BLASTX nr result

ID: Cimicifuga21_contig00009638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009638
         (1346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271751.1| PREDICTED: protein YIPF6 [Vitis vinifera]         394   e-107
ref|XP_004143629.1| PREDICTED: protein YIPF6-like [Cucumis sativ...   390   e-106
ref|XP_002325060.1| predicted protein [Populus trichocarpa] gi|1...   387   e-105
ref|XP_002329629.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
emb|CAB52470.1| putative protein [Arabidopsis thaliana] gi|72699...   380   e-103

>ref|XP_002271751.1| PREDICTED: protein YIPF6 [Vitis vinifera]
          Length = 282

 Score =  394 bits (1011), Expect = e-107
 Identities = 206/284 (72%), Positives = 220/284 (77%)
 Frame = -2

Query: 1123 MSHNDTVPLHPSSQSDIDEIENLIIESVQSGPSTVLPARPKSPPRAXXXXXXXXXXXXXX 944
            MSH+DT+PLHPSSQSDIDEIENLI  SVQSGP+TVLPARP SPPRA              
Sbjct: 1    MSHSDTIPLHPSSQSDIDEIENLINASVQSGPATVLPARPPSPPRASIPVSSTPFIQSNI 60

Query: 943  PKPNYQQKXXXXXXXXXXXXXXXXXXXXXXXXXSQGNIGATGFGSPPNTLTEPVWDTVKR 764
            P P Y +                           + +IGA+GFGS  NTLTEPVWDTVKR
Sbjct: 61   PPPTYNKPPVVPAVVPAAVPPPLPNTSNSSST--RPSIGASGFGSQANTLTEPVWDTVKR 118

Query: 763  DLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEXXXXX 584
            DLSRIVSNLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSE     
Sbjct: 119  DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVA 178

Query: 583  XXXXXAGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGAIICMVKGNVIIKMVVVCV 404
                 AGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGA+ICM+K NVI+K++VVCV
Sbjct: 179  FALLAAGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGALICMLKDNVIVKVIVVCV 238

Query: 403  ALAWSSWAAYPFMSSAVSPGRKALALYPVFLMYVSVGFLIIAID 272
             LAWSSWAAYPFMSSAV+P RKALALYPV LMYVSVGFLIIAID
Sbjct: 239  TLAWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 282


>ref|XP_004143629.1| PREDICTED: protein YIPF6-like [Cucumis sativus]
            gi|449520002|ref|XP_004167023.1| PREDICTED: protein
            YIPF6-like [Cucumis sativus]
          Length = 278

 Score =  390 bits (1003), Expect = e-106
 Identities = 204/288 (70%), Positives = 219/288 (76%), Gaps = 4/288 (1%)
 Frame = -2

Query: 1123 MSHNDTVPLHPSSQSDIDEIENLIIESVQSGPSTVLPARPKSPPRAXXXXXXXXXXXXXX 944
            MSH+DT+PLH SSQSDIDEIENLI  SVQ+GPSTVLPARP SPPRA              
Sbjct: 1    MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSP------ 54

Query: 943  PKPNYQQKXXXXXXXXXXXXXXXXXXXXXXXXXSQGN----IGATGFGSPPNTLTEPVWD 776
                + Q                            GN    + A+GFGSPPNTLTEPVWD
Sbjct: 55   ----FLQSNLPPLPPKSTIQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWD 110

Query: 775  TVKRDLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEX 596
            TVKRDLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSE 
Sbjct: 111  TVKRDLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEV 170

Query: 595  XXXXXXXXXAGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGAIICMVKGNVIIKMV 416
                     AGA+ILTLNVLLLGGHIIFFQS+SLLGYCLFPLD+GA+ICM+K NV++K+V
Sbjct: 171  FAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIV 230

Query: 415  VVCVALAWSSWAAYPFMSSAVSPGRKALALYPVFLMYVSVGFLIIAID 272
            VVCV LAWSSWAAYPFMSSAV+P RKALALYPVFLMYVSVGFLIIAID
Sbjct: 231  VVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278


>ref|XP_002325060.1| predicted protein [Populus trichocarpa] gi|118484354|gb|ABK94054.1|
            unknown [Populus trichocarpa] gi|222866494|gb|EEF03625.1|
            predicted protein [Populus trichocarpa]
          Length = 283

 Score =  387 bits (993), Expect = e-105
 Identities = 204/285 (71%), Positives = 217/285 (76%), Gaps = 1/285 (0%)
 Frame = -2

Query: 1123 MSHN-DTVPLHPSSQSDIDEIENLIIESVQSGPSTVLPARPKSPPRAXXXXXXXXXXXXX 947
            MSHN DT+PLH SSQSDIDEIENLI  S+QS PSTVLPARP SPPR              
Sbjct: 1    MSHNSDTIPLHASSQSDIDEIENLINSSIQSSPSTVLPARPPSPPRIPVSASPFIQSNLP 60

Query: 946  XPKPNYQQKXXXXXXXXXXXXXXXXXXXXXXXXXSQGNIGATGFGSPPNTLTEPVWDTVK 767
             P+P  Q                             GN  A GFGSPPNTLTEPVWDTVK
Sbjct: 61   PPQPKPQPTIQKPPSIFPSAPLPPLPPSSGNSAG--GNFSAAGFGSPPNTLTEPVWDTVK 118

Query: 766  RDLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEXXXX 587
            RDLSRIVSNLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSE    
Sbjct: 119  RDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAV 178

Query: 586  XXXXXXAGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGAIICMVKGNVIIKMVVVC 407
                  AGA+ILTLNVLLLGGHIIFFQS+SLLGYCLFPLDVGA++CM+K NVIIK++VV 
Sbjct: 179  AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALVCMLKDNVIIKVIVVS 238

Query: 406  VALAWSSWAAYPFMSSAVSPGRKALALYPVFLMYVSVGFLIIAID 272
            VALAWSSWAAYPFMSSAV+P RKAL+LYPVFLMYVSVGFLIIAID
Sbjct: 239  VALAWSSWAAYPFMSSAVNPRRKALSLYPVFLMYVSVGFLIIAID 283


>ref|XP_002329629.1| predicted protein [Populus trichocarpa] gi|222870510|gb|EEF07641.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  380 bits (976), Expect = e-103
 Identities = 203/285 (71%), Positives = 215/285 (75%), Gaps = 1/285 (0%)
 Frame = -2

Query: 1123 MSHN-DTVPLHPSSQSDIDEIENLIIESVQSGPSTVLPARPKSPPRAXXXXXXXXXXXXX 947
            MSHN DT+PLH SSQSDIDEIENLI  S+QS PSTVLPARP SPPR              
Sbjct: 1    MSHNSDTIPLHASSQSDIDEIENLINSSIQSSPSTVLPARPPSPPRIPVSSSPFIQSNLP 60

Query: 946  XPKPNYQQKXXXXXXXXXXXXXXXXXXXXXXXXXSQGNIGATGFGSPPNTLTEPVWDTVK 767
             P P   Q                          + GNI ATGFGS PNTLTEPVWDT+K
Sbjct: 61   PP-PAQAQLPTLQKPPSAVPSAPLPPLPPSTGNSAGGNIAATGFGSLPNTLTEPVWDTIK 119

Query: 766  RDLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEXXXX 587
            RDLSRIVSNLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSE    
Sbjct: 120  RDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAV 179

Query: 586  XXXXXXAGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGAIICMVKGNVIIKMVVVC 407
                  AGA+ILTLNVLLLGGHIIFFQS+SLLGYCL PLD+GA ICM+K NVIIK++VV 
Sbjct: 180  AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLVPLDIGAFICMLKDNVIIKVIVVF 239

Query: 406  VALAWSSWAAYPFMSSAVSPGRKALALYPVFLMYVSVGFLIIAID 272
            V LAWSSWAAYPFMSSAV+P RKALALYPVFLMYVSVGFLIIAID
Sbjct: 240  VTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 284


>emb|CAB52470.1| putative protein [Arabidopsis thaliana] gi|7269926|emb|CAB81019.1|
            putative protein [Arabidopsis thaliana]
          Length = 355

 Score =  380 bits (976), Expect = e-103
 Identities = 202/290 (69%), Positives = 217/290 (74%), Gaps = 5/290 (1%)
 Frame = -2

Query: 1126 KMSHNDTVPLHPSSQSDIDEIENLIIESVQSGPSTVLPARPKSPPRAXXXXXXXXXXXXX 947
            KMSHNDT+PL+ SSQSDIDEIEN++ +S QSGP TVLPARP SP R              
Sbjct: 75   KMSHNDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVSS------- 127

Query: 946  XPKPNYQQKXXXXXXXXXXXXXXXXXXXXXXXXXSQGN-----IGATGFGSPPNTLTEPV 782
               P  Q                           S GN     IG +GFGSPPNTLTEPV
Sbjct: 128  --SPFVQSNLPPLPPSSSSSTQKVMPVPAPPPLPSAGNEGNKSIGGSGFGSPPNTLTEPV 185

Query: 781  WDTVKRDLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 602
            WDTVKRDLSRIVSNLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS
Sbjct: 186  WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 245

Query: 601  EXXXXXXXXXXAGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGAIICMVKGNVIIK 422
            E          AGA+ILTLNVLLLGGHIIFFQS+SLLGYCLFPLDVGA+ICM+K NVI+K
Sbjct: 246  EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILK 305

Query: 421  MVVVCVALAWSSWAAYPFMSSAVSPGRKALALYPVFLMYVSVGFLIIAID 272
            MVVV V LAWSSWAAYPFMS+AV+P RKALALYPVFLMYVSVGFLIIAI+
Sbjct: 306  MVVVSVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 355


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