BLASTX nr result

ID: Cimicifuga21_contig00009878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009878
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533575.1| conserved hypothetical protein [Ricinus comm...   345   8e-93
emb|CAN81556.1| hypothetical protein VITISV_040398 [Vitis vinife...   343   3e-92
ref|XP_003635545.1| PREDICTED: UPF0308 protein At2g37240, chloro...   342   9e-92
ref|XP_002320012.1| predicted protein [Populus trichocarpa] gi|2...   342   9e-92
ref|XP_002263959.2| PREDICTED: UPF0308 protein At2g37240, chloro...   338   1e-90

>ref|XP_002533575.1| conserved hypothetical protein [Ricinus communis]
           gi|223526552|gb|EEF28810.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score =  345 bits (886), Expect = 8e-93
 Identities = 169/229 (73%), Positives = 193/229 (84%), Gaps = 8/229 (3%)
 Frame = -3

Query: 875 STPSSFNLKSKKKQ-TRPYFLTTT-------RASVSESVGAIGEILGDVSIFTAAGEPVM 720
           S+P S N  S +    +P   T+T       RAS S+  G IG++LGDV+IFTAAGEPVM
Sbjct: 27  SSPKSLNFTSHQFPFPKPITNTSTSTTGLIMRASSSDYAGNIGDVLGDVTIFTAAGEPVM 86

Query: 719 FKQLWDQEEGIAVVALLRHFGCPCCWELASALKDSKQKFDSAGVKLIAVGVGTPNKAQIL 540
           FK LWDQ EGIAVVALLRHFGCPCCWELAS LK++K KFDSAGVKLIA+GVG PNKA++L
Sbjct: 87  FKNLWDQNEGIAVVALLRHFGCPCCWELASVLKEAKSKFDSAGVKLIAIGVGAPNKARML 146

Query: 539 AEQLPFPLDCLYCDPDRKAYDALGLYYGLGRTFFNPASAKVFSRFDTLREAVKNYTIKAT 360
           A++LPFP+DCLY DP+R+AY+ LGLYYG GRTFFNPASAKVFSRFD+LR+AVKNYTI+AT
Sbjct: 147 ADRLPFPMDCLYADPNREAYNVLGLYYGFGRTFFNPASAKVFSRFDSLRQAVKNYTIEAT 206

Query: 359 PDDRSSVLQQGGMFVFKGKQLLYSRKDEGTGDHASLKDVLDICCSVSVA 213
           PDDRS VLQQGGMFVFKGKQLLY+RKDEGTGDHASL DV D+CC V VA
Sbjct: 207 PDDRSGVLQQGGMFVFKGKQLLYARKDEGTGDHASLDDVFDVCCKVPVA 255


>emb|CAN81556.1| hypothetical protein VITISV_040398 [Vitis vinifera]
           gi|342160848|gb|AEL16460.1| type II peroxiredoxin 1
           [Vitis vinifera]
          Length = 256

 Score =  343 bits (881), Expect = 3e-92
 Identities = 170/236 (72%), Positives = 192/236 (81%), Gaps = 11/236 (4%)
 Frame = -3

Query: 887 PLSSSTPSSF----------NLKSKKK-QTRPYFLTTTRASVSESVGAIGEILGDVSIFT 741
           P S   PS F          + KS+K     P  L    +S S+    IGEILG+VSIFT
Sbjct: 21  PPSGRLPSQFPRVCHVKTRVSFKSRKTTDITPNLLVRASSSSSDFTSTIGEILGEVSIFT 80

Query: 740 AAGEPVMFKQLWDQEEGIAVVALLRHFGCPCCWELASALKDSKQKFDSAGVKLIAVGVGT 561
           A+GEPV+FK LWDQEEG+AVVALLRHFGCPCCW+LASALK+SK++FDSAGVKLIAVGVGT
Sbjct: 81  ASGEPVLFKDLWDQEEGMAVVALLRHFGCPCCWDLASALKESKERFDSAGVKLIAVGVGT 140

Query: 560 PNKAQILAEQLPFPLDCLYCDPDRKAYDALGLYYGLGRTFFNPASAKVFSRFDTLREAVK 381
           P+KA+ILAE+LPFPLDCLY DPDRKAYD LGLYYG GRTFFNPASAKV  RF+ L++AVK
Sbjct: 141 PDKARILAERLPFPLDCLYADPDRKAYDVLGLYYGFGRTFFNPASAKVLLRFEALQKAVK 200

Query: 380 NYTIKATPDDRSSVLQQGGMFVFKGKQLLYSRKDEGTGDHASLKDVLDICCSVSVA 213
           NYTIKATPDD+SSVLQQGGMFVFKGKQL+Y+RKDEGTGDHA L DV D+CC V VA
Sbjct: 201 NYTIKATPDDKSSVLQQGGMFVFKGKQLVYARKDEGTGDHAPLDDVFDVCCKVPVA 256


>ref|XP_003635545.1| PREDICTED: UPF0308 protein At2g37240, chloroplastic [Vitis
           vinifera] gi|296087029|emb|CBI33293.3| unnamed protein
           product [Vitis vinifera]
          Length = 256

 Score =  342 bits (877), Expect = 9e-92
 Identities = 170/236 (72%), Positives = 192/236 (81%), Gaps = 11/236 (4%)
 Frame = -3

Query: 887 PLSSSTPSSF----------NLKSKKK-QTRPYFLTTTRASVSESVGAIGEILGDVSIFT 741
           P SS  PS F          + KS+K     P  L    +S S+    IGEIL +VSIFT
Sbjct: 21  PPSSRLPSQFPRVCHVKTRVSFKSRKTTDITPNLLVRASSSSSDFTSTIGEILREVSIFT 80

Query: 740 AAGEPVMFKQLWDQEEGIAVVALLRHFGCPCCWELASALKDSKQKFDSAGVKLIAVGVGT 561
           A+GEPV+FK LWDQEEG+AVVALLRHFGCPCCW+LASALK+SK++FDSAGVKLIAVGVGT
Sbjct: 81  ASGEPVLFKDLWDQEEGMAVVALLRHFGCPCCWDLASALKESKERFDSAGVKLIAVGVGT 140

Query: 560 PNKAQILAEQLPFPLDCLYCDPDRKAYDALGLYYGLGRTFFNPASAKVFSRFDTLREAVK 381
           P+KA+ILAE+LPFPLDCLY DPDRKAYD LGLYYG GRTFFNPASAKV  RF+ L++AVK
Sbjct: 141 PDKARILAERLPFPLDCLYADPDRKAYDVLGLYYGFGRTFFNPASAKVLLRFEALQKAVK 200

Query: 380 NYTIKATPDDRSSVLQQGGMFVFKGKQLLYSRKDEGTGDHASLKDVLDICCSVSVA 213
           NYTIKATPDD+SSVLQQGGMFVFKGKQL+Y+RKDEGTGDHA L DV D+CC V VA
Sbjct: 201 NYTIKATPDDKSSVLQQGGMFVFKGKQLVYARKDEGTGDHAPLDDVFDVCCKVPVA 256


>ref|XP_002320012.1| predicted protein [Populus trichocarpa] gi|222860785|gb|EEE98327.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  342 bits (877), Expect = 9e-92
 Identities = 161/197 (81%), Positives = 178/197 (90%)
 Frame = -3

Query: 803 ASVSESVGAIGEILGDVSIFTAAGEPVMFKQLWDQEEGIAVVALLRHFGCPCCWELASAL 624
           AS S     IGE+L DVSIFT AG+PVMFK LWDQ EGIAVVALLRHFGCPCCWELAS+L
Sbjct: 3   ASASSFSADIGEVLSDVSIFTTAGQPVMFKDLWDQNEGIAVVALLRHFGCPCCWELASSL 62

Query: 623 KDSKQKFDSAGVKLIAVGVGTPNKAQILAEQLPFPLDCLYCDPDRKAYDALGLYYGLGRT 444
           K+SK+KFDS+GVKLIA+GVGTPNKA++LAE+LPFP+DCLY DP+RKAYD LGLYYGLGRT
Sbjct: 63  KESKEKFDSSGVKLIAIGVGTPNKARLLAERLPFPMDCLYADPERKAYDVLGLYYGLGRT 122

Query: 443 FFNPASAKVFSRFDTLREAVKNYTIKATPDDRSSVLQQGGMFVFKGKQLLYSRKDEGTGD 264
           FFNPASAKVFSRFD LR+AVKNYTI+ATPDDRS VLQQGGMFVFKGKQLLY+RKDEGTGD
Sbjct: 123 FFNPASAKVFSRFDALRKAVKNYTIEATPDDRSGVLQQGGMFVFKGKQLLYARKDEGTGD 182

Query: 263 HASLKDVLDICCSVSVA 213
           HA L D+ +ICC V VA
Sbjct: 183 HAPLDDIFEICCKVPVA 199


>ref|XP_002263959.2| PREDICTED: UPF0308 protein At2g37240, chloroplastic [Vitis
           vinifera]
          Length = 255

 Score =  338 bits (868), Expect = 1e-90
 Identities = 163/225 (72%), Positives = 190/225 (84%)
 Frame = -3

Query: 887 PLSSSTPSSFNLKSKKKQTRPYFLTTTRASVSESVGAIGEILGDVSIFTAAGEPVMFKQL 708
           P +    +S +LKS +     + L    +S S+    IGEILG+VS+FTA+GE V+FK L
Sbjct: 31  PRAPHVKTSLSLKSTEAPNIRHSLLVRASSTSDFNPDIGEILGEVSVFTASGESVLFKDL 90

Query: 707 WDQEEGIAVVALLRHFGCPCCWELASALKDSKQKFDSAGVKLIAVGVGTPNKAQILAEQL 528
           WDQ+EG+AVVALLRHFGCPCCW+LASALK+SK++FDSAGVKLIAVGVGTP+KA+ILAE+L
Sbjct: 91  WDQKEGMAVVALLRHFGCPCCWDLASALKESKERFDSAGVKLIAVGVGTPDKARILAERL 150

Query: 527 PFPLDCLYCDPDRKAYDALGLYYGLGRTFFNPASAKVFSRFDTLREAVKNYTIKATPDDR 348
           PFPLDCLY DPDRKAYD LGLYYG GRTFFNPASAKV  RF+ L++AVKNYTIKATPDD+
Sbjct: 151 PFPLDCLYADPDRKAYDVLGLYYGFGRTFFNPASAKVLLRFEALQKAVKNYTIKATPDDK 210

Query: 347 SSVLQQGGMFVFKGKQLLYSRKDEGTGDHASLKDVLDICCSVSVA 213
           SSVLQQGGMFVFKGKQL+Y+RKDEGTGDHA L DV D+CC V VA
Sbjct: 211 SSVLQQGGMFVFKGKQLVYARKDEGTGDHAPLDDVFDVCCKVPVA 255


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