BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009715
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lyc...   127   1e-27
gb|ACM45083.1| shikimate kinase [Vitis vinifera]                      119   5e-25
ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [...   119   5e-25
gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]            118   6e-25
ref|XP_002307130.1| shikimate kinase [Populus trichocarpa] gi|22...   117   1e-24

>ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
           gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate
           kinase, chloroplastic; Flags: Precursor
           gi|19349|emb|CAA45121.1| shikimate kinase precursor
           [Solanum lycopersicum]
          Length = 300

 Score =  127 bits (319), Expect = 1e-27
 Identities = 65/141 (46%), Positives = 92/141 (65%)
 Frame = +2

Query: 149 ATSSSSFHYCSWIGSEKIVAKPNGFLKFSQRCKEEGASLVALNWRELRWRGTARKPKFTD 328
           A  S S    SWI S+K+V KP+G L+FS++  E+    V ++   L+ R  A   +   
Sbjct: 3   ARVSQSLQLSSWINSDKVVRKPSGLLRFSEKWNEKPRHRVVVSCH-LQPRKAAHSDRRVQ 61

Query: 329 FQLSCSYKNVQAQSVDTETNYTSVDEALLLKRKSQDIAPYLSGRCIYLVGMMGSGKTTVG 508
            ++SCS +NVQA  +++     S+DE   LK K++++  YL GRC+YLVGMMG GKTTVG
Sbjct: 62  LKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVG 121

Query: 509 KILSEVQGYSFFDSDKLVEQA 571
           +IL+E  GYSFFD D+L+EQA
Sbjct: 122 RILAETLGYSFFDCDRLIEQA 142


>gb|ACM45083.1| shikimate kinase [Vitis vinifera]
          Length = 300

 Score =  119 bits (297), Expect = 5e-25
 Identities = 67/145 (46%), Positives = 92/145 (63%)
 Frame = +2

Query: 137 MEAVATSSSSFHYCSWIGSEKIVAKPNGFLKFSQRCKEEGASLVALNWRELRWRGTARKP 316
           MEA       F  C  I ++K   +P+  L FSQ+ +E+    ++ +++  R   T+   
Sbjct: 1   MEAKIALKMQFSAC--IDTDKFARRPSVSLPFSQKLREQHGHPISCHFQPRR---TSNWQ 55

Query: 317 KFTDFQLSCSYKNVQAQSVDTETNYTSVDEALLLKRKSQDIAPYLSGRCIYLVGMMGSGK 496
           K    + S SY+N  A  +++ +   S+DEAL+LK KSQ+I PY+ GRC+YLVGMMGSGK
Sbjct: 56  KHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGK 115

Query: 497 TTVGKILSEVQGYSFFDSDKLVEQA 571
           TT+GKILSEV GYSF DSD LVE A
Sbjct: 116 TTIGKILSEVLGYSFCDSDTLVELA 140


>ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
           gi|147772563|emb|CAN67344.1| hypothetical protein
           VITISV_038221 [Vitis vinifera]
           gi|296082504|emb|CBI21509.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  119 bits (297), Expect = 5e-25
 Identities = 67/145 (46%), Positives = 92/145 (63%)
 Frame = +2

Query: 137 MEAVATSSSSFHYCSWIGSEKIVAKPNGFLKFSQRCKEEGASLVALNWRELRWRGTARKP 316
           MEA       F  C  I ++K   +P+  L FSQ+ +E+    ++ +++  R   T+   
Sbjct: 1   MEAKIALKMQFSAC--IDTDKFARRPSVSLPFSQKLREQHGHPISCHFQPRR---TSNWQ 55

Query: 317 KFTDFQLSCSYKNVQAQSVDTETNYTSVDEALLLKRKSQDIAPYLSGRCIYLVGMMGSGK 496
           K    + S SY+N  A  +++ +   S+DEAL+LK KSQ+I PY+ GRC+YLVGMMGSGK
Sbjct: 56  KHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGK 115

Query: 497 TTVGKILSEVQGYSFFDSDKLVEQA 571
           TT+GKILSEV GYSF DSD LVE A
Sbjct: 116 TTIGKILSEVLGYSFCDSDTLVELA 140


>gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
          Length = 302

 Score =  118 bits (296), Expect = 6e-25
 Identities = 65/134 (48%), Positives = 86/134 (64%), Gaps = 6/134 (4%)
 Frame = +2

Query: 185 IGSEKIVAKPNGFLKFSQRCKEEGASLVALN------WRELRWRGTARKPKFTDFQLSCS 346
           IGSE+   +  G ++ S+R +E+    V ++       R   W  TA        ++SCS
Sbjct: 15  IGSERFARRTCGSVRVSRRFREQDRLPVLVSAQLQDKTRNSNWHKTA------SLEVSCS 68

Query: 347 YKNVQAQSVDTETNYTSVDEALLLKRKSQDIAPYLSGRCIYLVGMMGSGKTTVGKILSEV 526
           YKN  A  +++   +   D+AL+LK KSQ+I PYLSGRCIYLVGMMGSGKTTVGK+LS+V
Sbjct: 69  YKNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQV 128

Query: 527 QGYSFFDSDKLVEQ 568
             Y+FFDSD LVEQ
Sbjct: 129 LSYAFFDSDTLVEQ 142


>ref|XP_002307130.1| shikimate kinase [Populus trichocarpa] gi|222856579|gb|EEE94126.1|
           shikimate kinase [Populus trichocarpa]
          Length = 286

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/133 (48%), Positives = 89/133 (66%), Gaps = 3/133 (2%)
 Frame = +2

Query: 179 SWIGSEKIVAKPNGFLKFSQRCKEEGAS--LVALNWRELRWRGTARKPKFTDFQLSCSYK 352
           +WI +  +  KP GFL+FS R KE+      V+  +R +R      + +   F++S SY 
Sbjct: 14  TWIDTGNLARKPTGFLRFSGRLKEQKRLQVFVSAQFRPVR---DENRHRLASFEVSRSYN 70

Query: 353 NVQAQSVDTETNYTSVD-EALLLKRKSQDIAPYLSGRCIYLVGMMGSGKTTVGKILSEVQ 529
           N +  ++++E+    +D EAL+LK KSQ+I PYL+GRCIYLVGMMGSGKTTVGKILS+  
Sbjct: 71  NSRVSTLESESLQDLLDDEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSQAI 130

Query: 530 GYSFFDSDKLVEQ 568
            YSF DSD LVE+
Sbjct: 131 HYSFCDSDTLVEK 143