BLASTX nr result

ID: Cimicifuga21_contig00009957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009957
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277288.1| PREDICTED: WD repeat-containing protein 74 [...   167   1e-39
ref|XP_002511220.1| WD-repeat protein, putative [Ricinus communi...   157   9e-37
ref|XP_003548450.1| PREDICTED: WD repeat-containing protein 74-l...   154   7e-36
ref|XP_002321685.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
gb|ADN33953.1| WD-repeat protein [Cucumis melo subsp. melo]           148   4e-34

>ref|XP_002277288.1| PREDICTED: WD repeat-containing protein 74 [Vitis vinifera]
           gi|297742065|emb|CBI33852.3| unnamed protein product
           [Vitis vinifera]
          Length = 421

 Score =  167 bits (422), Expect = 1e-39
 Identities = 88/155 (56%), Positives = 111/155 (71%), Gaps = 14/155 (9%)
 Frame = -2

Query: 424 ALRSIEVTNSPKESTSTDSLMTWNVCASGDVSFLLWMGMKAMPYL--EGLEVNLWDLGKR 251
           ++RS+E+T+S  +STS+ S  TWNVCASG++      G +       +G+EVN+WDL + 
Sbjct: 136 SMRSVELTSSHADSTSSVSSRTWNVCASGNILCSQVDGNENYALFGGKGVEVNVWDLEQG 195

Query: 250 SKIWAAKPPPTNSLGIFTPTWFTAATFLSKEDNREIVAGTNNHQVRLYDISALRRPLSSV 71
           +KIW AK PP NSLG+FTPTWFT+ATFLSK+D+R+ VAGTN+HQVRLYDISA RRP+ S 
Sbjct: 196 TKIWTAKSPPKNSLGLFTPTWFTSATFLSKDDHRKFVAGTNSHQVRLYDISAQRRPVISF 255

Query: 70  DFLETPIKAV------------TGSGDFASVDILT 2
           DF ETPIKAV             GSGD ASVD+ T
Sbjct: 256 DFRETPIKAVAEDQDGYTIYIGNGSGDLASVDMRT 290


>ref|XP_002511220.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550335|gb|EEF51822.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 406

 Score =  157 bits (397), Expect = 9e-37
 Identities = 84/155 (54%), Positives = 102/155 (65%), Gaps = 14/155 (9%)
 Frame = -2

Query: 424 ALRSIEVTNSPKESTSTDSLMTWNVCASGDVSFLLWMGMKAMPYLEG--LEVNLWDLGKR 251
           ++R +E   S  ++ S+D L  W VCASG++      G +      G  +E+NLWDL K 
Sbjct: 133 SIRPLEFNGSSADNASSDGLRNWKVCASGNIFCSKVDGSENYALFGGKSVELNLWDLEKC 192

Query: 250 SKIWAAKPPPTNSLGIFTPTWFTAATFLSKEDNREIVAGTNNHQVRLYDISALRRPLSSV 71
           S+IW AK PP NSLGIFTPTWFT+ATFLS +D+R+  AGT+NHQVRLYD SALRRP+ S 
Sbjct: 193 SRIWNAKSPPKNSLGIFTPTWFTSATFLSNDDHRKFAAGTSNHQVRLYDTSALRRPVISF 252

Query: 70  DFLETPIKAVT------------GSGDFASVDILT 2
           DF E PIKAVT            GSGD ASVDI T
Sbjct: 253 DFREAPIKAVTEDQDGYTIYIGNGSGDLASVDIRT 287


>ref|XP_003548450.1| PREDICTED: WD repeat-containing protein 74-like [Glycine max]
          Length = 550

 Score =  154 bits (389), Expect = 7e-36
 Identities = 80/155 (51%), Positives = 105/155 (67%), Gaps = 14/155 (9%)
 Frame = -2

Query: 424 ALRSIEVTNSPKESTSTDSLMTWNVCASGDVSFLLWMGMKAMPYL--EGLEVNLWDLGKR 251
           ++RSIE+ +S   S+  DS   WNVC+ G++      G +       +G+E+N+WDL   
Sbjct: 240 SIRSIELVDSSTVSSCIDSPKIWNVCSGGNILCCKVDGNEKFALFGGKGVEMNIWDLNNF 299

Query: 250 SKIWAAKPPPTNSLGIFTPTWFTAATFLSKEDNREIVAGTNNHQVRLYDISALRRPLSSV 71
           +KIW +KPPP ++LGIFTPTWFT+ATFL K+D+R+ VAGTN+HQVRLYD+SA RRP+ S 
Sbjct: 300 TKIWNSKPPPKDNLGIFTPTWFTSATFLMKDDHRKFVAGTNSHQVRLYDMSAQRRPVLSF 359

Query: 70  DFLETPIKAV------------TGSGDFASVDILT 2
           DF ETPIKA+             GSGD ASVDI T
Sbjct: 360 DFRETPIKALAEDIDGYSIYVGNGSGDMASVDIRT 394


>ref|XP_002321685.1| predicted protein [Populus trichocarpa] gi|222868681|gb|EEF05812.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  150 bits (379), Expect = 1e-34
 Identities = 83/155 (53%), Positives = 97/155 (62%), Gaps = 14/155 (9%)
 Frame = -2

Query: 424 ALRSIEVTNSPKESTSTDSLMTWNVCASGDVSFLLWMGMKAMPYL--EGLEVNLWDLGKR 251
           ++RSI V  S  +  +T    TW VC SG+V      G +       +G+EVNLWDL   
Sbjct: 132 SMRSIGVDKSMADVANTSVTKTWKVCGSGNVLCSKVDGSENYAVFGGKGVEVNLWDLESS 191

Query: 250 SKIWAAKPPPTNSLGIFTPTWFTAATFLSKEDNREIVAGTNNHQVRLYDISALRRPLSSV 71
           +KIW AKPPP NSLGIFTPTWFT  TFLS +D+R+  AGTN HQVRLYDISA RRP+ S 
Sbjct: 192 TKIWTAKPPPKNSLGIFTPTWFTCTTFLSNDDHRKFAAGTNIHQVRLYDISAQRRPVLSF 251

Query: 70  DFLETPIKAVT------------GSGDFASVDILT 2
           DF ET IKAVT            GSGD AS D+ T
Sbjct: 252 DFRETAIKAVTEDQDGHTIYIGNGSGDLASFDMRT 286


>gb|ADN33953.1| WD-repeat protein [Cucumis melo subsp. melo]
          Length = 422

 Score =  148 bits (374), Expect = 4e-34
 Identities = 78/153 (50%), Positives = 101/153 (66%), Gaps = 14/153 (9%)
 Frame = -2

Query: 424 ALRSIEVTNSPKESTSTDSLMTWNVCASGDVSFLLWMGMKAMPYL--EGLEVNLWDLGKR 251
           ++RSIE ++S     ST+ + TW VC SGDV      G +       +G+EVN+W+L + 
Sbjct: 136 SMRSIEFSSSSSRDASTNLVKTWKVCGSGDVMCSKVDGSETHALFGGKGVEVNMWNLEQC 195

Query: 250 SKIWAAKPPPTNSLGIFTPTWFTAATFLSKEDNREIVAGTNNHQVRLYDISALRRPLSSV 71
           +KIW AK P  N+LGIFTPTWFT+ATFLSK+D+R+  AGTN+HQVRLYDISA +RP+ S 
Sbjct: 196 TKIWTAKAPKKNNLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDISAQKRPVISF 255

Query: 70  DFLETPIKAV------------TGSGDFASVDI 8
           DF ETPIK++              SGD AS DI
Sbjct: 256 DFRETPIKSLAEDVDGNTIFVGNASGDLASFDI 288


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