BLASTX nr result
ID: Cimicifuga21_contig00009722
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00009722
(1797 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 167 8e-39
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein... 154 1e-34
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 138 4e-30
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 137 9e-30
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 134 6e-29
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 167 bits (423), Expect = 8e-39
Identities = 145/446 (32%), Positives = 218/446 (48%), Gaps = 13/446 (2%)
Frame = +1
Query: 190 DRLTNLPESVLYHLLSFMDTKYVVQTSVLSTTWRYLWTLMPSLYFDWNYYCLHGNNRETE 369
D ++NLP+ +L H+LSF+ TK+ V TS+LS WRYLW +P L FD + E E
Sbjct: 10 DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69
Query: 370 ---IKFMNIVDQVLVTRPDSNVQKFRLVCGDFWDPLQICKWIEIAVARNIQELCLEITRE 540
I F N VD VL S ++KFRL D + + WI IA+ R +QEL L + +
Sbjct: 70 ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDN-NLDSVYSWICIALERRVQELDLHLLID 128
Query: 541 EFKIVELPPSLFTCESLEVMELKFVSYWPCLVLMLPGTISLPRLRTLHFGSVVFYDD--M 714
VELPP F C++L V++L L L +P T+ LP L+ LH SV + DD +
Sbjct: 129 --WRVELPPMFFICKTLVVVKLSC-----ALFLDIPTTVWLPSLKALHLKSVEYSDDDSI 181
Query: 715 NELFSSCPVLETLRLRLCTIAVEKNLNISALRLKDLVIENFV------MRCHLSEFKVKI 876
+L S CPVLE L + + +N+S LK L I F ++KV +
Sbjct: 182 QKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVV 241
Query: 877 HTPLLTSFRCKDFMVNDYVIENASSLENAEIDMAIDRGRDPEGFELYFEKKGKHGH-RVI 1053
P L D++ DY +++ SL A ID+ +D E FE G H +
Sbjct: 242 DAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVE----QDSEEFEESPHNGGISYHGPIY 297
Query: 1054 NTITKLSSVKALTLSSWSLQFLSEVLDALEHHATLFCNLRCLTVATFCSSSSYRALTYLV 1233
+ ++S+VK L+L+ +L LS + ++ F N+ L F ++ L +
Sbjct: 298 ELLGRISNVKCLSLTGVTLDSLSGTIG--DYKLPTFHNMTRLEF-LFIGGFNWDFLPNFL 354
Query: 1234 KSLPNIEILILHINKDGKTSITTKLTSKQHDEQWEKEL-LSNCTLYHLKFVEIWGFKRCK 1410
S PN+E L+ I T T++ E W L + C + HLK +EI
Sbjct: 355 HSSPNLEALV----------IETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGED 404
Query: 1411 IEVELLKFLLKNTVALEKLVINGHEA 1488
E+E +++LLKN L+++ I+ HE+
Sbjct: 405 YELEAVEYLLKNAEVLQQMTIDCHES 430
>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
vinifera]
Length = 610
Score = 154 bits (388), Expect = 1e-34
Identities = 140/475 (29%), Positives = 233/475 (49%), Gaps = 38/475 (8%)
Frame = +1
Query: 190 DRLTNLPESVLYHLLSFMDTKYVVQTSVLSTTWRYLWTLMPSLYFDWNYYCLHGNNRETE 369
D ++ L +S+L +LSF+ KYVV TS+LS W++LWT++P+L F + R +
Sbjct: 74 DGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVFRF---------RRRD 124
Query: 370 IKFMNIVDQVLVTRPDSNVQKFRLVCGDFWDPLQ----ICKWIEIAVARNIQELCLEITR 537
F+N +D+ LV +S ++KF + DF Q + WI A +N++EL L
Sbjct: 125 EHFVNSIDKTLVLHQNSQIKKFLI---DFTYQSQFQSSVNVWIRHATRKNVEELHL---- 177
Query: 538 EEFKIVE------------LPPSLFTCESLEVMELKFVSYWPCLVLMLPGTISLPRLRTL 681
+F++ + LP L+ S+ + L F + P V IS P L+TL
Sbjct: 178 -QFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSLWFCNIKPTWV------ISWPSLKTL 230
Query: 682 HFGSVVFYDDM-NELFSSCPVLETLRLRLCTIAVEKNLNISALRLKDLVIENFVMRCHLS 858
GSV DD+ E+ S CP LE+L L C +LNI++ LK LVI + H
Sbjct: 231 SIGSVELCDDLIEEILSGCPALESLELHHCFGI--NSLNITSASLKKLVINRYWDSSHSH 288
Query: 859 EFKV-KIHTPLLTSFRCKDFM-VNDYVIENASSLENAEI--DMAIDRGRDPEGFELYFEK 1026
V KI P + S M + ++N SL +A + ++A+ G + ++LY
Sbjct: 289 HRSVLKISAPNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAMQEGNPKDHYKLY--- 345
Query: 1027 KGKHGHRVINTITK-LSSVKALTLSSWSLQFLSEVLDALEHHATLFCNLRCLTVATFCSS 1203
H+V+ + K ++ VKALT+ +W +Q LS + + ++L NL+CL + T +
Sbjct: 346 -----HKVVMKLLKSVNHVKALTVGTWCIQVLS--IFEGKDLSSLLSNLKCLILDTHLNK 398
Query: 1204 SSYRALTYLVKSLPNIEILILHINKDGKTSIT-------TKLTSKQHDEQWEKE--LLSN 1356
+ L++S ++E ++++ I+ T L + ++ W +L+N
Sbjct: 399 WDLPGIANLLQSSTHLETFVINMISPCSQQISVEVGFSFTDLHNFDEEKYWSSREGVLAN 458
Query: 1357 CTLYHLKFVE----IWGFKRCKIEVELLKFLLKNTVALEKLVI---NGHEARSRY 1500
+L +LK V+ IW ++ L+KFLLKN LEK+ I ++RSR+
Sbjct: 459 -SLINLKTVKIIGVIWNQPGIELVFGLVKFLLKNARMLEKVEICAKRDSQSRSRW 512
>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
Full=F-box/LRR-repeat protein At4g14096
gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
thaliana] gi|22136112|gb|AAM91134.1| unknown protein
[Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
F-box/LRR-repeat protein [Arabidopsis thaliana]
Length = 468
Score = 138 bits (348), Expect = 4e-30
Identities = 131/441 (29%), Positives = 205/441 (46%), Gaps = 13/441 (2%)
Frame = +1
Query: 190 DRLTNLPESVLYHLLSFMDTKYVVQTSVLSTTWRYLWTLMPSLYFDWNYYCLHGNNRETE 369
D +++LPE++ H+LSF+ TK TSVLS WRYL+ +P+L D + Y N E
Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 67
Query: 370 IKFMNIVDQVLVTRPDSNVQKFRLVCGDFWDPLQICKWIEIAVARNIQELCLEITRE-EF 546
FM+ VD+VL + +S + KF L GD +P +I WI + R + +L L + E EF
Sbjct: 68 SSFMDFVDRVLALQGNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMETEF 127
Query: 547 KIVELPPSLFTCESLEVMELKFVSYWPCLVLMLPGTISLPRLRTLHFGSVVFYD---DMN 717
P +F ++L + LK + Y L+ + LP+L+TL+ S F +
Sbjct: 128 ---VFPSEMFLSKTL--VRLKLMLY----PLLEFEDVYLPKLKTLYIDSCYFEKYGIGLT 178
Query: 718 ELFSSCPVLETLRLRLCTIAVEKNLNISALRLKDLVIENFVMRCHLSEF--KVKIHTPLL 891
+L S CP+LE L L ++S LK L V EF V I TP L
Sbjct: 179 KLLSGCPILEDLVLDDIPWCTWDFASVSVPTLKRLTFSTQVR----DEFPKSVSIDTPNL 234
Query: 892 TSFRCKDFMVNDYVIENASSLENAEIDMAIDRGRDPEGFELYFEKKGKHGHRVINTITKL 1071
+ D + Y N SL A ID+ + +G G + + I ++
Sbjct: 235 VYLKFTDTVAGKYPKVNFDSLVEAHIDLRLLQGHQGYG-------ENDMVGNATDFIMRI 287
Query: 1072 SSVKALTLSSWSLQFLSEVLDALEHHATLFCNLRCLTVATFCSSSSYRALTYLVKSLPNI 1251
+VK L LSS +LQ L+ DA+ +F NL LT+ + +++L L+K+ PN+
Sbjct: 288 CNVKTLYLSSNTLQVLTYSCDAI----PIFNNLTHLTIES-NPEVGWQSLPGLLKNSPNL 342
Query: 1252 EILILHINKDGKTSITTKLTSKQHDE---QWEKELLSNCTLYHLKFVEIWGFKRCKIEV- 1419
E LI + K T K D + +E+ S +K ++I F ++
Sbjct: 343 ETLIFQ-------GLIHKATDKCGDVCLCKPREEIRSCLASSPVKVIKILKFGEISDDME 395
Query: 1420 ---ELLKFLLKNTVALEKLVI 1473
E +K+ L+ LEK+++
Sbjct: 396 KQREQIKYFLETMPNLEKMIL 416
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 137 bits (345), Expect = 9e-30
Identities = 128/453 (28%), Positives = 209/453 (46%), Gaps = 7/453 (1%)
Frame = +1
Query: 202 NLPESVLYHLLSFMDTKYVVQTSVLSTTWRYLWTLMPSLYFDWNYYCLHGNNRETEIKFM 381
NLP+++L H+LSF+ T+ V+TS+LS W +LW +L F + L R+ FM
Sbjct: 30 NLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF----FGLKSPKRKL---FM 82
Query: 382 NIVDQVLVTRPDSNVQKFRLVCGDFWDPLQICKWIEIAVARNIQELCLEITREEFKIVEL 561
+ VD+VL R SN+ +F L C DP ++ WI AV RN+++L LE+ E V L
Sbjct: 83 DFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEASFV-L 141
Query: 562 PPSLFTCESLEVMELKFVSYWPCLVLMLPGTISLPRLRTLHFGSVVFYDD--MNELFSSC 735
P LF CE+L +E+ +L LP +ISL L+ L+ V+F DD +LF S
Sbjct: 142 PHCLFNCETLTELEINMP-----YILKLPSSISLSCLKILNLYEVIFTDDHSTQQLF-SL 195
Query: 736 PVLETLRLRLCTIAVEKNLNISALRLKDLVIENFVMR--CHLSEFKVKIHTPLLTSFRCK 909
P L L + C ++ISA +L+ L I L V+I L F
Sbjct: 196 PNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADFTII 255
Query: 910 DFMVNDYVIENASSLENA-EIDMAIDRGRDPEGFELYFEKKGKHGHRVINTITKLSSVKA 1086
+ NDY + +S +E I A D+ R + +R + +SS ++
Sbjct: 256 GTLSNDYCLYESSVVETCISIFSAADKPR-------------QTAYRASKLLEGISSAQS 302
Query: 1087 LTLSSWSLQFLSEVLDALEHHATLFCNLRCLTVATFCSSSSYRALTYLVKSLPNIEILIL 1266
L L++ + L + + L F NL L + S+ +++ + P++ L
Sbjct: 303 LCLTTNVVDVLDDAPELLAFPLE-FRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQF 361
Query: 1267 HINKDGKTSITTKLTSKQHDEQWEKELLSNCTLYHLKFVEIWGFKRCKIEVELLKFLLKN 1446
+ ++ E W + C L LKF+++ F + E++ + FLLKN
Sbjct: 362 Y-------GVSMPKVPSNCREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKN 414
Query: 1447 TVALEK--LVINGHEARSRYIQKFKKVDD*LIS 1539
ALE ++ +G R + + K ++ L++
Sbjct: 415 ATALESMDIIYSGSARRDQGVDKTNEIHQQLLA 447
>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
[Arabidopsis thaliana]
Length = 443
Score = 134 bits (338), Expect = 6e-29
Identities = 117/386 (30%), Positives = 191/386 (49%), Gaps = 6/386 (1%)
Frame = +1
Query: 190 DRLTNLPESVLYHLLSFMDTKYVVQTSVLSTTWRYLWTLMPSLYFDWNYYCLHGNNRETE 369
D +++LP+ + H+LSF+ TK TSVLS WRYL+ +P+L D + Y N E
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67
Query: 370 IKFMNIVDQVLVTRPDSNVQKFRLVCGDFWDPLQICKWIEIAVARNIQELCLEITRE-EF 546
FM+ VD+VL + +S + KF L GD DP++I WI + R + +L L + E EF
Sbjct: 68 TSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESEF 127
Query: 547 KIVELPPSLFTCESLEVMELKFVSYWPCLVLMLPGTISLPRLRTLHFGSVVFYD---DMN 717
LP ++ C++L ++L+F Y P + + + LP+L+TL+ + F + +
Sbjct: 128 L---LPSQVYLCKTLVWLKLRFGLY-PTIDV---EDVHLPKLKTLYIEATHFEEHGVGLT 180
Query: 718 ELFSSCPVLETLRLRLCTIAVEKNLNISALRLKDLVIENFVMRCHLSEF--KVKIHTPLL 891
+L S CP+LE L L + + ++S LK L F + EF V + TP L
Sbjct: 181 KLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRL---RFSWQ-ERDEFPKSVLLDTPNL 236
Query: 892 TSFRCKDFMVNDYVIENASSLENAEIDMAIDRGRDPEGFELYFEKKGKHGHRVINTITKL 1071
+ D + Y N SL A ID+ + + + Y E + I ++
Sbjct: 237 VYLKFTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGE--NDMVGNATDFIMRI 294
Query: 1072 SSVKALTLSSWSLQFLSEVLDALEHHATLFCNLRCLTVATFCSSSSYRALTYLVKSLPNI 1251
+VK L LS+ +LQ L+ DA+ +F NL LT+ + ++++ L+K+ PN+
Sbjct: 295 CNVKTLYLSANTLQVLTYSCDAI----PIFNNLTHLTIES-NPRVGWQSVPGLLKNSPNL 349
Query: 1252 EILILHINKDGKTSITTKLTSKQHDE 1329
E LI + K K + KQ ++
Sbjct: 350 ETLIFQVIKILKFGENSDDMEKQREQ 375