BLASTX nr result

ID: Cimicifuga21_contig00009898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009898
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510416.1| ornithine carbamoyltransferase, putative [Ri...   149   5e-34
ref|XP_002281919.1| PREDICTED: ornithine carbamoyltransferase, c...   147   1e-33
gb|ABK93198.1| unknown [Populus trichocarpa]                          144   1e-32
ref|XP_002307666.1| predicted protein [Populus trichocarpa] gi|2...   133   3e-29
gb|ADN34186.1| ornithine carbamoyltransferase [Cucumis melo subs...   130   2e-28

>ref|XP_002510416.1| ornithine carbamoyltransferase, putative [Ricinus communis]
           gi|223551117|gb|EEF52603.1| ornithine
           carbamoyltransferase, putative [Ricinus communis]
          Length = 378

 Score =  149 bits (375), Expect = 5e-34
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = +1

Query: 346 RISCQTSASAAPVSSLVNGKAKAGLKDFIHISDFDKDTIMKILNRAAEVKALLKSGDRTF 525
           RISCQTS++ +  SS VNGKAK  LKDF+HISDFDK TIMKIL+RAAEVKALLKSGDR+F
Sbjct: 51  RISCQTSSATSSPSSSVNGKAKTELKDFVHISDFDKATIMKILDRAAEVKALLKSGDRSF 110

Query: 526 LPFKGKTMAMIFAKPSMRTRVSFETGFF 609
           LPFKGKTMAMIFAKPSMRTRVSFETGFF
Sbjct: 111 LPFKGKTMAMIFAKPSMRTRVSFETGFF 138


>ref|XP_002281919.1| PREDICTED: ornithine carbamoyltransferase, chloroplastic [Vitis
           vinifera] gi|302142520|emb|CBI19723.3| unnamed protein
           product [Vitis vinifera]
          Length = 378

 Score =  147 bits (371), Expect = 1e-33
 Identities = 84/139 (60%), Positives = 99/139 (71%), Gaps = 7/139 (5%)
 Frame = +1

Query: 214 MAAISCSYSVRXXXXXXXXXXXXXXGQTIQYSLHFP-VKLSNSG------HRISCQTSAS 372
           MAAI+   ++R              GQ  +    FP + LS+S        RISCQTS++
Sbjct: 1   MAAITSHCALRSDCAPFSSSSSSFSGQAFRQPAPFPGISLSSSAISPTLRRRISCQTSSA 60

Query: 373 AAPVSSLVNGKAKAGLKDFIHISDFDKDTIMKILNRAAEVKALLKSGDRTFLPFKGKTMA 552
            +P SS VN K K+GLKDF+HI+DFDK TI+KIL+RA EVKALLKSG+RTFLPFKGKTMA
Sbjct: 61  ISP-SSAVNVKEKSGLKDFLHINDFDKTTILKILDRALEVKALLKSGERTFLPFKGKTMA 119

Query: 553 MIFAKPSMRTRVSFETGFF 609
           MIFAKPSMRTRVSFETGFF
Sbjct: 120 MIFAKPSMRTRVSFETGFF 138


>gb|ABK93198.1| unknown [Populus trichocarpa]
          Length = 378

 Score =  144 bits (363), Expect = 1e-32
 Identities = 74/91 (81%), Positives = 82/91 (90%), Gaps = 3/91 (3%)
 Frame = +1

Query: 346 RISCQTSASAA---PVSSLVNGKAKAGLKDFIHISDFDKDTIMKILNRAAEVKALLKSGD 516
           RISCQ S+S+A   P  S VNG AKAG++DF+HISDFDK TIMKIL+RAAEVKA++KSGD
Sbjct: 48  RISCQISSSSATSPPPPSSVNGPAKAGMEDFLHISDFDKATIMKILDRAAEVKAVIKSGD 107

Query: 517 RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 609
           RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF
Sbjct: 108 RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 138


>ref|XP_002307666.1| predicted protein [Populus trichocarpa] gi|222857115|gb|EEE94662.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  133 bits (334), Expect = 3e-29
 Identities = 71/91 (78%), Positives = 79/91 (86%), Gaps = 3/91 (3%)
 Frame = +1

Query: 346 RISCQTSASAA---PVSSLVNGKAKAGLKDFIHISDFDKDTIMKILNRAAEVKALLKSGD 516
           RISCQ S+S+A   P  S VN    AG++DF+HISDFDK TIMKIL+RAAEVKA++KSGD
Sbjct: 48  RISCQISSSSATSPPPPSSVN----AGMEDFLHISDFDKATIMKILDRAAEVKAVIKSGD 103

Query: 517 RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 609
           RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF
Sbjct: 104 RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 134


>gb|ADN34186.1| ornithine carbamoyltransferase [Cucumis melo subsp. melo]
          Length = 378

 Score =  130 bits (326), Expect = 2e-28
 Identities = 74/136 (54%), Positives = 89/136 (65%)
 Frame = +1

Query: 202 SHTTMAAISCSYSVRXXXXXXXXXXXXXXGQTIQYSLHFPVKLSNSGHRISCQTSASAAP 381
           SH+T+ +   S S                G    ++L  P +       ISCQTSA++ P
Sbjct: 6   SHSTIPSHKHSLSTHFYSTKSLPRSVKFFGDVSGFALPTPSRFPLRFPSISCQTSATSPP 65

Query: 382 VSSLVNGKAKAGLKDFIHISDFDKDTIMKILNRAAEVKALLKSGDRTFLPFKGKTMAMIF 561
             SL + K K   KDF+H+SDFDK T++KIL+RA EVKA LKSGDR+FLPFKGKTMAMIF
Sbjct: 66  --SLAS-KVKTEKKDFLHLSDFDKSTLLKILDRAVEVKAQLKSGDRSFLPFKGKTMAMIF 122

Query: 562 AKPSMRTRVSFETGFF 609
           AKPSMRTRVSFETGFF
Sbjct: 123 AKPSMRTRVSFETGFF 138


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