BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009969
         (2153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   704   0.0  
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   701   0.0  
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   699   0.0  
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   643   0.0  
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   643   0.0  

>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus]
          Length = 517

 Score =  704 bits (1818), Expect = 0.0
 Identities = 367/508 (72%), Positives = 423/508 (83%), Gaps = 2/508 (0%)
 Frame = -1

Query: 2078 EKQRSVLLPVLPWMRNPVDVNLIEECPLKLLPCLDTRLEEALWRMGFSSLFPVQVAVWQE 1899
            +KQ+   +PVLPWMR+PVDV+LIEECPL++LP LD RL+ AL  MG SSLFPVQ+AVWQE
Sbjct: 3    DKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQE 62

Query: 1898 TIGPGAFERDLCINSPTGSGKTLAYALPIVHMLSTRVVKCLRALVVLPTRDLALQVKEVF 1719
             IGPG+F+RDLCINSPTGSGKTLAYALPIV MLS+R VKCLRALVVLPTRDLALQVKEVF
Sbjct: 63   AIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122

Query: 1718 DAIAPAVGLSVGLAVGQTSIADEISELIKKPKLEAGFGYDPEVHEVELQSSVDILVATPG 1539
             AIAPAVGLSVGLAVGQ+SIADEISELIK+PKLEAG  YDP+   VELQSSVDILVATPG
Sbjct: 123  SAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVATPG 182

Query: 1538 RLMDHINTTKGFTLEHIRYLVVDETDRLLREAYQSWLPTVLQLTHTEEGDIFPHATMFGN 1359
            RLMDHIN TKGFTL+H+RYLV+DETDRLLREAYQSWLPTVLQLTH ++  I   + +   
Sbjct: 183  RLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYISNP 242

Query: 1358 SMIGSLKTTRKSGVERGFKGKTSPRLVKMVLSATLTRDPSKLSQLDLHHPLFLTTGSQRY 1179
               GSLKT R+ GVERGFKGK  PRL KMVLSATLT+DP KL+QLDLHHPLFLTTG +RY
Sbjct: 243  CSDGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRY 302

Query: 1178 QLPEKLKSYKLICESKLKLFYLVALLEDLKGEKCIVFTSSVESTQRLSTLLKTFDGLQFK 999
            +LPEKL+SY +ICESKLK  YLVALL+ L  EKCIVFTSSVEST RL +LL  F+ L+ K
Sbjct: 303  KLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLELK 362

Query: 998  IKKYSGLQRQSVRSKTLRAFREGEIQILVASDAMTRGMDVEGVRTVINYDVPAYIKTYVH 819
            IK+YSGLQRQS+RSKTL AFR GEIQ+LV+SDAMTRGMDVEGV+ VINYD+PA+IKTY+H
Sbjct: 363  IKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTYIH 422

Query: 818  XXXXXXXXXXXGCCFTLLRRHEVKRFKKLLQKANHNTCTVYPLPADSVESLRAKYTS--E 645
                       G CFTLLR+ EVKRFKKLLQKA++++C V+ LP+ S+E L+  Y S  E
Sbjct: 423  RAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHNLPSSSIEFLQPTYVSALE 482

Query: 644  KLNKYMESETSKRRKASWNSSKAVKWKN 561
            KL + +ESETS R+    +SS+A K K+
Sbjct: 483  KLKEKVESETS-RKSTITSSSRAGKQKD 509


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
            gi|297740757|emb|CBI30939.3| unnamed protein product
            [Vitis vinifera]
          Length = 516

 Score =  701 bits (1810), Expect = 0.0
 Identities = 366/510 (71%), Positives = 418/510 (81%), Gaps = 2/510 (0%)
 Frame = -1

Query: 2087 MDDEKQRSVLLPVLPWMRNPVDVNLIEECPLKLLPCLDTRLEEALWRMGFSSLFPVQVAV 1908
            M + KQ+  + PVLPWMR+P+DV+L EECPL L PCLD RLE AL  MGFSSLFPVQVAV
Sbjct: 1    MKEAKQKKNV-PVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAV 59

Query: 1907 WQETIGPGAFERDLCINSPTGSGKTLAYALPIVHMLSTRVVKCLRALVVLPTRDLALQVK 1728
            WQET+GPGAFERDLCINSPTGSGKTLAYALPIV++LS+R VKCLRALVVLPTRDLALQVK
Sbjct: 60   WQETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVK 119

Query: 1727 EVFDAIAPAVGLSVGLAVGQTSIADEISELIKKPKLEAGFGYDPEVHEVELQSSVDILVA 1548
            EVF AIAPAVGLSVGLAVGQTSIADEISELIK+PKLEAG  YDPE   +ELQSSVDILVA
Sbjct: 120  EVFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVA 179

Query: 1547 TPGRLMDHINTTKGFTLEHIRYLVVDETDRLLREAYQSWLPTVLQLTHTEEGDIFPHATM 1368
            TPGRLMDHINTTKGFTL+H+RYLVVDETDRLLREAYQSWLPTVLQLT + +  +FP    
Sbjct: 180  TPGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKT 239

Query: 1367 FGNSMIGSLKTTRKSGVERGFKGKTSPRLVKMVLSATLTRDPSKLSQLDLHHPLFLTTGS 1188
               S  GS+ T R+ GVERGFKG++ PRLVK+VLSATLT+DPSKL+ LDLHHPL LT G 
Sbjct: 240  ILPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQ 299

Query: 1187 QRYQLPEKLKSYKLICESKLKLFYLVALLEDLKGEKCIVFTSSVESTQRLSTLLKTFDGL 1008
            +RYQLPEKLKS+KLICESKLK  YLVALL DL GEKCIVFTSSVES  RL TLL  F  L
Sbjct: 300  RRYQLPEKLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDL 359

Query: 1007 QFKIKKYSGLQRQSVRSKTLRAFREGEIQILVASDAMTRGMDVEGVRTVINYDVPAYIKT 828
            Q KI +YSGLQ Q VRSKTL  FR G+IQ+L++SD MTRGMDVEGVR VINYDVP +IKT
Sbjct: 360  QIKIGEYSGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRNVINYDVPKFIKT 419

Query: 827  YVHXXXXXXXXXXXGCCFTLLRRHEVKRFKKLLQKANHNTCTVYPLPADSVESLRAKYTS 648
            Y+H           G CFTLLR+ E KRFK+LLQKA+ ++C V+ + ++S+E+L + Y S
Sbjct: 420  YIHRAGRTARAGQTGRCFTLLRKDEDKRFKQLLQKADSDSCPVHSVASNSIEALHSVYVS 479

Query: 647  --EKLNKYMESETSKRRKASWNSSKAVKWK 564
              EKL + + SET+++RK ++ SS A K K
Sbjct: 480  ALEKLKETVVSETTRKRKINFKSSGADKRK 509


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  699 bits (1804), Expect = 0.0
 Identities = 363/506 (71%), Positives = 415/506 (82%), Gaps = 2/506 (0%)
 Frame = -1

Query: 2057 LPVLPWMRNPVDVNLIEECPLKLLPCLDTRLEEALWRMGFSSLFPVQVAVWQETIGPGAF 1878
            +PVLPWMR+PVDV+  EE PL +LPCLD RL+ AL  MGF +LFPVQ+AVWQETIGPGAF
Sbjct: 13   VPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIAVWQETIGPGAF 72

Query: 1877 ERDLCINSPTGSGKTLAYALPIVHMLSTRVVKCLRALVVLPTRDLALQVKEVFDAIAPAV 1698
            ERDLCINSPTGSGKTLAYALPIV +LSTR VKCLRALVVLPTRDLALQVK+VF AIAPA+
Sbjct: 73   ERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQVKQVFAAIAPAM 132

Query: 1697 GLSVGLAVGQTSIADEISELIKKPKLEAGFGYDPEVHEVELQSSVDILVATPGRLMDHIN 1518
            GLSVGLAVGQ+SIADEISELIKKP+ EAG  YDP+    ELQSSVDILVATPGRLMDHI 
Sbjct: 133  GLSVGLAVGQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDILVATPGRLMDHIT 192

Query: 1517 TTKGFTLEHIRYLVVDETDRLLREAYQSWLPTVLQLTHTEEGDIFPHATMFGNSMIGSLK 1338
            TTKGFTLEH+ YLVVDETDRLLRE+YQSWLPTVL+LT   +  + P    F     GSLK
Sbjct: 193  TTKGFTLEHLCYLVVDETDRLLRESYQSWLPTVLKLTRPYDESLVPGVNNFLPCASGSLK 252

Query: 1337 TTRKSGVERGFKGKTSPRLVKMVLSATLTRDPSKLSQLDLHHPLFLTTGSQRYQLPEKLK 1158
            T R+ GVERGFKGK+ PRL KMVLSATLT+DPSKL+QL+LHHPLFLTTG +RYQLPEKL+
Sbjct: 253  TIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPLFLTTGQRRYQLPEKLE 312

Query: 1157 SYKLICESKLKLFYLVALLEDLKGEKCIVFTSSVESTQRLSTLLKTFDGLQFKIKKYSGL 978
            SYKLIC SKLK  YLVA+L+ L GEKCIVFTSSVEST RL TLL  F  L+ KIK+YSGL
Sbjct: 313  SYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLLNFFGDLKVKIKEYSGL 372

Query: 977  QRQSVRSKTLRAFREGEIQILVASDAMTRGMDVEGVRTVINYDVPAYIKTYVHXXXXXXX 798
            QRQSVRSKTL+AFREGEIQ+LV+SDAMTRGMD+EGVR +INYD+PAY+KTYVH       
Sbjct: 373  QRQSVRSKTLKAFREGEIQVLVSSDAMTRGMDIEGVRNIINYDMPAYVKTYVHRAGRTAR 432

Query: 797  XXXXGCCFTLLRRHEVKRFKKLLQKANHNTCTVYPLPADSVESLRAKYTS--EKLNKYME 624
                G C TLLR HEVKRFKKLLQKA++++C +Y +P+ SV+SL   Y S  EKL + ++
Sbjct: 433  AGQTGRCITLLRTHEVKRFKKLLQKADNDSCPIYSIPSSSVKSLHPFYLSALEKLKETVQ 492

Query: 623  SETSKRRKASWNSSKAVKWKNSSIPE 546
            SETS++ K     S+  K +  S+ E
Sbjct: 493  SETSRKGKVGIKFSRVSKGEKKSLEE 518


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
            lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
            ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  643 bits (1659), Expect = 0.0
 Identities = 325/499 (65%), Positives = 395/499 (79%), Gaps = 2/499 (0%)
 Frame = -1

Query: 2081 DEKQRSVLLPVLPWMRNPVDVNLIEECPLKLLPCLDTRLEEALWRMGFSSLFPVQVAVWQ 1902
            D++ ++ +  V+PWMR PVDV+ +E C L+ LPCL+ +L++AL  MG SSLFPVQVAVW 
Sbjct: 4    DKEDKTEIDSVVPWMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAVWH 63

Query: 1901 ETIGPGAFERDLCINSPTGSGKTLAYALPIVHMLSTRVVKCLRALVVLPTRDLALQVKEV 1722
            ETIGPG FERD+C+NSPTGSGKTL+YALPIV +L++R V+CLRALVVLPTRDLALQVK+V
Sbjct: 64   ETIGPGGFERDICVNSPTGSGKTLSYALPIVQILASRPVRCLRALVVLPTRDLALQVKDV 123

Query: 1721 FDAIAPAVGLSVGLAVGQTSIADEISELIKKPKLEAGFGYDPEVHEVELQSSVDILVATP 1542
            FDAIAP VGLSVG AVGQ+SIA EIS+LIK PKL+AG  YDPE      +S+VDILVATP
Sbjct: 124  FDAIAPTVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPEDLSQNFESAVDILVATP 183

Query: 1541 GRLMDHINTTKGFTLEHIRYLVVDETDRLLREAYQSWLPTVLQLTHTEEGDIFPHATMFG 1362
            GRLMDHIN TKGFTLEH+RYLVVDETDRLLREAYQSWLPTVLQLT T +  +FP  T F 
Sbjct: 184  GRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDGLFPSCTPFV 243

Query: 1361 NSMIGSLKTTRKSGVERGFKGKTSPRLVKMVLSATLTRDPSKLSQLDLHHPLFLTTGSQR 1182
             S  GSL+T R+  VERGFKGK  PRLVKMVLSATLT+DPSKL QLDLHHPLF+TTG  R
Sbjct: 244  PSAFGSLRTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSR 303

Query: 1181 YQLPEKLKSYKLICESKLKLFYLVALLEDLKGEKCIVFTSSVESTQRLSTLLKTFDGLQF 1002
            Y+LPEKL+  +LICE+ +K  YLVALL+  +GEKCI+FTSSVE+T+RL  LL  F   + 
Sbjct: 304  YRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKI 363

Query: 1001 KIKKYSGLQRQSVRSKTLRAFREGEIQILVASDAMTRGMDVEGVRTVINYDVPAYIKTYV 822
            K K+YSG   QSVRSK L+AFR+G+IQ+LVASDA+TRGMDV+GV  VINYD+P + KT++
Sbjct: 364  KAKEYSGGLNQSVRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFI 423

Query: 821  HXXXXXXXXXXXGCCFTLLRRHEVKRFKKLLQKANHNTCTVYPLPADSVESLRAKYTS-- 648
            H           G CFTLL  HEV+RF KLL+K   ++C +YP+P  S++S+RA YT   
Sbjct: 424  HRAGRTARAGQAGRCFTLLSNHEVRRFSKLLKKVGSDSCPIYPIPPTSLDSIRATYTPAL 483

Query: 647  EKLNKYMESETSKRRKASW 591
            EKL + +ESE  K+ + ++
Sbjct: 484  EKLKELVESEAPKKGRQAF 502


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
            gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName: Full=DEAD-box
            ATP-dependent RNA helicase 1 gi|332658259|gb|AEE83659.1|
            RNA helicase 1 [Arabidopsis thaliana]
          Length = 522

 Score =  643 bits (1659), Expect = 0.0
 Identities = 325/499 (65%), Positives = 396/499 (79%), Gaps = 2/499 (0%)
 Frame = -1

Query: 2081 DEKQRSVLLPVLPWMRNPVDVNLIEECPLKLLPCLDTRLEEALWRMGFSSLFPVQVAVWQ 1902
            D++ ++ +  V+PWMR PVDV+ +E C L  LPCL+ +L++AL  MG SSLFPVQVAVW 
Sbjct: 4    DKEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWH 63

Query: 1901 ETIGPGAFERDLCINSPTGSGKTLAYALPIVHMLSTRVVKCLRALVVLPTRDLALQVKEV 1722
            ETIGPG FERD+C+NSPTGSGKTL+YALPIV +L++R V+CLRALVVLPTRDLALQVK+V
Sbjct: 64   ETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDV 123

Query: 1721 FDAIAPAVGLSVGLAVGQTSIADEISELIKKPKLEAGFGYDPEVHEVELQSSVDILVATP 1542
            FDAIAPAVGLSVG AVGQ+SIA EIS+LIK PKL+AG  YDP+     L+S+VDILVATP
Sbjct: 124  FDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATP 183

Query: 1541 GRLMDHINTTKGFTLEHIRYLVVDETDRLLREAYQSWLPTVLQLTHTEEGDIFPHATMFG 1362
            GRLMDHIN TKGFTLEH+RYLVVDETDRLLREAYQSWLPTVLQLT T +  +FP  T F 
Sbjct: 184  GRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFV 243

Query: 1361 NSMIGSLKTTRKSGVERGFKGKTSPRLVKMVLSATLTRDPSKLSQLDLHHPLFLTTGSQR 1182
             S  GSL+T R+  VERGFKGK  PRLVKMVLSATLT+DPSKL QLDLHHPLF+TTG  R
Sbjct: 244  PSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSR 303

Query: 1181 YQLPEKLKSYKLICESKLKLFYLVALLEDLKGEKCIVFTSSVESTQRLSTLLKTFDGLQF 1002
            Y+LPEKL+  +LICE+ +K  YLVALL+  +GEKCI+FTSSVE+T+RL  LL  F   + 
Sbjct: 304  YRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKI 363

Query: 1001 KIKKYSGLQRQSVRSKTLRAFREGEIQILVASDAMTRGMDVEGVRTVINYDVPAYIKTYV 822
            K K+YSG   QS+RSK L+AFR+G+IQ+LVASDA+TRGMDV+GV  VINYD+P + KT++
Sbjct: 364  KAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFI 423

Query: 821  HXXXXXXXXXXXGCCFTLLRRHEVKRFKKLLQKANHNTCTVYPLPADSVESLRAKYTS-- 648
            H           G CFTLL  HEV+RF KLL+K   ++C +YP+P  S++S+RA YT   
Sbjct: 424  HRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPAL 483

Query: 647  EKLNKYMESETSKRRKASW 591
            EKL + +ESE  K+ + ++
Sbjct: 484  EKLKELVESEAPKKGRQAF 502