNSSSETSNQKLQSDLSKSICKMVELIEGISLP-SLDYDTEETF 642

Query: 113 SEDNCGPIGYNNSASSTGYMVRVLQWKSSELRDVLQR 3
           S  +     + NS + TGY+VRV QWK+SELR VL +
Sbjct: 643 SRKDGSFFPHKNSETPTGYVVRVFQWKTSELRSVLNQ 679


>ref|XP_002307274.1| predicted protein [Populus trichocarpa] gi|222856723|gb|EEE94270.1|
           predicted protein [Populus trichocarpa]
          Length = 947

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 64/159 (40%), Positives = 85/159 (53%), Gaps = 20/159 (12%)
 Frame = -1

Query: 422 ILWQSRSTQKNPDEILEETRIALTHVCPPVPRKVTDARENPGSSSSTDPQMVSSSQVSG- 246
           +L Q+R TQ+ P EILE+ RIAL ++    P +  D R+     SST    ++S  V G 
Sbjct: 396 VLEQNRVTQRKPCEILEDVRIALANINHASPAEYVDTRQ-----SSTHSNGLNSPHVGGY 450

Query: 245 --------TNGSPKGT----------SIPRVQSDVSKSICRVIELIEGIDQPSSMDY-NS 123
                      SP G           S  +VQSD+ KS+C++IELIEGI   S  DY NS
Sbjct: 451 ISWKPMYSVTDSPGGVTEAEALSMDKSHQQVQSDLGKSLCKIIELIEGIAF-SYADYGNS 509

Query: 122 SILSEDNCGPIGYNNSASSTGYMVRVLQWKSSELRDVLQ 6
             L+  +     + N+ +  GYMVRVLQWK+SEL  VLQ
Sbjct: 510 ETLTRKDGDFFPFKNTETPPGYMVRVLQWKTSELCAVLQ 548


>ref|XP_002310128.1| predicted protein [Populus trichocarpa] gi|222853031|gb|EEE90578.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
 Frame = -1

Query: 422 ILWQSRSTQKNPDEILEETRIALTHVCPPVPRKVTDARENPGSSSSTDPQMVSSSQVSGT 243
           +L Q+R T + PDEILE+ RIAL ++    P +  D R+     SST    ++S  V   
Sbjct: 438 VLEQNRVTLRKPDEILEDVRIALANINHASPAEYDDTRQ-----SSTHSDGLNSFHV--- 489

Query: 242 NGSPKGTSIPRVQSDVSKSICRVIELIEGIDQPSSMDY-NSSILSEDNCGPIGYNNSASS 66
                         D+SKS+C++IELIEGI   S  DY NS  L+  +   + Y N+ + 
Sbjct: 490 --------------DLSKSLCKIIELIEGITL-SFADYGNSETLTRKDGSFLPYENTETP 534

Query: 65  TGYMVRVLQWKSSELRDVLQR 3
           +GYMVRVLQWK+SEL  VLQ+
Sbjct: 535 SGYMVRVLQWKTSELIAVLQQ 555


>ref|XP_003525799.1| PREDICTED: filament-like plant protein 7-like [Glycine max]
          Length = 1097

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 55/152 (36%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
 Frame = -1

Query: 422 ILWQSRSTQKNPDEILEETRIALTHVCPPVPRKVTDARENPGSSSSTDPQMV-------S 264
           +L Q+  T K+ D+IL++ R+AL +V  P       ++++    +   PQ +       +
Sbjct: 540 VLEQTHVTHKSSDDILDDIRVALRYVNNPDLFDFDSSKDSGHIDTQDPPQCIHCISCSNN 599

Query: 263 SSQVSGTNGSPKGTSIPRV----QSDVSKSICRVIELIEGIDQPSSMDYNSSI-LSEDNC 99
           S   SG   +    SI R+    Q D+SKSI ++IE++E I  PS +DY+SS  L E + 
Sbjct: 600 SLVASGDENNTGILSIKRITLQSQEDLSKSIGKIIEIVERICLPS-VDYDSSDPLHEGDG 658

Query: 98  GPIGYNNSASSTGYMVRVLQWKSSELRDVLQR 3
             + Y N    TGYMVRV QWK+SEL +VL++
Sbjct: 659 DIVSYKNVGMPTGYMVRVFQWKTSELSNVLRQ 690


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