BLASTX nr result

ID: Cimicifuga21_contig00009852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009852
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267...   138   4e-31
ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002516035.1| conserved hypothetical protein [Ricinus comm...   124   8e-27
ref|XP_002324817.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002324818.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26

>ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera]
           gi|296081886|emb|CBI20891.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/122 (55%), Positives = 85/122 (69%), Gaps = 9/122 (7%)
 Frame = -1

Query: 340 NGSEGVAYSPLPDEPSNDTQ---------KVSILENVYWKEXXXXXXXXXXXXXLQIAKN 188
           NG+E V Y PLP  PSN TQ         +VSI+ENVYWKE             LQIAKN
Sbjct: 223 NGTEEVEYKPLPSGPSNGTQNATNKSKEPEVSIIENVYWKELGLLVFVWVAFLALQIAKN 282

Query: 187 ETTTCSVAYWVLNLLQVPVAVGVTLYEAIGLYKGRKVIASKGAVDTNWKVHQLVIYSFFG 8
            T TCS+AYWVLN +Q+PV+VGV+LYEA+ LYKGR++IASKG   TN++VHQL++Y F G
Sbjct: 283 NTATCSMAYWVLNFMQIPVSVGVSLYEAVSLYKGRRIIASKGDAGTNFRVHQLILYCFCG 342

Query: 7   IV 2
           ++
Sbjct: 343 VL 344


>ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  125 bits (313), Expect = 5e-27
 Identities = 67/124 (54%), Positives = 81/124 (65%), Gaps = 8/124 (6%)
 Frame = -1

Query: 349 LKSNGSEG--VAYSPLPDEPSNDTQK------VSILENVYWKEXXXXXXXXXXXXXLQIA 194
           L+S+G+    V Y PLP  PSN  QK      VSILENVYWKE             LQI 
Sbjct: 222 LESDGASAGEVEYKPLPGGPSNSPQKADKEEEVSILENVYWKELGLLVFVWVAFLVLQIT 281

Query: 193 KNETTTCSVAYWVLNLLQVPVAVGVTLYEAIGLYKGRKVIASKGAVDTNWKVHQLVIYSF 14
           K  T+TCS  YWVLNLLQ+PV+VGV++YEA+ LYKG ++IASKG   TN+ + QLVIY  
Sbjct: 282 KEGTSTCSTTYWVLNLLQIPVSVGVSMYEAVSLYKGHRIIASKGTEGTNFTILQLVIYCL 341

Query: 13  FGIV 2
           FGI+
Sbjct: 342 FGIL 345


>ref|XP_002516035.1| conserved hypothetical protein [Ricinus communis]
           gi|223544940|gb|EEF46455.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/127 (51%), Positives = 82/127 (64%), Gaps = 11/127 (8%)
 Frame = -1

Query: 349 LKSNG--SEGVAYSPLPDEPSNDT---------QKVSILENVYWKEXXXXXXXXXXXXXL 203
           L SNG  SE V Y PLP  P+N T         ++VSI+ENV WKE             L
Sbjct: 223 LASNGGASEEVEYKPLPGGPTNGTGPESNEPKREEVSIIENVRWKELGILFAVWLIILAL 282

Query: 202 QIAKNETTTCSVAYWVLNLLQVPVAVGVTLYEAIGLYKGRKVIASKGAVDTNWKVHQLVI 23
           +I KN TTTCSV YWV NLLQ+PVA+GV+ Y+A+ LYKG++ IASKG   TNW+VHQLV+
Sbjct: 283 EITKNYTTTCSVVYWVCNLLQIPVALGVSSYQAVSLYKGKRRIASKGEAGTNWRVHQLVL 342

Query: 22  YSFFGIV 2
           Y   G++
Sbjct: 343 YCACGVL 349


>ref|XP_002324817.1| predicted protein [Populus trichocarpa] gi|222866251|gb|EEF03382.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
 Frame = -1

Query: 343 SNGSEGVAYSPLPDEPSND---TQKVSILENVYWKEXXXXXXXXXXXXXLQIAKNETTTC 173
           + GSE V Y PLPD   ND     KV+IL+N+YWKE             +QIAKN T  C
Sbjct: 223 TGGSEEVEYKPLPDGQGNDPPKASKVTILQNIYWKELGLLVFVWVSYLAVQIAKNYTAPC 282

Query: 172 SVAYWVLNLLQVPVAVGVTLYEAIGLYKGRKVIASKGAVDTNWKVHQLVIYSFFGIV 2
           S  +WVLNLLQ+P+++GV LYEAIGLYKGR+ I+SKG    +W+VH+L+++S  G+V
Sbjct: 283 STTFWVLNLLQIPISIGVFLYEAIGLYKGRRRISSKGDEIMDWQVHRLLMFSVCGVV 339


>ref|XP_002324818.1| predicted protein [Populus trichocarpa] gi|222866252|gb|EEF03383.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/124 (51%), Positives = 81/124 (65%), Gaps = 8/124 (6%)
 Frame = -1

Query: 349 LKSNGSEG--VAYSPLPDEPSNDTQK------VSILENVYWKEXXXXXXXXXXXXXLQIA 194
           L+SNG++   V Y PL   PSN  QK      +++ ENVYWKE             LQIA
Sbjct: 192 LESNGTDAGEVEYKPLRGGPSNSPQKETKELEITVFENVYWKELGLLVFVWVAFLVLQIA 251

Query: 193 KNETTTCSVAYWVLNLLQVPVAVGVTLYEAIGLYKGRKVIASKGAVDTNWKVHQLVIYSF 14
           K  T TCS+ YWVLNLLQ+PV+VGVTLYE + LYKGR+V+ASKG   TN++V QL+ Y  
Sbjct: 252 KESTYTCSIGYWVLNLLQIPVSVGVTLYEVVSLYKGRRVVASKGDEGTNFRVLQLMTYCA 311

Query: 13  FGIV 2
           FG++
Sbjct: 312 FGVL 315


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