BLASTX nr result

ID: Cimicifuga21_contig00009953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009953
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   262   2e-67
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]   260   5e-67
gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   253   9e-65
ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2...   248   3e-63
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu...   239   1e-60

>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
            gi|297745600|emb|CBI40765.3| unnamed protein product
            [Vitis vinifera]
          Length = 353

 Score =  262 bits (669), Expect = 2e-67
 Identities = 159/288 (55%), Positives = 174/288 (60%), Gaps = 6/288 (2%)
 Frame = -3

Query: 1224 NSAGTMVPHGLGMNNMGEQMXXXXXXXXXXXPDGTMALALTPVPH--QXXXXXXXXXXXX 1051
            ++ G ++PHGL MN   E +           PDGTMALAL+P P                
Sbjct: 66   STGGAIIPHGLNMNMGSEPLKRKRGRPRKYGPDGTMALALSPAPSGVNVSQSGGAFSSPP 125

Query: 1050 XXXXXXXXXXXXXXXXXXPGSGKKQQMAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQN 871
                              PGS KKQQM ALGSAG+GFTPHVITVKAGEDVSSKIMSFSQ+
Sbjct: 126  ASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTPHVITVKAGEDVSSKIMSFSQH 185

Query: 870  GPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRSRTGGLS 691
            GPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI             GQRSRTGGLS
Sbjct: 186  GPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRSRTGGLS 245

Query: 690  VSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFLAEGRKEPK-LNHSEPSSVAPKL---XX 523
            VS                   ASPVQVVVGSF+A+GRKE K  +  EPSS  PK+     
Sbjct: 246  VSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPKIAPVGG 305

Query: 522  XXXXXXXXXXXSRGTMSESSGGPGSPLNQSTGACNNSSAQGMASMPWK 379
                       SRGT+SESSGGPGSPLNQSTGACNNS+  GM S+PWK
Sbjct: 306  GGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPWK 353


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score =  260 bits (665), Expect = 5e-67
 Identities = 159/290 (54%), Positives = 174/290 (60%), Gaps = 6/290 (2%)
 Frame = -3

Query: 1224 NSAGTMVPHGLGMNNMGEQMXXXXXXXXXXXPDGTMALALTPVPH--QXXXXXXXXXXXX 1051
            ++ G ++PHGL MN   E +           PDGTMALAL+P P                
Sbjct: 66   STGGAIIPHGLNMNMGSEPLKRKRGRPRKYGPDGTMALALSPAPSGVNVSQSGGAFSSPP 125

Query: 1050 XXXXXXXXXXXXXXXXXXPGSGKKQQMAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQN 871
                              PGS KKQQM ALGSAG+GFTPHVITVKAGEDVSSKIMSFSQ+
Sbjct: 126  ASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTPHVITVKAGEDVSSKIMSFSQH 185

Query: 870  GPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRSRTGGLS 691
            GPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI             GQRSRTGGLS
Sbjct: 186  GPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRSRTGGLS 245

Query: 690  VSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFLAEGRKEPK-LNHSEPSSVAPKL---XX 523
            VS                   ASPVQVVVGSF+A+GRKE K  +  EPSS  PK+     
Sbjct: 246  VSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPKIAPVGG 305

Query: 522  XXXXXXXXXXXSRGTMSESSGGPGSPLNQSTGACNNSSAQGMASMPWK*T 373
                       SRGT+SESSGGPGSPLNQSTGACNNS+  GM S+PW  T
Sbjct: 306  GGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPWNLT 355


>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score =  253 bits (645), Expect = 9e-65
 Identities = 160/291 (54%), Positives = 178/291 (61%), Gaps = 10/291 (3%)
 Frame = -3

Query: 1221 SAGTMVPHGLGMNNMGEQMXXXXXXXXXXXPDGTMALALTPVPHQXXXXXXXXXXXXXXX 1042
            S   + PHGL +N +GE +           PDGTM+LALT V                  
Sbjct: 75   SPAAITPHGLNIN-VGEPVKRKRGRPRKYGPDGTMSLALTTVSPTAAVSPGSGGFSPSSA 133

Query: 1041 XXXXXXXXXXXXXXXP------GSGKKQQMAALGSAGIGFTPHVITVKAGEDVSSKIMSF 880
                                  GSGKKQQ+AALGSAGIGFTPHVITVKAGEDVSSKIMSF
Sbjct: 134  GAGNPASSASAEAMKKARGRPPGSGKKQQLAALGSAGIGFTPHVITVKAGEDVSSKIMSF 193

Query: 879  SQNGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRSRTG 700
            SQ+GPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEI             GQRSRTG
Sbjct: 194  SQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEILSLSGSFLLSESGGQRSRTG 253

Query: 699  GLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFLAEGRKEPKLNHSEPS--SVAP-KL 529
            GLSVS                   ASPVQVVVGSF+A+G+KEPK  H+ PS  ++AP KL
Sbjct: 254  GLSVSLAGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGKKEPK--HTAPSDPTLAPGKL 311

Query: 528  XXXXXXXXXXXXXSRGTMSESS-GGPGSPLNQSTGACNNSSAQGMASMPWK 379
                         SRGT+SESS GGPGSPLNQSTG CNNS+ QG+++MPWK
Sbjct: 312  AAGGAAAGANSPPSRGTLSESSGGGPGSPLNQSTGTCNNSNQQGLSNMPWK 362


>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  248 bits (632), Expect = 3e-63
 Identities = 135/206 (65%), Positives = 149/206 (72%), Gaps = 1/206 (0%)
 Frame = -3

Query: 993 GSGKKQQMAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQNGPRAVCILSANGAISNVTL 814
           GS KKQQ+ ALGSAG GFTPHVITVKAGED+SSK+MSFSQ+GPRAVCILSANGAISNVTL
Sbjct: 67  GSSKKQQLNALGSAGFGFTPHVITVKAGEDISSKVMSFSQHGPRAVCILSANGAISNVTL 126

Query: 813 RQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXX 634
           RQ ATSGGTVTYEGRFEI             GQRSR+GGLSV                  
Sbjct: 127 RQQATSGGTVTYEGRFEILALSGSYLPSENGGQRSRSGGLSVCLSGPDGRVLGGTVAGLL 186

Query: 633 XXASPVQVVVGSFLAEGRKEPK-LNHSEPSSVAPKLXXXXXXXXXXXXXSRGTMSESSGG 457
             A+PVQVVVGSF+A+GRKE K  NH+EPSS   +L             SRGT+SESSGG
Sbjct: 187 VAAAPVQVVVGSFIADGRKESKTANHTEPSSATSRLPPRGGSTGVSSPPSRGTLSESSGG 246

Query: 456 PGSPLNQSTGACNNSSAQGMASMPWK 379
           PGSPLNQSTGACNNS+ QGM+SMPW+
Sbjct: 247 PGSPLNQSTGACNNSNPQGMSSMPWE 272


>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
           gi|223551427|gb|EEF52913.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 374

 Score =  239 bits (610), Expect = 1e-60
 Identities = 134/206 (65%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
 Frame = -3

Query: 993 GSGKKQQMAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQNGPRAVCILSANGAISNVTL 814
           GS KKQQ+ ALGSAG GFTPH+ITVKAGEDVSSKIMSFSQ+GPRAVCILSANGAISNVTL
Sbjct: 169 GSNKKQQLEALGSAGFGFTPHIITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTL 228

Query: 813 RQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXX 634
           RQ ATSGG+VTYEGRFEI             GQRSRTGGLSVS                 
Sbjct: 229 RQPATSGGSVTYEGRFEILSLSGSFLPSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLL 288

Query: 633 XXASPVQVVVGSFLAEGRKEPKL-NHSEPSSVAPKLXXXXXXXXXXXXXSRGTMSESSGG 457
             ASPVQVVV SF+++ RKE K  NH EP S   +L             SRGT SESSGG
Sbjct: 289 LAASPVQVVVASFISDDRKELKSPNHLEPLSAMNRLTPVMGTTGPSSPPSRGTFSESSGG 348

Query: 456 PGSPLNQSTGACNNSSAQGMASMPWK 379
           PGSPLNQSTGACNNS+ QG++SMPWK
Sbjct: 349 PGSPLNQSTGACNNSNLQGISSMPWK 374


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