BLASTX nr result

ID: Cimicifuga21_contig00009933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009933
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275709.1| PREDICTED: transmembrane protein 115 [Vitis ...   428   e-117
ref|XP_002316359.1| hypothetical protein POPTRDRAFT_659857 [Popu...   406   e-111
ref|XP_002533249.1| Transmembrane protein, putative [Ricinus com...   405   e-110
ref|XP_004143801.1| PREDICTED: transmembrane protein 115-like [C...   402   e-110
ref|XP_002311100.1| predicted protein [Populus trichocarpa] gi|2...   392   e-106

>ref|XP_002275709.1| PREDICTED: transmembrane protein 115 [Vitis vinifera]
            gi|296086036|emb|CBI31477.3| unnamed protein product
            [Vitis vinifera]
          Length = 311

 Score =  428 bits (1101), Expect = e-117
 Identities = 209/311 (67%), Positives = 249/311 (80%)
 Frame = -3

Query: 1247 SSRLDSGGAGFFSGFTQLCKGLAVVLVGGSVIVQAFPPAVTYLTLIPARTIPFAWNLITA 1068
            SS   SGG G FSGFT+LCKGLAVV+VGG V+VQ FP AV YL LIPARTIPFAWNLIT+
Sbjct: 2    SSSALSGGTGNFSGFTRLCKGLAVVIVGGHVVVQFFPSAVAYLALIPARTIPFAWNLITS 61

Query: 1067 GYIEQSLVGMVVSTLGLLFIGRLLEPIWGSKEFLKFILVVNFLTSVCVFVTAIALYYVTR 888
            GYIEQ++ G VVST+GLLF+G+LLEPIWG++EFLKFI VVNFLTSVCVF+TAIALYY+TR
Sbjct: 62   GYIEQTIYGTVVSTVGLLFLGKLLEPIWGTREFLKFIFVVNFLTSVCVFITAIALYYITR 121

Query: 887  NESYLYTPISGFHGILLGFLVGIKQILPDQDLSTFPQLKIKRKWVPSIVVLLAIVISFFI 708
             E+YLY P+SGFHG+L GFLVGIKQI+PDQ+LS F  LKI+ +W+PS+++LL+I ISFF 
Sbjct: 122  QENYLYMPLSGFHGVLSGFLVGIKQIIPDQELSLFSLLKIRARWLPSLMLLLSIAISFFT 181

Query: 707  AETTSYLPTLIFGTYMSWIYLRYLQSQPETTLRGDPSDEFAFSTFFPSFCRPVIDPIASI 528
             E+ +YLP LIFGTYM WIYLRYLQ +PET L+GDPSDEFAFSTFFP F RPVIDPI S+
Sbjct: 182  TESAAYLPALIFGTYMGWIYLRYLQRKPETRLKGDPSDEFAFSTFFPEFLRPVIDPIGSV 241

Query: 527  FDRLLCGRSRVTDEEDGYTLGGAPLPGSDPVXXXXXXXXXXXXXXXXXXXEKLIAGVNTE 348
            F RL CGR  ++DE+ G+TLGGAPLPGSDP+                   E+L AG + +
Sbjct: 242  FGRLCCGRFEISDEDRGHTLGGAPLPGSDPIEASRRRERGARALEERLAVERLTAGESAK 301

Query: 347  DPSHRDPAENV 315
            + S RD  E+V
Sbjct: 302  E-SGRDAVEDV 311


>ref|XP_002316359.1| hypothetical protein POPTRDRAFT_659857 [Populus trichocarpa]
            gi|222865399|gb|EEF02530.1| hypothetical protein
            POPTRDRAFT_659857 [Populus trichocarpa]
          Length = 275

 Score =  406 bits (1043), Expect = e-111
 Identities = 193/265 (72%), Positives = 225/265 (84%)
 Frame = -3

Query: 1229 GGAGFFSGFTQLCKGLAVVLVGGSVIVQAFPPAVTYLTLIPARTIPFAWNLITAGYIEQS 1050
            GGA  F+GFT+LCKGLAVVLV G ++VQ FP AV YL LIPARTIPFAWNL+TAGYIEQS
Sbjct: 8    GGASLFTGFTKLCKGLAVVLVAGHIVVQIFPSAVNYLALIPARTIPFAWNLLTAGYIEQS 67

Query: 1049 LVGMVVSTLGLLFIGRLLEPIWGSKEFLKFILVVNFLTSVCVFVTAIALYYVTRNESYLY 870
            + G+V STL LL +G+LLEP+WGSKEFLKFI +VNFLTSVCVF+TAI+LYY+TR E+YLY
Sbjct: 68   IYGVVASTLCLLIMGKLLEPVWGSKEFLKFIFIVNFLTSVCVFITAISLYYITRQENYLY 127

Query: 869  TPISGFHGILLGFLVGIKQILPDQDLSTFPQLKIKRKWVPSIVVLLAIVISFFIAETTSY 690
             PISGF GIL GFLVG KQI+PDQ+LS    L++K KW PS+++L+AIVISFF AE+  Y
Sbjct: 128  MPISGFQGILAGFLVGTKQIIPDQELSL---LRLKAKWFPSLMLLIAIVISFFTAESAKY 184

Query: 689  LPTLIFGTYMSWIYLRYLQSQPETTLRGDPSDEFAFSTFFPSFCRPVIDPIASIFDRLLC 510
            LPT+IFGTYMSWIYLRY   +PET LRGDPSD+FAFS+FFP F RPVIDPIASIF R+LC
Sbjct: 185  LPTIIFGTYMSWIYLRYFHRKPETKLRGDPSDDFAFSSFFPEFLRPVIDPIASIFHRMLC 244

Query: 509  GRSRVTDEEDGYTLGGAPLPGSDPV 435
            GR   + E  G+TLGGAPLPGSDP+
Sbjct: 245  GRFETSTEAHGHTLGGAPLPGSDPI 269


>ref|XP_002533249.1| Transmembrane protein, putative [Ricinus communis]
            gi|223526929|gb|EEF29134.1| Transmembrane protein,
            putative [Ricinus communis]
          Length = 308

 Score =  405 bits (1040), Expect = e-110
 Identities = 198/305 (64%), Positives = 238/305 (78%)
 Frame = -3

Query: 1229 GGAGFFSGFTQLCKGLAVVLVGGSVIVQAFPPAVTYLTLIPARTIPFAWNLITAGYIEQS 1050
            GG   +SGFT+LCKGLAVVLV G +IVQ  P +++YL LIPA+TIPF WNLITAGYIEQS
Sbjct: 8    GGTALYSGFTRLCKGLAVVLVAGHLIVQILPSSLSYLALIPAKTIPFGWNLITAGYIEQS 67

Query: 1049 LVGMVVSTLGLLFIGRLLEPIWGSKEFLKFILVVNFLTSVCVFVTAIALYYVTRNESYLY 870
            + G+VVSTL LL +G+LLEP+WGSKEFLKFI +VNFLTSVCVF+TAIALYY+T  E+YLY
Sbjct: 68   IYGVVVSTLCLLIMGKLLEPVWGSKEFLKFIFIVNFLTSVCVFITAIALYYITTQENYLY 127

Query: 869  TPISGFHGILLGFLVGIKQILPDQDLSTFPQLKIKRKWVPSIVVLLAIVISFFIAETTSY 690
             PISGF G+L GFLVG+KQI+PDQ+LS    L+IK KW+PS+ +LL+I +SFF  E+ +Y
Sbjct: 128  MPISGFQGVLSGFLVGMKQIIPDQELSV---LRIKAKWLPSLALLLSIAVSFFTPESVTY 184

Query: 689  LPTLIFGTYMSWIYLRYLQSQPETTLRGDPSDEFAFSTFFPSFCRPVIDPIASIFDRLLC 510
            LPT+IFGTY+SWIYLRYLQ +PET LRGDP+D+FAFSTFFP F RPVIDPIASIF R+LC
Sbjct: 185  LPTIIFGTYLSWIYLRYLQRKPETKLRGDPNDDFAFSTFFPEFLRPVIDPIASIFHRMLC 244

Query: 509  GRSRVTDEEDGYTLGGAPLPGSDPVXXXXXXXXXXXXXXXXXXXEKLIAGVNTEDPSHRD 330
            GRS  + E  GYTLGGAPLPGSDP+                   E+L A   + D   +D
Sbjct: 245  GRSETSTEAQGYTLGGAPLPGSDPIEASRRRERGARALEERLAAERL-AAARSSDDLKKD 303

Query: 329  PAENV 315
             +ENV
Sbjct: 304  ASENV 308


>ref|XP_004143801.1| PREDICTED: transmembrane protein 115-like [Cucumis sativus]
            gi|449529888|ref|XP_004171930.1| PREDICTED: transmembrane
            protein 115-like [Cucumis sativus]
          Length = 308

 Score =  402 bits (1034), Expect = e-110
 Identities = 196/305 (64%), Positives = 238/305 (78%)
 Frame = -3

Query: 1229 GGAGFFSGFTQLCKGLAVVLVGGSVIVQAFPPAVTYLTLIPARTIPFAWNLITAGYIEQS 1050
            GG+G F+GFT+LCKG+AVVL+GG ++VQ FP  V YL LIPARTIPFAWNL+TAGYIEQS
Sbjct: 8    GGSGSFTGFTKLCKGIAVVLIGGHILVQLFPVVVNYLALIPARTIPFAWNLLTAGYIEQS 67

Query: 1049 LVGMVVSTLGLLFIGRLLEPIWGSKEFLKFILVVNFLTSVCVFVTAIALYYVTRNESYLY 870
            + G+VVST+GLLF+G+LLEPIWGS+EFLKFI VVNFLTS+CVF+TAIALYY+T+ ESYLY
Sbjct: 68   IYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYITQEESYLY 127

Query: 869  TPISGFHGILLGFLVGIKQILPDQDLSTFPQLKIKRKWVPSIVVLLAIVISFFIAETTSY 690
             P+SGF+GIL GFLVGIKQ++PDQ+L   P LK+K KW+PS+ VLL+I +SF+     +Y
Sbjct: 128  LPVSGFYGILAGFLVGIKQMIPDQEL---PVLKLKAKWLPSLAVLLSIAVSFWTTGAATY 184

Query: 689  LPTLIFGTYMSWIYLRYLQSQPETTLRGDPSDEFAFSTFFPSFCRPVIDPIASIFDRLLC 510
            LPT+IFGTY+SWIYLRY Q +PE  L+GDPSD+FAFSTFFP   RPVIDPIASIF R+LC
Sbjct: 185  LPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFHRMLC 244

Query: 509  GRSRVTDEEDGYTLGGAPLPGSDPVXXXXXXXXXXXXXXXXXXXEKLIAGVNTEDPSHRD 330
            GRS   D  + YT  GAPLPGSDPV                   E+L A  + ++ S +D
Sbjct: 245  GRSESPDNAEDYTAAGAPLPGSDPVEASRRRERGARALEERLAAERLAAARSAQE-SGKD 303

Query: 329  PAENV 315
              ENV
Sbjct: 304  ATENV 308


>ref|XP_002311100.1| predicted protein [Populus trichocarpa] gi|222850920|gb|EEE88467.1|
            predicted protein [Populus trichocarpa]
          Length = 275

 Score =  392 bits (1006), Expect = e-106
 Identities = 189/265 (71%), Positives = 220/265 (83%)
 Frame = -3

Query: 1229 GGAGFFSGFTQLCKGLAVVLVGGSVIVQAFPPAVTYLTLIPARTIPFAWNLITAGYIEQS 1050
            GGA  F+GFT+LCKGLAVVLV   ++VQ  PPAV YL LIPARTIPF WNLITAGYIEQS
Sbjct: 8    GGASLFTGFTKLCKGLAVVLVTCHILVQILPPAVNYLALIPARTIPFVWNLITAGYIEQS 67

Query: 1049 LVGMVVSTLGLLFIGRLLEPIWGSKEFLKFILVVNFLTSVCVFVTAIALYYVTRNESYLY 870
            + G+V STL LL +G+LLEP+WGSKEFLKFI +VNFL S+CVF+TAI+LYY+TR E+YLY
Sbjct: 68   IYGVVASTLCLLIMGKLLEPVWGSKEFLKFIFIVNFLISICVFITAISLYYITRQENYLY 127

Query: 869  TPISGFHGILLGFLVGIKQILPDQDLSTFPQLKIKRKWVPSIVVLLAIVISFFIAETTSY 690
             PISGF GIL GFLVGIKQI+PDQ+LS    L+IK KW PS+++L+AI ISFF AE+ +Y
Sbjct: 128  MPISGFQGILAGFLVGIKQIIPDQELSL---LRIKAKWFPSLMLLIAIAISFFTAESAAY 184

Query: 689  LPTLIFGTYMSWIYLRYLQSQPETTLRGDPSDEFAFSTFFPSFCRPVIDPIASIFDRLLC 510
            LPTLIFGTYMSWIYLRY Q +PET LRGDPSD+FAFS+FFP   RP+IDPIASIF R+LC
Sbjct: 185  LPTLIFGTYMSWIYLRYFQRKPETKLRGDPSDDFAFSSFFPESLRPIIDPIASIFHRMLC 244

Query: 509  GRSRVTDEEDGYTLGGAPLPGSDPV 435
            GR   + E  G TLG A LPGSDP+
Sbjct: 245  GRFETSTEAHGDTLGDASLPGSDPI 269


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