BLASTX nr result

ID: Cimicifuga21_contig00009767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009767
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30945.3| unnamed protein product [Vitis vinifera]              105   1e-20
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi...   105   1e-20
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]   105   1e-20
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,...   104   2e-20
ref|XP_002316718.1| predicted protein [Populus trichocarpa] gi|2...    99   7e-19

>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  105 bits (261), Expect = 1e-20
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = -3

Query: 725 NTCHMLMECYLNKGDPLSSYKVACRMFDRNLIPDLNLCKKVSKILGSKGKSKEAERLLIR 546
           NTCHML+E YL+KG PL SY VACRMF+RNLIPDL LC+KVSK L  +GKS+EA++L++R
Sbjct: 722 NTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILR 781

Query: 545 FVERGLLSP 519
           FVERG +SP
Sbjct: 782 FVERGRISP 790


>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  105 bits (261), Expect = 1e-20
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = -3

Query: 725 NTCHMLMECYLNKGDPLSSYKVACRMFDRNLIPDLNLCKKVSKILGSKGKSKEAERLLIR 546
           NTCHML+E YL+KG PL SY VACRMF+RNLIPDL LC+KVSK L  +GKS+EA++L++R
Sbjct: 659 NTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILR 718

Query: 545 FVERGLLSP 519
           FVERG +SP
Sbjct: 719 FVERGRISP 727


>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  105 bits (261), Expect = 1e-20
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = -3

Query: 725 NTCHMLMECYLNKGDPLSSYKVACRMFDRNLIPDLNLCKKVSKILGSKGKSKEAERLLIR 546
           NTCHML+E YL+KG PL SY VACRMF+RNLIPDL LC+KVSK L  +GKS+EA++L++R
Sbjct: 659 NTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILR 718

Query: 545 FVERGLLSP 519
           FVERG +SP
Sbjct: 719 FVERGRISP 727


>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 737

 Score =  104 bits (259), Expect = 2e-20
 Identities = 48/70 (68%), Positives = 61/70 (87%)
 Frame = -3

Query: 725 NTCHMLMECYLNKGDPLSSYKVACRMFDRNLIPDLNLCKKVSKILGSKGKSKEAERLLIR 546
           NTCHMLME YL+KG PLS+YKVACRMFDRNLIPDL LC+K+SK L  +GK +EA+ L+++
Sbjct: 661 NTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQ 720

Query: 545 FVERGLLSPN 516
           FV+RG +SP+
Sbjct: 721 FVQRGNISPD 730


>ref|XP_002316718.1| predicted protein [Populus trichocarpa] gi|222859783|gb|EEE97330.1|
           predicted protein [Populus trichocarpa]
          Length = 684

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -3

Query: 725 NTCHMLMECYLNKGDPLSSYKVACRMFDRNLIPDLNLCKKVSKILGSKGKSKEAERLLIR 546
           NTCH+LME YL KG PLS+YKVACRMF R+LIPDL LC+KV K L  +GKS+EA+ L +R
Sbjct: 607 NTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLR 666

Query: 545 FVERGLLS 522
           FVERG +S
Sbjct: 667 FVERGNIS 674


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