BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009708
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   303   1e-79
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   303   1e-79
ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   301   4e-79
ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...   288   3e-75
gb|ACT21194.1| zinc finger protein [Carica papaya]                    283   8e-74

>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
            vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
            ubiquitin-protein ligase RING1 isoform 2 [Vitis vinifera]
          Length = 369

 Score =  303 bits (775), Expect = 1e-79
 Identities = 173/347 (49%), Positives = 201/347 (57%), Gaps = 16/347 (4%)
 Frame = -1

Query: 1402 QLYFCYECNRTVSITPSPSSDLVCPNCNGGFLEEYETXXXXXXXXXXXXXPFLAFSSDAP 1223
            Q YFCY+CN TVSITPSP+SD +CP+CN GFLEE E               FL FS    
Sbjct: 23   QSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNPIPVPIPNP-FLGFSDLPS 81

Query: 1222 HGFSGI------PLMFXXXXXXXXXXXXXXXXIDPFGDLDLDSIFGVRRSASGVPQPPDA 1061
               +G       PL+F                 D    +D   +FG           PDA
Sbjct: 82   LSAAGATATAFPPLVFSTAAGGSI---------DLQNSVDFPGLFGA---------DPDA 123

Query: 1060 FNPISFLQNYLSS-----ANIQLVIDDNPMDXXXXXXXXXXXXXXXXLPANLGDYVIGSG 896
            F+P +FLQNYL +      N+Q VID N  +                   NLGDY IG G
Sbjct: 124  FHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSP------------NLGDYFIGPG 171

Query: 895  LEQIIQQLAENDPNRYGTPPASKSAVEGLPEIKISKEMLESDNSQCAVCKDEFELGAEAK 716
            LEQ+IQQLAENDPNRYGTPPASKSA+EGLP I+I+ E+L +D+SQCAVCKD FEL  EAK
Sbjct: 172  LEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAK 231

Query: 715  QMPCKHIYHPDCILPWLELHNSCPVCRYELPTDDPDYENPSEG---TQTQGSASRSPFTV 545
            QMPCKHIYH DCILPWLELHNSCPVCRYELPTDDPDYE+ + G    QT G+A+      
Sbjct: 232  QMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAAAG 291

Query: 544  ALXXXXXXXXXXXXATQD--NSPSPRTADRRFRISFPWPFRGSAAPA 410
            A              + +  N  +PRTADR FRISFPWPFR   +PA
Sbjct: 292  AASNSASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSPA 338


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  303 bits (775), Expect = 1e-79
 Identities = 173/347 (49%), Positives = 201/347 (57%), Gaps = 16/347 (4%)
 Frame = -1

Query: 1402 QLYFCYECNRTVSITPSPSSDLVCPNCNGGFLEEYETXXXXXXXXXXXXXPFLAFSSDAP 1223
            Q YFCY+CN TVSITPSP+SD +CP+CN GFLEE E               FL FS    
Sbjct: 25   QSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNPIPVPIPNP-FLGFSDLPS 83

Query: 1222 HGFSGI------PLMFXXXXXXXXXXXXXXXXIDPFGDLDLDSIFGVRRSASGVPQPPDA 1061
               +G       PL+F                 D    +D   +FG           PDA
Sbjct: 84   LSAAGATATAFPPLVFSTAAGGSI---------DLQNSVDFPGLFGA---------DPDA 125

Query: 1060 FNPISFLQNYLSS-----ANIQLVIDDNPMDXXXXXXXXXXXXXXXXLPANLGDYVIGSG 896
            F+P +FLQNYL +      N+Q VID N  +                   NLGDY IG G
Sbjct: 126  FHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSP------------NLGDYFIGPG 173

Query: 895  LEQIIQQLAENDPNRYGTPPASKSAVEGLPEIKISKEMLESDNSQCAVCKDEFELGAEAK 716
            LEQ+IQQLAENDPNRYGTPPASKSA+EGLP I+I+ E+L +D+SQCAVCKD FEL  EAK
Sbjct: 174  LEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAK 233

Query: 715  QMPCKHIYHPDCILPWLELHNSCPVCRYELPTDDPDYENPSEG---TQTQGSASRSPFTV 545
            QMPCKHIYH DCILPWLELHNSCPVCRYELPTDDPDYE+ + G    QT G+A+      
Sbjct: 234  QMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAAAG 293

Query: 544  ALXXXXXXXXXXXXATQD--NSPSPRTADRRFRISFPWPFRGSAAPA 410
            A              + +  N  +PRTADR FRISFPWPFR   +PA
Sbjct: 294  AASNSASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSPA 340


>ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
            sativus] gi|449439503|ref|XP_004137525.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
            sativus] gi|449439505|ref|XP_004137526.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
            sativus] gi|449503086|ref|XP_004161827.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
            sativus] gi|449503089|ref|XP_004161828.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
            sativus] gi|449503091|ref|XP_004161829.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
            sativus]
          Length = 378

 Score =  301 bits (770), Expect = 4e-79
 Identities = 169/341 (49%), Positives = 206/341 (60%), Gaps = 10/341 (2%)
 Frame = -1

Query: 1402 QLYFCYECNRTVSITPSPSSDLVCPNCNGGFLEEYETXXXXXXXXXXXXXPFLAFSSDAP 1223
            QLYFCY CNRTV+ITPS SSDL+CPNCN  F+EE E+              FL+F+S+A 
Sbjct: 22   QLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPSPVSNP---FLSFTSEAF 78

Query: 1222 HGFS-------GIPLMFXXXXXXXXXXXXXXXXIDPFGDLDLDSIFGVRRSASGVPQPPD 1064
              FS       G P++F                 D    L   S+    RS+S + Q PD
Sbjct: 79   PPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSL----RSSSSL-QNPD 133

Query: 1063 AFNPISFLQNYLSSANIQLVIDDNPMDXXXXXXXXXXXXXXXXLPANLGDYVIGSGLEQI 884
             FNP+ FLQNYL SAN+QLVI +   +                   NLGDY  G GLEQ+
Sbjct: 134  GFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNF-----------NLGDYFFGPGLEQL 182

Query: 883  IQQLAENDPNRYGTPPASKSAVEGLPEIKISKEMLESDNSQCAVCKDEFELGAEAKQMPC 704
            IQQLAENDPNRYGTPPASKSA+EGLP+IKI++E+L +D+SQCAVCKD FEL   AK MPC
Sbjct: 183  IQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMPC 242

Query: 703  KHIYHPDCILPWLELHNSCPVCRYELPTDDPDYENPSEGTQ--TQGSASRSPFTVALXXX 530
            KHIYH DCI+PWLELHNSCPVCRYELPTDDPDYE  + G+    +  +   PF  +    
Sbjct: 243  KHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDS-STG 301

Query: 529  XXXXXXXXXATQDNSPSPRTADRRF-RISFPWPFRGSAAPA 410
                      + +NS + +  +RR  RI+FPWPFRG  + A
Sbjct: 302  GENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAA 342


>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  288 bits (736), Expect = 3e-75
 Identities = 167/329 (50%), Positives = 193/329 (58%), Gaps = 5/329 (1%)
 Frame = -1

Query: 1402 QLYFCYECNRTVSITPSPSSDLVCPNCNGGFLEEYETXXXXXXXXXXXXXPFLAFSSDAP 1223
            QLYFCY+C+RTV+ITPSP+SDL CPNC  GFLEE E+             P +     A 
Sbjct: 11   QLYFCYQCDRTVTITPSPTSDLSCPNCQEGFLEECESPNPSSNPVDSGLGPAILLDEFAS 70

Query: 1222 HGFSGIPLMFXXXXXXXXXXXXXXXXIDPFGDLDLDSIFGVRRSASGVPQPPDAFNPISF 1043
              F G+                      P      +S      SAS + Q PD FNP +F
Sbjct: 71   I-FGGMA---------------------PTPRSSNNSTTTNSSSASPLFQDPDGFNPFAF 108

Query: 1042 LQNYLSS-----ANIQLVIDDNPMDXXXXXXXXXXXXXXXXLPANLGDYVIGSGLEQIIQ 878
            LQNYL +     ANIQ VI++N                   LPANLGDY IG GLEQ+IQ
Sbjct: 109  LQNYLQTMRAGGANIQFVIENNS-------GMGGMDTTGFRLPANLGDYFIGPGLEQLIQ 161

Query: 877  QLAENDPNRYGTPPASKSAVEGLPEIKISKEMLESDNSQCAVCKDEFELGAEAKQMPCKH 698
            QLAENDPNRYGTPPASKSAVE LP+IK++KE+LESD+SQCAVCKD FELG EAKQ+PCKH
Sbjct: 162  QLAENDPNRYGTPPASKSAVENLPDIKVTKELLESDSSQCAVCKDSFELGEEAKQIPCKH 221

Query: 697  IYHPDCILPWLELHNSCPVCRYELPTDDPDYENPSEGTQTQGSASRSPFTVALXXXXXXX 518
            IYH DCI PWLELHNSCPVCRYELPTDDPDYE      Q +G+                 
Sbjct: 222  IYHKDCITPWLELHNSCPVCRYELPTDDPDYE------QRKGNG---------------- 259

Query: 517  XXXXXATQDNSPSPRTADRRFRISFPWPF 431
                    ++  +PR  DRRFRI+F WPF
Sbjct: 260  --------NDVVTPR--DRRFRIAFQWPF 278


>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score =  283 bits (724), Expect = 8e-74
 Identities = 165/338 (48%), Positives = 190/338 (56%), Gaps = 11/338 (3%)
 Frame = -1

Query: 1402 QLYFCYECNRTVSITPSP--SSDLVCPNCNGGFLEEYETXXXXXXXXXXXXXPFLAFSSD 1229
            Q YFCY+CNRTV I+PSP  SSDL+CP CNGGFLEE E                     D
Sbjct: 6    QPYFCYQCNRTVRISPSPCPSSDLLCPTCNGGFLEELENPNPNQQTLNLNPF-------D 58

Query: 1228 APHGFSGIPLMFXXXXXXXXXXXXXXXXIDPFGDLDLDSIFGVR---RSASGVPQPPDAF 1058
            +P  F   P                     PF DL   + FG      SA+  P   + F
Sbjct: 59   SPFPFLSSP-----------------NSPHPFDDLS--AFFGGMVPPPSATARPNDTEVF 99

Query: 1057 NPISFLQNYLSS-----ANIQLVIDDNPMDXXXXXXXXXXXXXXXXLPANLGDYVIGSGL 893
            NP  FLQNYL +     ANIQ VI++N                      NLGDY +G GL
Sbjct: 100  NPFLFLQNYLQTLRANGANIQFVIENNS-----PGGSGPSGAFRLPGSLNLGDYFLGPGL 154

Query: 892  EQIIQQLAENDPNRYGTPPASKSAVEGLPEIKISKEMLESDNSQCAVCKDEFELGAEAKQ 713
            EQ+IQQLAENDPNR+GTPPASKSA+E LP IKI +EM +SD+SQCAVCKD F L  EAKQ
Sbjct: 155  EQLIQQLAENDPNRHGTPPASKSAIEALPTIKIFQEMPDSDSSQCAVCKDSFALAEEAKQ 214

Query: 712  MPCKHIYHPDCILPWLELHNSCPVCRYELPTDDPDYENPSEGTQTQG-SASRSPFTVALX 536
            MPCKHIYH  CILPWLELHNSCPVCRYELPTDD DYE+ +   +T   + S S   V   
Sbjct: 215  MPCKHIYHSQCILPWLELHNSCPVCRYELPTDDADYEHRTRANRTPAQNVSGSTDAV--- 271

Query: 535  XXXXXXXXXXXATQDNSPSPRTADRRFRISFPWPFRGS 422
                         +DN  +PR+ +RRFRI  PWPFR S
Sbjct: 272  ---NAVADGNAGNRDNPETPRSVERRFRIFLPWPFRSS 306