BLASTX nr result

ID: Cimicifuga21_contig00009970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009970
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516262.1| copper transporter, putative [Ricinus commun...   127   3e-27
ref|NP_197565.1| copper transporter 5 [Arabidopsis thaliana] gi|...   124   2e-26
ref|XP_002874009.1| hypothetical protein ARALYDRAFT_910107 [Arab...   124   3e-26
ref|XP_002278146.1| PREDICTED: copper transporter 5 [Vitis vinif...   123   3e-26
ref|XP_002326289.1| copper transporter [Populus trichocarpa] gi|...   122   6e-26

>ref|XP_002516262.1| copper transporter, putative [Ricinus communis]
           gi|223544748|gb|EEF46264.1| copper transporter, putative
           [Ricinus communis]
          Length = 144

 Score =  127 bits (318), Expect = 3e-27
 Identities = 65/104 (62%), Positives = 75/104 (72%), Gaps = 5/104 (4%)
 Frame = +1

Query: 127 MMHMTFYWGKTVTVLFDSWKTDSWLSYFITLFVCFLFSIFYQYMEDRRLRIKIL---SKT 297
           MMHMT YWG  VT+LFDSWKTDSW SY ++L  CFLFS FYQYMEDRR++ K L   S  
Sbjct: 1   MMHMTLYWGIKVTLLFDSWKTDSWPSYLLSLLACFLFSSFYQYMEDRRIKFKSLAAASAA 60

Query: 298 KSSDPSIETPLL--SRLGVNRPAKYMAAVLFGINSAIGYMLMLA 423
            S   S+  PLL  S+LG    AK+ AA+LFG NSAIGY+LMLA
Sbjct: 61  TSQPSSVTVPLLRSSKLGRFSSAKFAAAILFGFNSAIGYLLMLA 104


>ref|NP_197565.1| copper transporter 5 [Arabidopsis thaliana]
           gi|75163170|sp|Q93VM8.1|COPT5_ARATH RecName: Full=Copper
           transporter 5; Short=AtCOPT5 gi|14517486|gb|AAK62633.1|
           AT5g20650/T1M15_50 [Arabidopsis thaliana]
           gi|15809714|gb|AAL06785.1| AT5g20650/T1M15_50
           [Arabidopsis thaliana] gi|21592530|gb|AAM64479.1| COPT5
           [Arabidopsis thaliana] gi|332005488|gb|AED92871.1|
           copper transporter 5 [Arabidopsis thaliana]
          Length = 146

 Score =  124 bits (311), Expect = 2e-26
 Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 6/105 (5%)
 Frame = +1

Query: 127 MMHMTFYWGKTVTVLFDSWKTDSWLSYFITLFVCFLFSIFYQYMEDRRLRIKILSKTKSS 306
           MMHMTFYWG   T+LFD WKTDSWLSY +TL  CF+FS FYQY+E+RR++ K LS ++ +
Sbjct: 1   MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60

Query: 307 DP------SIETPLLSRLGVNRPAKYMAAVLFGINSAIGYMLMLA 423
            P       +  PL+ + G    AK  + +LFG+N+AIGY+LMLA
Sbjct: 61  PPPPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLA 105


>ref|XP_002874009.1| hypothetical protein ARALYDRAFT_910107 [Arabidopsis lyrata subsp.
           lyrata] gi|297319846|gb|EFH50268.1| hypothetical protein
           ARALYDRAFT_910107 [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score =  124 bits (310), Expect = 3e-26
 Identities = 56/104 (53%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
 Frame = +1

Query: 127 MMHMTFYWGKTVTVLFDSWKTDSWLSYFITLFVCFLFSIFYQYMEDRRLRIKILSKTKSS 306
           MMHMTFYWG   T+LFD WKTDSWLSY +TL  CF+FS FYQY+E+RR++ K LS ++  
Sbjct: 1   MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRP 60

Query: 307 DP-----SIETPLLSRLGVNRPAKYMAAVLFGINSAIGYMLMLA 423
            P      +  PL+ + G    AK  + +LFG+N+AIGY+LMLA
Sbjct: 61  PPPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLA 104


>ref|XP_002278146.1| PREDICTED: copper transporter 5 [Vitis vinifera]
           gi|297738552|emb|CBI27797.3| unnamed protein product
           [Vitis vinifera] gi|321496070|gb|ADW93912.1| copper
           transporter [Vitis vinifera]
          Length = 148

 Score =  123 bits (309), Expect = 3e-26
 Identities = 64/107 (59%), Positives = 76/107 (71%), Gaps = 8/107 (7%)
 Frame = +1

Query: 127 MMHMTFYWGKTVTVLFDSWKTDSWLSYFITLFVCFLFSIFYQYMEDRRLRIKILSKTKSS 306
           MMHMT YWG  VT+LF SWKTDSW SY ++L  CFLFS+FYQ MEDRRLR K L+ T ++
Sbjct: 1   MMHMTLYWGTQVTLLFSSWKTDSWPSYALSLLACFLFSVFYQNMEDRRLRFKTLASTPAA 60

Query: 307 DP---SIETPLLSRLGVNR-----PAKYMAAVLFGINSAIGYMLMLA 423
            P   S  T LL +LG  R     P++   AVLFG+NSAIGY+LMLA
Sbjct: 61  APPSQSAATFLLFKLGRGRTRWGNPSRIAEAVLFGVNSAIGYLLMLA 107


>ref|XP_002326289.1| copper transporter [Populus trichocarpa]
           gi|222833482|gb|EEE71959.1| copper transporter [Populus
           trichocarpa]
          Length = 141

 Score =  122 bits (307), Expect = 6e-26
 Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
 Frame = +1

Query: 127 MMHMTFYWGKTVTVLFDSWKTDSWLSYFITLFVCFLFSIFYQYMEDRRLRIKILSKTKSS 306
           MMHMT YWG  VT+LFD WKTDSW SY ++L  CFLFS FYQY+EDRR+R K ++ +  S
Sbjct: 1   MMHMTLYWGIKVTLLFDCWKTDSWFSYLLSLLACFLFSAFYQYLEDRRIRFKAIAVSNPS 60

Query: 307 D--PSIETPLLSRLGVNRPAKYMAAVLFGINSAIGYMLMLA 423
              P +  PLL+       AK+  A+LFGIN+AIGY+LMLA
Sbjct: 61  QQPPPVNAPLLTPKRRASSAKFATALLFGINAAIGYLLMLA 101


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