BLASTX nr result

ID: Cimicifuga21_contig00009853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009853
         (1567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515579.1| 3-hydroxybutyryl-CoA dehydratase, putative [...    67   1e-08
ref|XP_003530649.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...    65   5e-08
ref|XP_003525261.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...    64   1e-07
gb|AFK43867.1| unknown [Lotus japonicus]                               64   1e-07
ref|XP_004139338.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...    61   9e-07

>ref|XP_002515579.1| 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis]
           gi|223545523|gb|EEF47028.1| 3-hydroxybutyryl-CoA
           dehydratase, putative [Ricinus communis]
          Length = 416

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 34/50 (68%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
 Frame = +1

Query: 169 SFNTSFDSGRAFSVMAS--NDDFVKGSVHSNGVAIITLDRPKALNAMDLD 312
           SF  S+ S R F++MAS  +D+FVKG+VH NGVA+ITLDRPKALNAM+LD
Sbjct: 26  SFRKSYLSCRTFAIMASASSDNFVKGNVHQNGVAVITLDRPKALNAMNLD 75


>ref|XP_003530649.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
           mitochondrial-like [Glycine max]
          Length = 408

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = +1

Query: 163 FKSFNTSFDSGRAFSVMASNDDFVKGSVHSNGVAIITLDRPKALNAMDLD 312
           F  F  SF S RAFS MA  ++FVKGSVH NGVA+ITLDRPKALNAM+LD
Sbjct: 17  FSRFQPSF-SLRAFSAMA--EEFVKGSVHQNGVAVITLDRPKALNAMNLD 63


>ref|XP_003525261.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
           mitochondrial-like isoform 1 [Glycine max]
          Length = 408

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = +1

Query: 163 FKSFNTSFDSGRAFSVMASNDDFVKGSVHSNGVAIITLDRPKALNAMDLD 312
           F  F  SF S RAFS MA  ++FVKG+VH NGVA+ITLDRPKALNAM+LD
Sbjct: 17  FSRFQPSF-SLRAFSAMA--EEFVKGTVHQNGVAVITLDRPKALNAMNLD 63


>gb|AFK43867.1| unknown [Lotus japonicus]
          Length = 330

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +1

Query: 211 MASNDDFVKGSVHSNGVAIITLDRPKALNAMDLD 312
           MA+ DDFVKG+VHSNGVA+ITLDRPKALNAM+LD
Sbjct: 1   MAAEDDFVKGTVHSNGVAVITLDRPKALNAMNLD 34


>ref|XP_004139338.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
           mitochondrial-like [Cucumis sativus]
           gi|449518115|ref|XP_004166089.1| PREDICTED:
           3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
           mitochondrial-like [Cucumis sativus]
          Length = 424

 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
 Frame = +1

Query: 190 SGRAFSVMASNDD-FVKGSVHSNGVAIITLDRPKALNAMDLD 312
           S R  + MA  DD FVKGSVH NGVA+ITLDRPKALNAM+LD
Sbjct: 39  SRRTLAAMAGTDDQFVKGSVHPNGVAVITLDRPKALNAMNLD 80


Top