BLASTX nr result

ID: Cimicifuga21_contig00009937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009937
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-l...   177   4e-42
gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]             159   7e-37
gb|ABK23898.1| unknown [Picea sitchensis]                             151   2e-34
ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-l...   150   3e-34
ref|XP_002310906.1| high mobility group family [Populus trichoca...   149   1e-33

>ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
           gi|147815109|emb|CAN61363.1| hypothetical protein
           VITISV_034306 [Vitis vinifera]
           gi|297742725|emb|CBI35359.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  177 bits (448), Expect = 4e-42
 Identities = 95/185 (51%), Positives = 115/185 (62%), Gaps = 2/185 (1%)
 Frame = +1

Query: 193 PTARKKAESETISLKRANDGSAFTKCEECKKDVPVVLIDMHNCSLXXXXXXXXXXXXXXX 372
           P  RK+ E+ET SLKRA DGSAF +CEECKKDVPVVLIDMH+CSL               
Sbjct: 4   PKQRKRVEAETSSLKRARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQVVEK 63

Query: 373 XXXXXXXXXXXTGXXXXXXXXXXXXXXXX--DPNMPKKPPTAFFLFMADFRKTFKEEHPD 546
                                          DPNMPK+PPTAFFLFM DFRK +KE +PD
Sbjct: 64  VTDVKKKPAEKKNATTTEPKPKKSRRLRKVKDPNMPKRPPTAFFLFMDDFRKEYKESNPD 123

Query: 547 NKSVAVVGKEGGAKWNNLSEEEKKVYLDRNAELNEEYKKALEKYNSENANGEEQGAGSDK 726
           +K+V+VV KEGG KW ++++EEKK Y+D+ AEL  EY KA+E YN+E  NGEE+G GS K
Sbjct: 124 SKNVSVVAKEGGEKWKSMTDEEKKPYVDKAAELKAEYDKAMETYNAE--NGEEEG-GSGK 180

Query: 727 EQDAD 741
           E D +
Sbjct: 181 EADLE 185


>gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]
          Length = 208

 Score =  159 bits (403), Expect = 7e-37
 Identities = 95/210 (45%), Positives = 117/210 (55%), Gaps = 2/210 (0%)
 Frame = +1

Query: 175 SSKSNAPTARKKAESETISLKRANDGSAFTKCEECKKDVPVVLIDMHNCSLXXXXXXXXX 354
           S+K+N P  RK+ E +T  +KRA DGSAFT+CE C KDVPVVLIDMH+CSL         
Sbjct: 5   SAKANPPRPRKRVEVDT--MKRARDGSAFTRCEVCNKDVPVVLIDMHSCSLDSKIRMNLE 62

Query: 355 XXXXXXXXXXXXXXXXX--TGXXXXXXXXXXXXXXXXDPNMPKKPPTAFFLFMADFRKTF 528
                                                + N PK+ PTAFFLFM DFRK +
Sbjct: 63  AQVVEKETEVKNKPVERKRAAPSENKERKVKKGKKNVNTNKPKRAPTAFFLFMDDFRKEY 122

Query: 529 KEEHPDNKSVAVVGKEGGAKWNNLSEEEKKVYLDRNAELNEEYKKALEKYNSENANGEEQ 708
           KE HPDNKSVA V KEGG +W +++ EEKK Y DR AEL  EY K +E    E A+G E+
Sbjct: 123 KELHPDNKSVASVAKEGGERWRSMTIEEKKPYTDRAAELKAEYVKEIE----EKADGGEE 178

Query: 709 GAGSDKEQDADPEKEEDIEKEQGVESDIEE 798
              ++KEQ  + E EE+ EKE   E + EE
Sbjct: 179 VKENEKEQ--EEEVEEENEKEDATEENEEE 206


>gb|ABK23898.1| unknown [Picea sitchensis]
          Length = 220

 Score =  151 bits (382), Expect = 2e-34
 Identities = 83/206 (40%), Positives = 109/206 (52%), Gaps = 11/206 (5%)
 Frame = +1

Query: 166 SKASSKSNAPTARKKAESETISLKRANDGSAFTKCEECKKDVPVVLIDMHNCSLXXXXXX 345
           + ASSK+N P  RK+ + +  +LKRA DGS FTKC+ C K +PV L DMH+C L      
Sbjct: 3   TNASSKTNPPRQRKRVDVDPANLKRARDGSGFTKCDVCNKHIPVALSDMHDCQLEDKIRS 62

Query: 346 XXXXXXXXXXXXXXXXXXXXTGXXXXXXXXXXXXXXXX---DPNMPKKPPTAFFLFMADF 516
                                                    DPN PKKP TAFF+FM DF
Sbjct: 63  NFDASKETKHADAQKPPEAKKAKKKSADEKPKKRTREKKARDPNQPKKPATAFFVFMDDF 122

Query: 517 RKTFKEEHPDNKSVAVVGKEGGAKWNNLSEEEKKVYLDRNAELNEEYKKALEKYNSE--- 687
           RKT+KE +PD K  A VGKEGG KW  +S+E+KK YL++ AEL  EY+KA+ KY  +   
Sbjct: 123 RKTYKETNPDVKGAAQVGKEGGLKWKAMSDEDKKPYLEKAAELKAEYEKAMSKYQQDLKD 182

Query: 688 -----NANGEEQGAGSDKEQDADPEK 750
                +  GE++ A SD + D + E+
Sbjct: 183 EAAKSSDGGEDEVAKSDADGDVNDEE 208


>ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
          Length = 200

 Score =  150 bits (380), Expect = 3e-34
 Identities = 87/202 (43%), Positives = 113/202 (55%), Gaps = 2/202 (0%)
 Frame = +1

Query: 172 ASSKSNAPTARKKAESETISLKRANDGSAFTKCEECKKDVPVVLIDMHNCSLXXXXXXXX 351
           ASS+S        + + ++ L RA DGSAF +C++CKK+VPV LIDMH+CSL        
Sbjct: 2   ASSQSKKRVDAVDSRAASVLL-RAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNL 60

Query: 352 XXXXXXXXXXXXXXXXXX--TGXXXXXXXXXXXXXXXXDPNMPKKPPTAFFLFMADFRKT 525
                               +                 DPNMPK+PPTAFF F+ DFRK+
Sbjct: 61  DAQVVEQAAEAKKPERKKPKSKEPMAKKAKVEKVKKVKDPNMPKRPPTAFFAFLDDFRKS 120

Query: 526 FKEEHPDNKSVAVVGKEGGAKWNNLSEEEKKVYLDRNAELNEEYKKALEKYNSENANGEE 705
           FKE +PD+K V  VGKE G KW ++++EEKK YLD+ AEL  EY+KA+E Y  E    EE
Sbjct: 121 FKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVAELKAEYEKAMESY--EAGQDEE 178

Query: 706 QGAGSDKEQDADPEKEEDIEKE 771
             AGSDKE  A   +EE  ++E
Sbjct: 179 DQAGSDKEAAAKEVEEELTDEE 200


>ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
           gi|118483462|gb|ABK93630.1| unknown [Populus
           trichocarpa] gi|222853809|gb|EEE91356.1| high mobility
           group family [Populus trichocarpa]
          Length = 201

 Score =  149 bits (375), Expect = 1e-33
 Identities = 91/203 (44%), Positives = 111/203 (54%), Gaps = 15/203 (7%)
 Frame = +1

Query: 199 ARKKAESE----------TISLKRANDGSAFTKCEECKKDVPVVLIDMHNCSLXXXXXXX 348
           ARK+ E+E          T SL RA DGSAFTKCEECKKDVPV LI  H+CSL       
Sbjct: 2   ARKRVEAESTDGSVDANTTTSLVRAKDGSAFTKCEECKKDVPVALISFHSCSLDAKIKMN 61

Query: 349 XXXXXXXXXXXXXXXXXXXT--GXXXXXXXXXXXXXXXXDPNMPKKPPTAFFLFMADFRK 522
                                                  DPN PK+PPTAFFLFM DFRK
Sbjct: 62  LEAQVVEKPTEAKQKPAERKKGSSTEPKLKKAKKEKKGRDPNAPKRPPTAFFLFMDDFRK 121

Query: 523 TFKEEHPDNKSVAVVGKEGGAKWNNLSEEEKKVYLDRNAELNEEYKKALEKYNSENANGE 702
            +KE +PD+K V  V KEGG +W ++++EEKK Y+D+ AEL  E  KALE  N+EN   +
Sbjct: 122 EYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKAAELKAENDKALESDNAENE--D 179

Query: 703 EQGAGSDKEQDADPE---KEEDI 762
           ++G  S+KE  AD E   KEE+I
Sbjct: 180 DEGVSSEKEV-ADLELRDKEEEI 201


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