BLASTX nr result

ID: Cimicifuga21_contig00009908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009908
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76530.1| hypothetical protein VITISV_012682 [Vitis vinifera]   335   9e-90
ref|XP_002285350.1| PREDICTED: peroxisomal membrane protein PMP2...   334   2e-89
ref|XP_002868294.1| predicted protein [Arabidopsis lyrata subsp....   311   1e-82
ref|NP_001031637.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) fa...   310   2e-82
ref|XP_004147155.1| PREDICTED: peroxisomal membrane protein PMP2...   308   2e-81

>emb|CAN76530.1| hypothetical protein VITISV_012682 [Vitis vinifera]
          Length = 185

 Score =  335 bits (859), Expect = 9e-90
 Identities = 158/185 (85%), Positives = 167/185 (90%)
 Frame = +3

Query: 132 MSDIIKDAWRKYLLQLQLHPLRTKAITAGVLAGCSDATAQKLSGIKXXXXXXXXXIMLYG 311
           MSD+IK AWR YLLQLQLHPLRTKAITAGVL GCSD  AQK+SGIK         +MLYG
Sbjct: 1   MSDLIKAAWRNYLLQLQLHPLRTKAITAGVLVGCSDVIAQKISGIKRLQLRRLILMMLYG 60

Query: 312 FAYGGPFGHFLHKLMDYIFKGKKDNTTVAKKVLLEQLTSSPWNNMFFMMYYGLVVEGRQW 491
           FAY GPFGHFLHKLMD IF+GKKDNTTVAKKV+LEQLTSSPWNNMFFMMYYGLVVEGR W
Sbjct: 61  FAYSGPFGHFLHKLMDIIFRGKKDNTTVAKKVVLEQLTSSPWNNMFFMMYYGLVVEGRGW 120

Query: 492 SLVKNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPIQFRVVFHSFVASCWAIFLNLKARTI 671
            LVKNKVRKDYPSVQLTAWKFWPIVGWVNYQYMP+QFRVVFHSFVASCWAIFLNLKAR++
Sbjct: 121 GLVKNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVVFHSFVASCWAIFLNLKARSV 180

Query: 672 AVKKA 686
           A+KKA
Sbjct: 181 AIKKA 185


>ref|XP_002285350.1| PREDICTED: peroxisomal membrane protein PMP22 [Vitis vinifera]
           gi|296083689|emb|CBI23678.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  334 bits (856), Expect = 2e-89
 Identities = 157/185 (84%), Positives = 167/185 (90%)
 Frame = +3

Query: 132 MSDIIKDAWRKYLLQLQLHPLRTKAITAGVLAGCSDATAQKLSGIKXXXXXXXXXIMLYG 311
           MSD+IK AWR YLLQLQLHPLRTKAITAGVL GCSD  AQK+SGIK         +MLYG
Sbjct: 1   MSDLIKAAWRNYLLQLQLHPLRTKAITAGVLVGCSDVIAQKISGIKRLQLRRLILMMLYG 60

Query: 312 FAYGGPFGHFLHKLMDYIFKGKKDNTTVAKKVLLEQLTSSPWNNMFFMMYYGLVVEGRQW 491
           FAY GPFGHFLHKLMD IF+GKKDNTTVAKKV+LEQLTSSPWNNMFFMMYYGLVVEGR W
Sbjct: 61  FAYSGPFGHFLHKLMDIIFRGKKDNTTVAKKVVLEQLTSSPWNNMFFMMYYGLVVEGRGW 120

Query: 492 SLVKNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPIQFRVVFHSFVASCWAIFLNLKARTI 671
            LV+NKVRKDYPSVQLTAWKFWPIVGWVNYQYMP+QFRVVFHSFVASCWAIFLNLKAR++
Sbjct: 121 GLVRNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVVFHSFVASCWAIFLNLKARSV 180

Query: 672 AVKKA 686
           A+KKA
Sbjct: 181 AIKKA 185


>ref|XP_002868294.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314130|gb|EFH44553.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  311 bits (797), Expect = 1e-82
 Identities = 145/185 (78%), Positives = 159/185 (85%)
 Frame = +3

Query: 132 MSDIIKDAWRKYLLQLQLHPLRTKAITAGVLAGCSDATAQKLSGIKXXXXXXXXXIMLYG 311
           MSD+ KDAWRKYL+QLQ HPLRTKAITAGVL GCSDA AQK+SG+K         +MLYG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLTGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 312 FAYGGPFGHFLHKLMDYIFKGKKDNTTVAKKVLLEQLTSSPWNNMFFMMYYGLVVEGRQW 491
           FAYGGPFGHF HKLMD IFKGKK N+TVAKKVLLEQLTSSPWNN  FM YYGLVVEGR W
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 492 SLVKNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPIQFRVVFHSFVASCWAIFLNLKARTI 671
            LVK KV KDYP++QLTAWKFWPIVGWVNYQY+P+QFRV+F SFVASCW+IFLNLKAR+ 
Sbjct: 121 KLVKQKVGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARSP 180

Query: 672 AVKKA 686
           A+K A
Sbjct: 181 AIKNA 185


>ref|NP_001031637.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
           [Arabidopsis thaliana] gi|62321523|dbj|BAD95003.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|98961831|gb|ABF59245.1| unknown protein [Arabidopsis
           thaliana] gi|332658013|gb|AEE83413.1| Peroxisomal
           membrane 22 kDa (Mpv17/PMP22) family protein
           [Arabidopsis thaliana]
          Length = 185

 Score =  310 bits (795), Expect = 2e-82
 Identities = 144/185 (77%), Positives = 160/185 (86%)
 Frame = +3

Query: 132 MSDIIKDAWRKYLLQLQLHPLRTKAITAGVLAGCSDATAQKLSGIKXXXXXXXXXIMLYG 311
           MSD+ KDAWRKYL+QLQ HPLRTKAITAGVLAGCSDA AQK+SG+K         +MLYG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 312 FAYGGPFGHFLHKLMDYIFKGKKDNTTVAKKVLLEQLTSSPWNNMFFMMYYGLVVEGRQW 491
           FAYGGPFGHF HKLMD IFKGKK N+TVAKKVLLEQLTSSPWNN  FM YYGLVVEGR W
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 492 SLVKNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPIQFRVVFHSFVASCWAIFLNLKARTI 671
            LVK+K+ KDYP++QLTAWKFWPIVGWVNYQY+P+QFRV+F SFVASCW+IFLNLKAR+ 
Sbjct: 121 KLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARSP 180

Query: 672 AVKKA 686
            +K A
Sbjct: 181 VIKNA 185


>ref|XP_004147155.1| PREDICTED: peroxisomal membrane protein PMP22-like [Cucumis
           sativus]
          Length = 183

 Score =  308 bits (788), Expect = 2e-81
 Identities = 144/180 (80%), Positives = 159/180 (88%)
 Frame = +3

Query: 132 MSDIIKDAWRKYLLQLQLHPLRTKAITAGVLAGCSDATAQKLSGIKXXXXXXXXXIMLYG 311
           MS I+ +AW+ YLLQLQ +PLRTKAITAGVLAG SD+ AQK+SGIK         +MLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 312 FAYGGPFGHFLHKLMDYIFKGKKDNTTVAKKVLLEQLTSSPWNNMFFMMYYGLVVEGRQW 491
           FAY GPFGHFLHKLMD IFKGKK NTTVAKKVLLEQ+TSSPWNN+FFMMYYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 492 SLVKNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPIQFRVVFHSFVASCWAIFLNLKARTI 671
           SLVK KVRKDYP++QLTAW+FWPIVGWVNYQYMPIQFRV+FHSFVASCW IFLNLKAR++
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180


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