BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009806
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein ...   365   1e-98
emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera]   360   4e-97
emb|CBI34852.3| unnamed protein product [Vitis vinifera]              350   4e-94
ref|XP_004168335.1| PREDICTED: ribosomal RNA-processing protein ...   340   3e-91
ref|XP_004142786.1| PREDICTED: ribosomal RNA-processing protein ...   340   3e-91

>ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein 8 [Vitis vinifera]
          Length = 263

 Score =  365 bits (936), Expect = 1e-98
 Identities = 177/243 (72%), Positives = 197/243 (81%)
 Frame = +2

Query: 158 KRRKIDGGGDSVSVKAPTSFLDKMKARLSGGHFRMINEKLYTCTGNEALDYFKDDPSLFN 337
           K  K+DG       K+ +SFLDKM+ARLSGGHFRMINEKLYTCTG+EAL YF++DP+LFN
Sbjct: 26  KHEKVDGKS-----KSSSSFLDKMRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFN 80

Query: 338 VYHTGYQEQMSHWPEQPVNIIIKWIKDHSPLLVVADFGCGDARLAKNVKNKVFSIDLVSS 517
           VYH GYQEQMSHWP+QPVNIIIKW+KDHSP L+VADFGCGDARLA+NVKNKVFS DLVSS
Sbjct: 81  VYHVGYQEQMSHWPQQPVNIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSS 140

Query: 518 DPSVLECDMSNTPLLSSSIDVAVFCLSLMGTNFPCYLREAQRVLKPSGWLLIAEVKSRFN 697
           DPSV+ CDMSNTPL SSSIDVAVFCLSLMGTNF  YL+EA RVLKP GWLLIAEVKSRF+
Sbjct: 141 DPSVIVCDMSNTPLESSSIDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFD 200

Query: 698 PNSGGADPNRFLKAVCELGFTSVSKDXXXXXXXXXXXXXXXXXXXXXXXIEWPELKPCLY 877
           P++GGADPNRF KA+C+LGFT  SKD                       I+WPELKPCLY
Sbjct: 201 PSNGGADPNRFSKAICKLGFTLESKDFSNKMFILLYFKKKEKQNSKVKEIDWPELKPCLY 260

Query: 878 KRR 886
           KRR
Sbjct: 261 KRR 263


>emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera]
          Length = 237

 Score =  360 bits (923), Expect = 4e-97
 Identities = 172/225 (76%), Positives = 189/225 (84%)
 Frame = +2

Query: 212 SFLDKMKARLSGGHFRMINEKLYTCTGNEALDYFKDDPSLFNVYHTGYQEQMSHWPEQPV 391
           SFLDKM+ARLSGGHFRMINEKLYTCTG+EAL YF++DP+LFNVYH GYQEQMSHWP+QPV
Sbjct: 13  SFLDKMRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHAGYQEQMSHWPQQPV 72

Query: 392 NIIIKWIKDHSPLLVVADFGCGDARLAKNVKNKVFSIDLVSSDPSVLECDMSNTPLLSSS 571
           NIIIKW+KDHSP L+VADFGCGDARLA+NVKNKVFS DLVSSDPSV+ CDMSNTPL SSS
Sbjct: 73  NIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTPLESSS 132

Query: 572 IDVAVFCLSLMGTNFPCYLREAQRVLKPSGWLLIAEVKSRFNPNSGGADPNRFLKAVCEL 751
           IDVAVFCLSLMGTNF  YL+EA RVLKP GWLLIAEVKSRF+P++GGADPNRF KA+C+L
Sbjct: 133 IDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSKAICKL 192

Query: 752 GFTSVSKDXXXXXXXXXXXXXXXXXXXXXXXIEWPELKPCLYKRR 886
           GFT  SKD                       I+WPELKPCLYKRR
Sbjct: 193 GFTLESKDFSNKMFILLYFKKKEKQNSKVKEIDWPELKPCLYKRR 237


>emb|CBI34852.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  350 bits (898), Expect = 4e-94
 Identities = 167/220 (75%), Positives = 184/220 (83%)
 Frame = +2

Query: 227 MKARLSGGHFRMINEKLYTCTGNEALDYFKDDPSLFNVYHTGYQEQMSHWPEQPVNIIIK 406
           M+ARLSGGHFRMINEKLYTCTG+EAL YF++DP+LFNVYH GYQEQMSHWP+QPVNIIIK
Sbjct: 1   MRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHVGYQEQMSHWPQQPVNIIIK 60

Query: 407 WIKDHSPLLVVADFGCGDARLAKNVKNKVFSIDLVSSDPSVLECDMSNTPLLSSSIDVAV 586
           W+KDHSP L+VADFGCGDARLA+NVKNKVFS DLVSSDPSV+ CDMSNTPL SSSIDVAV
Sbjct: 61  WLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTPLESSSIDVAV 120

Query: 587 FCLSLMGTNFPCYLREAQRVLKPSGWLLIAEVKSRFNPNSGGADPNRFLKAVCELGFTSV 766
           FCLSLMGTNF  YL+EA RVLKP GWLLIAEVKSRF+P++GGADPNRF KA+C+LGFT  
Sbjct: 121 FCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSKAICKLGFTLE 180

Query: 767 SKDXXXXXXXXXXXXXXXXXXXXXXXIEWPELKPCLYKRR 886
           SKD                       I+WPELKPCLYKRR
Sbjct: 181 SKDFSNKMFILLYFKKKEKQNSKVKEIDWPELKPCLYKRR 220


>ref|XP_004168335.1| PREDICTED: ribosomal RNA-processing protein 8-like [Cucumis
           sativus]
          Length = 283

 Score =  340 bits (873), Expect = 3e-91
 Identities = 159/236 (67%), Positives = 187/236 (79%)
 Frame = +2

Query: 179 GGDSVSVKAPTSFLDKMKARLSGGHFRMINEKLYTCTGNEALDYFKDDPSLFNVYHTGYQ 358
           G  ++ V   +SFLDKM+ARLSGGHFRM+NEKLYTCTG EAL+YFK+D  LF+VYHTGYQ
Sbjct: 48  GKKTLRVSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQ 107

Query: 359 EQMSHWPEQPVNIIIKWIKDHSPLLVVADFGCGDARLAKNVKNKVFSIDLVSSDPSVLEC 538
           EQM+HWPE PVN+IIKW+K+H P  +VADFGCGDARL+KNVKNKVFS DLVS DPSV+ C
Sbjct: 108 EQMTHWPELPVNLIIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIAC 167

Query: 539 DMSNTPLLSSSIDVAVFCLSLMGTNFPCYLREAQRVLKPSGWLLIAEVKSRFNPNSGGAD 718
           DMSNTPL S+S+DVAVFCLSLMG N+  YL EA+RVLKP GWLLI+EVKSRF+P++GGAD
Sbjct: 168 DMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGAD 227

Query: 719 PNRFLKAVCELGFTSVSKDXXXXXXXXXXXXXXXXXXXXXXXIEWPELKPCLYKRR 886
           P +F+KAVCELGF S  KD                       I+WP+LKPC+YKRR
Sbjct: 228 PKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKTSEGKDIDWPQLKPCMYKRR 283


>ref|XP_004142786.1| PREDICTED: ribosomal RNA-processing protein 8-like [Cucumis
           sativus]
          Length = 283

 Score =  340 bits (873), Expect = 3e-91
 Identities = 159/236 (67%), Positives = 187/236 (79%)
 Frame = +2

Query: 179 GGDSVSVKAPTSFLDKMKARLSGGHFRMINEKLYTCTGNEALDYFKDDPSLFNVYHTGYQ 358
           G  ++ V   +SFLDKM+ARLSGGHFRM+NEKLYTCTG EAL+YFK+D  LF+VYHTGYQ
Sbjct: 48  GKKTLRVSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQ 107

Query: 359 EQMSHWPEQPVNIIIKWIKDHSPLLVVADFGCGDARLAKNVKNKVFSIDLVSSDPSVLEC 538
           EQM+HWPE PVN+IIKW+K+H P  +VADFGCGDARL+KNVKNKVFS DLVS DPSV+ C
Sbjct: 108 EQMTHWPELPVNLIIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIAC 167

Query: 539 DMSNTPLLSSSIDVAVFCLSLMGTNFPCYLREAQRVLKPSGWLLIAEVKSRFNPNSGGAD 718
           DMSNTPL S+S+DVAVFCLSLMG N+  YL EA+RVLKP GWLLI+EVKSRF+P++GGAD
Sbjct: 168 DMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGAD 227

Query: 719 PNRFLKAVCELGFTSVSKDXXXXXXXXXXXXXXXXXXXXXXXIEWPELKPCLYKRR 886
           P +F+KAVCELGF S  KD                       I+WP+LKPC+YKRR
Sbjct: 228 PKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKTSEGKDIDWPQLKPCMYKRR 283