BLASTX nr result

ID: Cimicifuga21_contig00009845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009845
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283702.1| PREDICTED: uncharacterized protein LOC100259...   220   7e-55
ref|NP_001239718.1| uncharacterized protein LOC100818449 [Glycin...   199   1e-48
ref|XP_002531853.1| 60S ribosomal protein L34, putative [Ricinus...   199   2e-48
ref|XP_004148702.1| PREDICTED: uncharacterized protein LOC101215...   198   2e-48
gb|AFK40389.1| unknown [Medicago truncatula]                          192   1e-46

>ref|XP_002283702.1| PREDICTED: uncharacterized protein LOC100259485 [Vitis vinifera]
          Length = 231

 Score =  220 bits (560), Expect = 7e-55
 Identities = 117/234 (50%), Positives = 149/234 (63%), Gaps = 7/234 (2%)
 Frame = +3

Query: 327  MVNYRDSIAVCNSTNMA-------NSWKLADLSLNSKQIQRNRKQPIPPRPSQSNNLPFC 485
            MV +  SI+VCNS + +       NS +    S  +    RNRK P  P    S  +P C
Sbjct: 1    MVYFHSSISVCNSVDQSGIMASSLNSGEACSKSRQNNHACRNRKTPNSPN---SAKIPDC 57

Query: 486  GRSRTGLIDVLYLIAVVSAFGFLIFPPIMLLFEKFISICGSAFSVVKYEVYRAPMVYLFI 665
             RSR+ +ID++ LIAVV A GFL+FP + ++  +F+ + G+   + K EV RAPMVY  +
Sbjct: 58   SRSRSAMIDLVMLIAVVGACGFLLFPYVKVVANEFVKLVGAIIYLTKEEVSRAPMVYGSL 117

Query: 666  GIXXXXXXXXXXXXXXXXNNTCGNPNCRGLRKTPEFDIQVETEDSLMHSTSYVIEGAGKG 845
            G+                +  CG PNCRGLRK  EFDIQ+ETE+ + +S+S V +G  KG
Sbjct: 118  GVSVLFAAIAVWGILICTSRKCGKPNCRGLRKAAEFDIQLETEECVKNSSSLVKDGLKKG 177

Query: 846  GFRLSQDHHRELEAELKKLAPPNGRAVLLFRASCGCPVGRMEVPGPKKLRKVKK 1007
             F L +DHHRELEAELKK+APPNGRAVL+FRA CGC VGRMEVPGPKKLRK KK
Sbjct: 178  LFELPRDHHRELEAELKKMAPPNGRAVLVFRARCGCSVGRMEVPGPKKLRKFKK 231


>ref|NP_001239718.1| uncharacterized protein LOC100818449 [Glycine max]
            gi|255642403|gb|ACU21465.1| unknown [Glycine max]
          Length = 243

 Score =  199 bits (506), Expect = 1e-48
 Identities = 115/242 (47%), Positives = 146/242 (60%), Gaps = 15/242 (6%)
 Frame = +3

Query: 327  MVNYRDSIAVCNS----TNMANSWKLADLSLNSKQI---QRNRKQPIPPRPSQSNNLPFC 485
            MV +  SI++C S    ++MANS   AD    S+QI   Q+NR+ P     S S  +P C
Sbjct: 1    MVYFHSSISLCKSVDQSSSMANSICSADFGSKSRQINHLQKNRRTPSSSSSSNSLQIPPC 60

Query: 486  GRSRTGLIDVLYLIAVVSAFGFLIFPPIMLLFEKFISICGSAFSVVKYEVYRAPMVYLFI 665
             RSR+ ++DV+  IAVV A GFL FP +  L  K   +      ++K EV  AP +Y+ I
Sbjct: 61   DRSRSAMVDVVMFIAVVCACGFLFFPYVEFLVTKCYEVIKVVVFLIKEEVSVAPWIYVSI 120

Query: 666  GIXXXXXXXXXXXXXXXXNNTCGNPNCRGLRKTPEFDIQVETEDSLMHSTS----YVIEG 833
            G+                   CGNPNC+GLRK  EFDIQ+ETED + +S S       +G
Sbjct: 121  GLSVVFAALATWGVVACTTRKCGNPNCKGLRKAAEFDIQLETEDCVKNSASSSSNVAKDG 180

Query: 834  AG---KGGFRLSQDHHRELEAELKKLAPPNGRAVLLFRASCGCPVGRMEVPGPKK-LRKV 1001
            AG   KG F L +DHHRELEAELKK+APPNGRAVL+ RA CGC VGR+EVPGP+K LRK+
Sbjct: 181  AGGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLVLRARCGCSVGRLEVPGPRKHLRKI 240

Query: 1002 KK 1007
             K
Sbjct: 241  NK 242


>ref|XP_002531853.1| 60S ribosomal protein L34, putative [Ricinus communis]
            gi|223528503|gb|EEF30531.1| 60S ribosomal protein L34,
            putative [Ricinus communis]
          Length = 235

 Score =  199 bits (505), Expect = 2e-48
 Identities = 108/236 (45%), Positives = 150/236 (63%), Gaps = 9/236 (3%)
 Frame = +3

Query: 327  MVNYRDSIAVCNSTNMANSWKLADLSLNSKQIQ---RNRKQPIPPRPSQSNN-----LPF 482
            MV +  SI+VCNS + + +  +A+ S+NS ++    +N+      R   +N+     +P 
Sbjct: 1    MVYFHSSISVCNSVDQSAATVMAN-SVNSNELHPKLKNKNHGQNGRKMNNNHVNCSSIPV 59

Query: 483  CGRSRTGLIDVLYLIAVVSAFGFLIFPPIMLLFEKFISICGSAFSVVKYEVYRAPMVYLF 662
            C RSR+ ++DV+ LIAV++A GFL+FP I ++    I       S+VK E+ R+PM+Y  
Sbjct: 60   CDRSRSAVVDVVILIAVIAACGFLLFPYIKVVTFCLIKFVTVMHSLVKEEILRSPMIYAS 119

Query: 663  IGIXXXXXXXXXXXXXXXXNNTCGNPNCRGLRKTPEFDIQVETEDSLMHST-SYVIEGAG 839
            IG+                   CGNPNC+GLRK  EFDIQ+ETE+ + +S  S V +G  
Sbjct: 120  IGVGTFCAAIAVWIVFTCTTRKCGNPNCKGLRKAAEFDIQLETEECVKNSNGSLVKDGVK 179

Query: 840  KGGFRLSQDHHRELEAELKKLAPPNGRAVLLFRASCGCPVGRMEVPGPKKLRKVKK 1007
            +G F L +DHHRELEAELKK+APPNGRAVL+FRA CGC VGR+EVPG KK +K+KK
Sbjct: 180  RGLFELPRDHHRELEAELKKMAPPNGRAVLVFRARCGCSVGRLEVPGTKKQKKIKK 235


>ref|XP_004148702.1| PREDICTED: uncharacterized protein LOC101215142 [Cucumis sativus]
            gi|449517213|ref|XP_004165640.1| PREDICTED:
            uncharacterized LOC101215142 [Cucumis sativus]
          Length = 225

 Score =  198 bits (504), Expect = 2e-48
 Identities = 114/232 (49%), Positives = 146/232 (62%), Gaps = 5/232 (2%)
 Frame = +3

Query: 327  MVNYRDSIAVCNS----TNMANSWKLADLSLNSKQIQRNRKQPIPPRPSQSNNLPFCGRS 494
            MV +  SI+VC S    T MA+S  LAD S  S    RN+K       S  +  P C RS
Sbjct: 1    MVYFPYSISVCKSVDQPTVMASSVNLADSSSKS----RNKKMTAS---STCSKFPVCHRS 53

Query: 495  RTGLIDVLYLIAVVSAFGFLIFPPIMLLFEKFISICGSAFSVVKYEVYRAPMVYLFIGIX 674
            R+ +ID++ LIAVV A GFL+FP + L+  + + I G+   ++  EV RAP +Y  IG+ 
Sbjct: 54   RSAVIDIVILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLS 113

Query: 675  XXXXXXXXXXXXXXXNNTCGNPNCRGLRKTPEFDIQVETEDSLMHSTSYVIEGAGKGGFR 854
                           +  CGNP C+GLRK  EFDIQ+ETE+ + +ST  V  G  KG F 
Sbjct: 114  IFCASLAAWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFE 173

Query: 855  LSQDHHRELEAELKKLAPPNGRAVLLFRASCGCPVGRMEVPGPKK-LRKVKK 1007
            L +DHHRELEAELKK+APPNGRAVL+FRA CGC VGR+EVPGP+K L+K+KK
Sbjct: 174  LPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225


>gb|AFK40389.1| unknown [Medicago truncatula]
          Length = 237

 Score =  192 bits (489), Expect = 1e-46
 Identities = 115/240 (47%), Positives = 146/240 (60%), Gaps = 13/240 (5%)
 Frame = +3

Query: 327  MVNYRDSIAVCNS-------TNMANSWKLADLSLNSKQ---IQRNRKQPIPPRPSQSNNL 476
            MV +  SI++C S       ++MANS +L      SKQ    QRNR+       S S  +
Sbjct: 1    MVYFHSSISLCKSVDQPPVQSSMANSIELGSKYSKSKQTNQFQRNRRNH---SLSNSVKI 57

Query: 477  PFCGRSRTGLIDVLYLIAVVSAFGFLIFPPIMLLFEKFISICGSAFSVVKYEVYRAPMVY 656
            P C RSR+ +I+V+  IAVV A GFL FP + LL  K   I      ++  EV  AP +Y
Sbjct: 58   PPCDRSRSAMINVVMFIAVVIACGFLFFPYVELLVIKSFQIMSMMCFLIMEEVSYAPYIY 117

Query: 657  LFIGIXXXXXXXXXXXXXXXXNNTCGNPNCRGLRKTPEFDIQVETEDSLMHSTSYVIEGA 836
            + IGI                +N CGNPNC+GL+K  EFDIQ+ETED + +S S+V +G 
Sbjct: 118  ISIGISVVCAALATWGVIVCTSNKCGNPNCKGLKKAAEFDIQLETEDCVKNSPSFVKDGG 177

Query: 837  --GKGGFRLSQDHHRELEAELKKLAPPNGRAVLLFRASCGCPVGRMEVPGP-KKLRKVKK 1007
               KG F L +DHH+ELEAELKK+AP NGRAVL+ RA CGC VGR+EVPGP KKLRK+KK
Sbjct: 178  VCKKGLFELPRDHHKELEAELKKMAPINGRAVLVLRARCGCSVGRLEVPGPAKKLRKIKK 237


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