BLASTX nr result

ID: Cimicifuga21_contig00009632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009632
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332117.1| cc-nbs-lrr resistance protein [Populus trich...   115   4e-24
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...   114   1e-23
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...   113   2e-23
ref|XP_003632842.1| PREDICTED: putative disease resistance prote...   112   2e-23
ref|XP_002268266.2| PREDICTED: putative disease resistance prote...   110   9e-23

>ref|XP_002332117.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222874937|gb|EEF12068.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 938

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/148 (41%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
 Frame = -1

Query: 437 TLTSQSQLRVDDAAGSRNKVLSYLLSPCSCFTHVSVRYDIGHRIKGISERLDVIAAMKEQ 258
           T  ++SQ++V++      + +  ++  C CF  V +R DI H+IK ++ER+D I   K++
Sbjct: 85  TAIAKSQMKVNEHPRKTARKVCSMIFSCLCFREVGLRRDIAHKIKELNERIDGIVIEKDR 144

Query: 257 YGLKVIQ---KQEEPRQQTSSLVDVLEIRGRDHDKDVIMSWLLSESSHQDLRVCVISIVG 87
           +  K  +   KQ E  Q+T+S++D  E++GR++DKD + + LLSESS Q   +  IS+VG
Sbjct: 145 FHFKSSEVGIKQLE-HQKTTSVIDAAEVKGRENDKDRVKNMLLSESS-QGPALRTISLVG 202

Query: 86  MGGFGKTTLAKLLFNEEKVVTAFEKRMW 3
           MGG GKTTLAKL++N+  V T F+KR+W
Sbjct: 203 MGGIGKTTLAKLVYNDHDVTTHFDKRIW 230


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score =  114 bits (284), Expect = 1e-23
 Identities = 66/143 (46%), Positives = 92/143 (64%), Gaps = 4/143 (2%)
 Frame = -1

Query: 419 QLRVDDAAGSRNKV-LSYLLSPCSCFTHVSVRYDIGHRIKGISERLDVIAAMKEQYGLKV 243
           ++R D +  S+  V  S  LSP  CF    V +D+G ++KGI ERLD+IA  KE+Y   +
Sbjct: 94  RIRKDKSLFSKKMVCFSPYLSPLFCFNQTVVHHDMGIKMKGIKERLDLIAIEKERYHFSL 153

Query: 242 IQKQEEP-RQQTSSLVDVLEIRGRDHDKDVIMSWLLSESSHQ--DLRVCVISIVGMGGFG 72
             + EEP R +T+ L+DV E+RGR+ DKD ++S L  +S  +       V+SIVGMGG G
Sbjct: 154 EGRSEEPERLETTPLIDVSEVRGRELDKDTLISKLCDDSLEEISPNGPGVVSIVGMGGMG 213

Query: 71  KTTLAKLLFNEEKVVTAFEKRMW 3
           KTTLA+L FN+E V T FE ++W
Sbjct: 214 KTTLAQLAFNDETVNTHFEHKIW 236


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 987

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/138 (42%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
 Frame = -1

Query: 413 RVDDAAGSRNKVLSYLLSPCSCFTHVSVRYDIGHRIKGISERLDVIAAMKEQYGLKVIQK 234
           + ++A   ++ V S+L S C  F  V+ R+DI H+I  + ++L+ IA  K  +G ++ + 
Sbjct: 121 QAENALAPKSVVSSFLCSFCCSFRRVARRHDIAHKIIEVGQKLEDIAKRKAMFGFELHKA 180

Query: 233 -QEEPRQQTSSLVDVLEIRGRDHDKDVIMSWLLSESSHQDLRVCVISIVGMGGFGKTTLA 57
            ++EP +QT+S VDV  + GR+ +K  ++S LL +SS +  +V VISIVGMGG GKTTLA
Sbjct: 181 IEKEPDRQTTSFVDVSRVHGREDEKKNVISKLLCDSSQEGRKVQVISIVGMGGLGKTTLA 240

Query: 56  KLLFNEEKVVTAFEKRMW 3
           +L +N +++ T FEKR+W
Sbjct: 241 QLAYNADEIKTYFEKRIW 258


>ref|XP_003632842.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1006

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = -1

Query: 419 QLRVDDAAGSRNKVLSYLLSPCSCFTHVSVRYDIGHRIKGISERLDVIAAMKEQYGLKVI 240
           Q+  ++    + K+ S L SPC CF  V +R DIG +IK I ++LD IA  + Q+     
Sbjct: 87  QIGAENPCIPKLKISSCLPSPCVCFKQVLLRCDIGIKIKDIRKQLDAIANERNQFNFVSS 146

Query: 239 QKQEEP-RQQTSSLVDVLEIRGRDHDKDVIMSWLLSESSHQDLRVCVISIVGMGGFGKTT 63
              ++P R+ TSS++DV +  GRD D DVI+  LL  SS +   + +ISIVGMGG GKTT
Sbjct: 147 STIQQPHRRMTSSVIDVSQFCGRDADMDVIIDKLLGGSSQESSSLYIISIVGMGGIGKTT 206

Query: 62  LAKLLFNEEKVVTAFEKRMW 3
           LA+L +N+++V   F +RMW
Sbjct: 207 LAQLAYNDDRVKAYFHERMW 226


>ref|XP_002268266.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 932

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/135 (42%), Positives = 87/135 (64%)
 Frame = -1

Query: 407 DDAAGSRNKVLSYLLSPCSCFTHVSVRYDIGHRIKGISERLDVIAAMKEQYGLKVIQKQE 228
           ++A+ S+NKV S + SPC CF  V+ R DI  +IK + ++LDVIA+ + ++       QE
Sbjct: 96  ENASMSKNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQLDVIASERTRFNFISSGTQE 155

Query: 227 EPRQQTSSLVDVLEIRGRDHDKDVIMSWLLSESSHQDLRVCVISIVGMGGFGKTTLAKLL 48
             R  T+S +DV E+ GRD D + I+  LL E+  +  R+ +I+IVG GG GKTTLA+L 
Sbjct: 156 PQRLITTSAIDVSEVYGRDTDVNAILGRLLGENDEEKSRLYIIAIVGTGGMGKTTLAQLA 215

Query: 47  FNEEKVVTAFEKRMW 3
           +N  +V   F++R+W
Sbjct: 216 YNHPEVKAHFDERIW 230


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