BLASTX nr result

ID: Cimicifuga21_contig00009674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009674
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514275.1| cak1, putative [Ricinus communis] gi|2235467...   317   2e-84
ref|XP_002284217.1| PREDICTED: cyclin-dependent kinase F-1 [Viti...   314   2e-83
emb|CBI28045.3| unnamed protein product [Vitis vinifera]              313   4e-83
ref|XP_002325003.1| predicted protein [Populus trichocarpa] gi|2...   306   3e-81
ref|XP_002333979.1| predicted protein [Populus trichocarpa] gi|2...   305   8e-81

>ref|XP_002514275.1| cak1, putative [Ricinus communis] gi|223546731|gb|EEF48229.1| cak1,
           putative [Ricinus communis]
          Length = 467

 Score =  317 bits (812), Expect = 2e-84
 Identities = 157/229 (68%), Positives = 185/229 (80%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3   SCLATCTTSDIGGDDPLKSSYSYDIDGNNEDGIGALTSCVGTRWFKAPELLYGSTDYGME 182
           SC AT T SDIG DD LKSSY+YD+D   +D   +LTSCVGTRWF+APELLYGSTDYG+E
Sbjct: 243 SCFATGTASDIG-DDFLKSSYTYDVDEGGDDRHASLTSCVGTRWFRAPELLYGSTDYGLE 301

Query: 183 VDLWSLGCIFAELLKLEPLFPGTSDIDQLSRIINVLGNLTEENWPGCSSLPDYGKIFFEK 362
           VDLWSLGCIFAELL LEPLFPGTSDIDQL+RII+VLGNLTE+ WPGC  LPDYG I F K
Sbjct: 302 VDLWSLGCIFAELLTLEPLFPGTSDIDQLNRIISVLGNLTEQVWPGCLKLPDYGIISFAK 361

Query: 363 IERPLGIEGCLPNYS-NEICLVQKLVCYNPASRATPMELLNDGYFHKEPLPVALNELRLP 539
           +E P+G+E CLP  S +EI LV+KLVCY PASRAT MELL+D YF KEPLPV ++EL +P
Sbjct: 362 VENPIGVEACLPGRSLDEISLVKKLVCYEPASRATAMELLHDEYFSKEPLPVPVSELYVP 421

Query: 540 FTNSEQDDRSSGEWFDYNNMGSDSDREEFGGSGSFNVSSTGTGFSIRFS 686
             NS QD+ S G W+DYN+ GSDSD +EF   G  +V++T +GF+I+FS
Sbjct: 422 LINSGQDEDSPGGWYDYNDRGSDSDFDEF---GPMSVTTTSSGFAIQFS 467


>ref|XP_002284217.1| PREDICTED: cyclin-dependent kinase F-1 [Vitis vinifera]
          Length = 471

 Score =  314 bits (804), Expect = 2e-83
 Identities = 153/228 (67%), Positives = 182/228 (79%), Gaps = 1/228 (0%)
 Frame = +3

Query: 3   SCLATCTTSDIGGDDPLKSSYSYDIDGNNEDGIGALTSCVGTRWFKAPELLYGSTDYGME 182
           SCLATCTTSDI  DDP K SY Y+ +   +D  G LTSCVGTRWFKAPELLYGST+YG E
Sbjct: 246 SCLATCTTSDIEEDDPFKGSYYYEAEEGGDDTSGKLTSCVGTRWFKAPELLYGSTNYGPE 305

Query: 183 VDLWSLGCIFAELLKLEPLFPGTSDIDQLSRIINVLGNLTEENWPGCSSLPDYGKIFFEK 362
           +DLWSLGCIFAEL  LEPLFPG+SDIDQLSRI +VLGNLTEEN PGCS  PDYG I F K
Sbjct: 306 IDLWSLGCIFAELFSLEPLFPGSSDIDQLSRIFSVLGNLTEENSPGCSKYPDYGIISFNK 365

Query: 363 IERPLGIEGCLPNYS-NEICLVQKLVCYNPASRATPMELLNDGYFHKEPLPVALNELRLP 539
           +E P+G+E CLPN+S +E+ LV+KL+C++PASRAT MELL+D Y ++EPLPV ++ELR+P
Sbjct: 366 VENPVGLEACLPNHSPDELLLVKKLICFDPASRATAMELLHDKYLNEEPLPVPVSELRVP 425

Query: 540 FTNSEQDDRSSGEWFDYNNMGSDSDREEFGGSGSFNVSSTGTGFSIRF 683
            TN  QD+ S GE  DY +M SDSD EEF    +FNV++T  GFSI+F
Sbjct: 426 STNHAQDEGSPGECCDYKDMDSDSDFEEF---STFNVTTTNAGFSIQF 470


>emb|CBI28045.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  313 bits (801), Expect = 4e-83
 Identities = 152/228 (66%), Positives = 182/228 (79%), Gaps = 1/228 (0%)
 Frame = +3

Query: 3   SCLATCTTSDIGGDDPLKSSYSYDIDGNNEDGIGALTSCVGTRWFKAPELLYGSTDYGME 182
           SCLATCTTSDI  DDP K SY Y+ +   +D  G LTSCVGTRWFKAPELLYGST+YG E
Sbjct: 144 SCLATCTTSDIEEDDPFKGSYYYEAEEGGDDTSGKLTSCVGTRWFKAPELLYGSTNYGPE 203

Query: 183 VDLWSLGCIFAELLKLEPLFPGTSDIDQLSRIINVLGNLTEENWPGCSSLPDYGKIFFEK 362
           +DLWSLGCIFAEL  LEPLFPG+SDIDQLSRI +VLGNLTEEN PGCS  PDYG I F K
Sbjct: 204 IDLWSLGCIFAELFSLEPLFPGSSDIDQLSRIFSVLGNLTEENSPGCSKYPDYGIISFNK 263

Query: 363 IERPLGIEGCLPNYS-NEICLVQKLVCYNPASRATPMELLNDGYFHKEPLPVALNELRLP 539
           +E P+G+E CLPN+S +E+ LV+KL+C++PASRAT MELL+D Y ++EPLPV ++ELR+P
Sbjct: 264 VENPVGLEACLPNHSPDELLLVKKLICFDPASRATAMELLHDKYLNEEPLPVPVSELRVP 323

Query: 540 FTNSEQDDRSSGEWFDYNNMGSDSDREEFGGSGSFNVSSTGTGFSIRF 683
            TN  QD+ S GE  DY +M SDSD EEF    +FNV++T  GFSI++
Sbjct: 324 STNHAQDEGSPGECCDYKDMDSDSDFEEF---STFNVTTTNAGFSIQY 368


>ref|XP_002325003.1| predicted protein [Populus trichocarpa] gi|222866437|gb|EEF03568.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  306 bits (785), Expect = 3e-81
 Identities = 154/229 (67%), Positives = 179/229 (78%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3   SCLATCTTSDIGGDDPLKSSYSYDIDGNNEDGIGALTSCVGTRWFKAPELLYGSTDYGME 182
           SC AT T SD+G DD LKS  SY+ +    DG G+LTSCVGTRWF+APELLYGSTDYG+E
Sbjct: 254 SCFATGTASDLG-DDMLKSYCSYEAEDAENDGCGSLTSCVGTRWFRAPELLYGSTDYGLE 312

Query: 183 VDLWSLGCIFAELLKLEPLFPGTSDIDQLSRIINVLGNLTEENWPGCSSLPDYGKIFFEK 362
           VDLWSLGCIFAELL L+PLFPGTSDIDQ+SRI +VLGNLTEE WPGC  LPDYG I F K
Sbjct: 313 VDLWSLGCIFAELLTLKPLFPGTSDIDQISRIFSVLGNLTEEVWPGCVKLPDYGTISFAK 372

Query: 363 IERPLGIEGCLPNYS-NEICLVQKLVCYNPASRATPMELLNDGYFHKEPLPVALNELRLP 539
           +E P GIE CLPN+S  EI LV+KLVCY+PASRAT MELL+D YF KEPLPV  ++L +P
Sbjct: 373 VENPTGIEACLPNHSPGEISLVKKLVCYDPASRATAMELLHDEYFSKEPLPVPFSDLWVP 432

Query: 540 FTNSEQDDRSSGEWFDYNNMGSDSDREEFGGSGSFNVSSTGTGFSIRFS 686
            T+S QD+ S G W DYN+  SDSD ++F   G  +V +T  GFSI+FS
Sbjct: 433 STSSGQDEDSPGLWHDYNDRESDSDFDDF---GPMSVKTTSDGFSIQFS 478


>ref|XP_002333979.1| predicted protein [Populus trichocarpa] gi|222839415|gb|EEE77752.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  305 bits (781), Expect = 8e-81
 Identities = 153/228 (67%), Positives = 178/228 (78%), Gaps = 1/228 (0%)
 Frame = +3

Query: 3   SCLATCTTSDIGGDDPLKSSYSYDIDGNNEDGIGALTSCVGTRWFKAPELLYGSTDYGME 182
           SC AT T SD+G DD LKS  SY+ +    DG G+LTSCVGTRWF+APELLYGSTDYG+E
Sbjct: 91  SCFATGTASDLG-DDMLKSYCSYEAEDAENDGCGSLTSCVGTRWFRAPELLYGSTDYGLE 149

Query: 183 VDLWSLGCIFAELLKLEPLFPGTSDIDQLSRIINVLGNLTEENWPGCSSLPDYGKIFFEK 362
           VDLWSLGCIFAELL L+PLFPGTSDIDQ+SRI +VLGNLTEE WPGC  LPDYG I F K
Sbjct: 150 VDLWSLGCIFAELLTLKPLFPGTSDIDQISRIFSVLGNLTEEVWPGCVKLPDYGTISFAK 209

Query: 363 IERPLGIEGCLPNYS-NEICLVQKLVCYNPASRATPMELLNDGYFHKEPLPVALNELRLP 539
           +E P GIE CLPN+S  EI LV+KLVCY+PASRAT MELL+D YF KEPLPV  ++L +P
Sbjct: 210 VENPTGIEACLPNHSPGEISLVKKLVCYDPASRATAMELLHDEYFSKEPLPVPFSDLWVP 269

Query: 540 FTNSEQDDRSSGEWFDYNNMGSDSDREEFGGSGSFNVSSTGTGFSIRF 683
            T+S QD+ S G W DYN+  SDSD ++F   G  +V +T  GFSI+F
Sbjct: 270 STSSGQDEDSPGLWHDYNDRESDSDFDDF---GPMSVKTTSDGFSIQF 314


Top