BLASTX nr result

ID: Cimicifuga21_contig00009794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009794
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256...    66   9e-10
emb|CBI25607.3| unnamed protein product [Vitis vinifera]               66   9e-10
ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-08
ref|XP_002523537.1| structural constituent of ribosome, putative...    62   6e-08
gb|AFK36652.1| unknown [Lotus japonicus]                               61   8e-08

>ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
          Length = 162

 Score = 65.9 bits (159), Expect(2) = 9e-10
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = +2

Query: 2   KELHYLN*EDRLLRWLLVKHRNTKYGLEFLSE 97
           KELHYLN EDRLLRWLLVKHRNTKYGLEFL+E
Sbjct: 77  KELHYLNKEDRLLRWLLVKHRNTKYGLEFLNE 108



 Score = 21.9 bits (45), Expect(2) = 9e-10
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 97  SEEDGQGDLGSFPRSNIY 150
           +E+D + +L  FPRS ++
Sbjct: 107 NEDDVRSELSKFPRSTLF 124


>emb|CBI25607.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score = 65.9 bits (159), Expect(2) = 9e-10
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = +2

Query: 2   KELHYLN*EDRLLRWLLVKHRNTKYGLEFLSE 97
           KELHYLN EDRLLRWLLVKHRNTKYGLEFL+E
Sbjct: 71  KELHYLNKEDRLLRWLLVKHRNTKYGLEFLNE 102



 Score = 21.9 bits (45), Expect(2) = 9e-10
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 97  SEEDGQGDLGSFPRSNIY 150
           +E+D + +L  FPRS ++
Sbjct: 101 NEDDVRSELSKFPRSTLF 118


>ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|222866591|gb|EEF03722.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 58.9 bits (141), Expect(2) = 3e-08
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +2

Query: 2   KELHYLN*EDRLLRWLLVKHRNTKYGLEFLSE 97
           KELHYLN EDRLLRWLLVKHR+ K+GLEF+ E
Sbjct: 77  KELHYLNKEDRLLRWLLVKHRDIKFGLEFMDE 108



 Score = 23.9 bits (50), Expect(2) = 3e-08
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 100 EEDGQGDLGSFPRSNIY 150
           +EDG+ D   FPR +I+
Sbjct: 110 DEDGEFDFSEFPRDSIF 126


>ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223537244|gb|EEF38876.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 162

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +2

Query: 2   KELHYLN*EDRLLRWLLVKHRNTKYGLEFLSE 97
           KELHYLN EDRLLRWLLVKHR+TKYGL+F+ E
Sbjct: 77  KELHYLNKEDRLLRWLLVKHRDTKYGLDFMDE 108


>gb|AFK36652.1| unknown [Lotus japonicus]
          Length = 149

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +2

Query: 2   KELHYLN*EDRLLRWLLVKHRNTKYGLEFLSE 97
           KELHYLN EDRLLRWLLVKHRNT +GL+FL+E
Sbjct: 77  KELHYLNKEDRLLRWLLVKHRNTSFGLDFLAE 108


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