BLASTX nr result
ID: Cimicifuga21_contig00009605
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00009605
(1892 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320388.1| predicted protein [Populus trichocarpa] gi|2... 642 0.0
ref|XP_002524809.1| elongation factor tu, putative [Ricinus comm... 638 0.0
ref|XP_002302831.1| predicted protein [Populus trichocarpa] gi|2... 635 0.0
ref|NP_192202.1| Elongation factor Tu [Arabidopsis thaliana] gi|... 634 0.0
ref|XP_002872804.1| hypothetical protein ARALYDRAFT_490266 [Arab... 632 0.0
>ref|XP_002320388.1| predicted protein [Populus trichocarpa] gi|222861161|gb|EEE98703.1|
predicted protein [Populus trichocarpa]
Length = 450
Score = 642 bits (1655), Expect(2) = 0.0
Identities = 316/385 (82%), Positives = 350/385 (90%), Gaps = 1/385 (0%)
Frame = +1
Query: 214 MASLVLRSPSSKRLASFSS-IHSCCRAAISSNLSISESIYGNERVSDAGSWWRSMATFTR 390
MAS+VLR+P+SKRL FSS IH CCR + S++ SISES+ + + + WWRSMATFTR
Sbjct: 1 MASVVLRNPNSKRLLPFSSQIHCCCRGSASTHSSISESLSSSNDRTSSSPWWRSMATFTR 60
Query: 391 TKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFAEIDKAPEEKKRGITIATAHV 570
KPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKA+AF EIDKAPEEKKRGITIATAHV
Sbjct: 61 NKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
Query: 571 EYETNKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMPQTKEHILLARQVGV 750
EYET KRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSA DGPMPQTKEHILLARQVGV
Sbjct: 121 EYETTKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTKEHILLARQVGV 180
Query: 751 PSLVCFLNKVDAVTDTELLEIVEMELRELLTFYKFPGEEIPIIRGSALKALEGTDEEIGK 930
PSLVCFLNKVD V+D EL+E+VEME+RELL FYKFPG+EIPI++GSAL AL+GT+EEIGK
Sbjct: 181 PSLVCFLNKVDVVSDPELIELVEMEVRELLNFYKFPGDEIPIVQGSALSALQGTNEEIGK 240
Query: 931 KAILELMDAVDSYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDIEIL 1110
AIL+LMDAVD YIPDPVRQLDKPFLMPIEDVFSIQGRGTV TGR+EQGTIK GE++EIL
Sbjct: 241 NAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEIL 300
Query: 1111 GLMQGGPLKSTVTGVEMFKKILDHGQAGDNVGLLLRGLKRDDVQRGQVVAKPGSLKAYKR 1290
GL + GP K+TVTGVEMFKK+LD GQAGDNVGLLLRGLKR+DVQRGQV+AKPG++K KR
Sbjct: 301 GLSKDGPKKTTVTGVEMFKKLLDQGQAGDNVGLLLRGLKREDVQRGQVIAKPGTVKTSKR 360
Query: 1291 FEAEIYVLTKEEGGRHTAFFSNYMP 1365
FEAEIY LTK+EGGRHTAFFSNY P
Sbjct: 361 FEAEIYSLTKDEGGRHTAFFSNYRP 385
Score = 114 bits (285), Expect(2) = 0.0
Identities = 57/63 (90%), Positives = 59/63 (93%)
Frame = +3
Query: 1428 FYLRTADITGKVELPENVKMVMPGDNVTAVFELMSSVPLAAGQRFALREGGRTVGAGVVS 1607
FYLRTADITGKVELPENVKMVMPGDNVTAVFEL+ VPL GQRFALREGGRTVGAGVVS
Sbjct: 387 FYLRTADITGKVELPENVKMVMPGDNVTAVFELILPVPLETGQRFALREGGRTVGAGVVS 446
Query: 1608 KVI 1616
KV+
Sbjct: 447 KVL 449
>ref|XP_002524809.1| elongation factor tu, putative [Ricinus communis]
gi|223535993|gb|EEF37652.1| elongation factor tu,
putative [Ricinus communis]
Length = 449
Score = 638 bits (1646), Expect(2) = 0.0
Identities = 321/385 (83%), Positives = 348/385 (90%), Gaps = 1/385 (0%)
Frame = +1
Query: 214 MASLVLRSPSSKRLASFSS-IHSCCRAAISSNLSISESIYGNERVSDAGSWWRSMATFTR 390
MA+ LR+P+SKRL FSS I+ CR ++ S S+ N+ + WWRSMATFTR
Sbjct: 1 MAAAALRNPNSKRLLPFSSQIYWSCRGGSAACASTHFSLSSNDSFNH-NPWWRSMATFTR 59
Query: 391 TKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFAEIDKAPEEKKRGITIATAHV 570
TKPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKAVAF EIDKAPEEKKRGITIATAHV
Sbjct: 60 TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKKRGITIATAHV 119
Query: 571 EYETNKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMPQTKEHILLARQVGV 750
EYET KRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSA DGPMPQTKEHILLARQVGV
Sbjct: 120 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGV 179
Query: 751 PSLVCFLNKVDAVTDTELLEIVEMELRELLTFYKFPGEEIPIIRGSALKALEGTDEEIGK 930
PSLVCFLNK DAV D ELLE+VEMELRELL+FYKFPG+EIPIIRGSAL AL+GT+EE+GK
Sbjct: 180 PSLVCFLNKCDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTNEELGK 239
Query: 931 KAILELMDAVDSYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDIEIL 1110
KAIL+LMDAVD YIPDPVRQLDKPFLMPIEDVFSIQGRGTV TGR+EQGTIK GE++EIL
Sbjct: 240 KAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEIL 299
Query: 1111 GLMQGGPLKSTVTGVEMFKKILDHGQAGDNVGLLLRGLKRDDVQRGQVVAKPGSLKAYKR 1290
GLMQG PLK+TVTGVEMFKKILD GQAGDNVGLLLRGLKR+DVQRGQV+AKPGS+K YK+
Sbjct: 300 GLMQGAPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDVQRGQVIAKPGSVKTYKK 359
Query: 1291 FEAEIYVLTKEEGGRHTAFFSNYMP 1365
FEAEIYVLTK+EGGRHTAFFSNY P
Sbjct: 360 FEAEIYVLTKDEGGRHTAFFSNYRP 384
Score = 115 bits (289), Expect(2) = 0.0
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +3
Query: 1428 FYLRTADITGKVELPENVKMVMPGDNVTAVFELMSSVPLAAGQRFALREGGRTVGAGVVS 1607
FY+RTADITGKVELPENVKMVMPGDNVTA FEL+ VPL AGQRFALREGGRTVGAGVVS
Sbjct: 386 FYMRTADITGKVELPENVKMVMPGDNVTATFELILPVPLEAGQRFALREGGRTVGAGVVS 445
Query: 1608 KVIS 1619
KVIS
Sbjct: 446 KVIS 449
>ref|XP_002302831.1| predicted protein [Populus trichocarpa] gi|222844557|gb|EEE82104.1|
predicted protein [Populus trichocarpa]
Length = 447
Score = 635 bits (1638), Expect(2) = 0.0
Identities = 314/385 (81%), Positives = 350/385 (90%), Gaps = 1/385 (0%)
Frame = +1
Query: 214 MASLVLRSPSSKRLASFSS-IHSCCRAAISSNLSISESIYGNERVSDAGSWWRSMATFTR 390
MASL LR+P+SKRL FSS + CCR + SS ++ES+ + + + WWRSMATFTR
Sbjct: 1 MASLALRNPNSKRLLPFSSQFYCCCRGSPSS---LTESLLSSNDRTSSSPWWRSMATFTR 57
Query: 391 TKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFAEIDKAPEEKKRGITIATAHV 570
TKPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKA+AF EIDKAPEEKKRGITIATAHV
Sbjct: 58 TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 117
Query: 571 EYETNKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMPQTKEHILLARQVGV 750
EYET KRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSA DGPMPQTKEHILLARQVGV
Sbjct: 118 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTKEHILLARQVGV 177
Query: 751 PSLVCFLNKVDAVTDTELLEIVEMELRELLTFYKFPGEEIPIIRGSALKALEGTDEEIGK 930
PSLVCFLNKVD V+D EL+E+VEME+RELL+FYKFPG+EIPI+RGSAL AL+GT+EEIGK
Sbjct: 178 PSLVCFLNKVDVVSDPELIELVEMEVRELLSFYKFPGDEIPIVRGSALSALQGTNEEIGK 237
Query: 931 KAILELMDAVDSYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDIEIL 1110
KAIL+LMDAVD YIPDPVRQL+KPFLMPIEDVFSIQGRGTV TGR+EQGTIK GE++EIL
Sbjct: 238 KAILKLMDAVDEYIPDPVRQLEKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEIL 297
Query: 1111 GLMQGGPLKSTVTGVEMFKKILDHGQAGDNVGLLLRGLKRDDVQRGQVVAKPGSLKAYKR 1290
GL + GP ++TVTGVEMFKK+LD GQAGDNVGLLLRGLKR+DVQRGQV+AKPG++K YKR
Sbjct: 298 GLSKEGPKRTTVTGVEMFKKLLDQGQAGDNVGLLLRGLKREDVQRGQVIAKPGTVKTYKR 357
Query: 1291 FEAEIYVLTKEEGGRHTAFFSNYMP 1365
FEAEIY LTK+EGGRHTAFFSNY P
Sbjct: 358 FEAEIYSLTKDEGGRHTAFFSNYRP 382
Score = 113 bits (283), Expect(2) = 0.0
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +3
Query: 1428 FYLRTADITGKVELPENVKMVMPGDNVTAVFELMSSVPLAAGQRFALREGGRTVGAGVVS 1607
FYLRTADITGKVELPENVKMVMPGDNVTA+FEL+ VPL GQRFALREGGRTVGAGVVS
Sbjct: 384 FYLRTADITGKVELPENVKMVMPGDNVTAIFELILPVPLEKGQRFALREGGRTVGAGVVS 443
Query: 1608 KVI 1616
KV+
Sbjct: 444 KVL 446
>ref|NP_192202.1| Elongation factor Tu [Arabidopsis thaliana]
gi|25090254|sp|Q9ZT91.1|EFTM_ARATH RecName:
Full=Elongation factor Tu, mitochondrial; Flags:
Precursor gi|3924612|gb|AAC79113.1| mitochondrial
elongation factor Tu [Arabidopsis thaliana]
gi|4263511|gb|AAD15337.1| mitochondrial elongation factor
Tu [Arabidopsis thaliana] gi|7269778|emb|CAB77778.1|
mitochondrial elongation factor Tu [Arabidopsis thaliana]
gi|22531166|gb|AAM97087.1| mitochondrial elongation
factor Tu [Arabidopsis thaliana]
gi|31376381|gb|AAP49517.1| At4g02930 [Arabidopsis
thaliana] gi|110742332|dbj|BAE99090.1| mitochondrial
elongation factor Tu [Arabidopsis thaliana]
gi|332656852|gb|AEE82252.1| Elongation factor Tu
[Arabidopsis thaliana]
Length = 454
Score = 634 bits (1634), Expect(2) = 0.0
Identities = 321/389 (82%), Positives = 353/389 (90%), Gaps = 5/389 (1%)
Frame = +1
Query: 214 MASLVLRSPSSKRLASFSS-IHSCCRAAISSNLSISESIYGNERVSDA---GSWWRSMAT 381
MAS+VLR+PSSKRL FSS I+S C A+++S+ SIS SI G++ S S+WRSMAT
Sbjct: 1 MASVVLRNPSSKRLVPFSSQIYSRCGASVTSSYSISHSIGGDDLSSSTFGTSSFWRSMAT 60
Query: 382 FTRTKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFAEIDKAPEEKKRGITIAT 561
FTR KPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKA+AF EIDKAPEEKKRGITIAT
Sbjct: 61 FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120
Query: 562 AHVEYETNKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMPQTKEHILLARQ 741
AHVEYET KRHYAHVDCPGHADYVKNMITGAAQMDGGILVVS DGPMPQTKEHILLARQ
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQ 180
Query: 742 VGVPSLVCFLNKVDAVTDTELLEIVEMELRELLTFYKFPGEEIPIIRGSALKALEGTDEE 921
VGVPSLVCFLNKVD V D ELLE+VEMELRELL+FYKFPG++IPIIRGSAL AL+GT++E
Sbjct: 181 VGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDE 240
Query: 922 IGKKAILELMDAVDSYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDI 1101
IG++AIL+LMDAVD YIPDPVR LDKPFLMPIEDVFSIQGRGTV TGRIEQG IK GE++
Sbjct: 241 IGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEV 300
Query: 1102 EILGLMQGG-PLKSTVTGVEMFKKILDHGQAGDNVGLLLRGLKRDDVQRGQVVAKPGSLK 1278
EILGL +GG PLKSTVTGVEMFKKILD+GQAGDNVGLLLRGLKR+D+QRG V+AKPGS K
Sbjct: 301 EILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVIAKPGSCK 360
Query: 1279 AYKRFEAEIYVLTKEEGGRHTAFFSNYMP 1365
YK+FEAEIYVLTK+EGGRHTAFFSNY P
Sbjct: 361 TYKKFEAEIYVLTKDEGGRHTAFFSNYRP 389
Score = 114 bits (286), Expect(2) = 0.0
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = +3
Query: 1428 FYLRTADITGKVELPENVKMVMPGDNVTAVFELMSSVPLAAGQRFALREGGRTVGAGVVS 1607
FYLRTADITGKVELPENVKMVMPGDNVTAVFEL+ VPL GQRFALREGGRTVGAGVVS
Sbjct: 391 FYLRTADITGKVELPENVKMVMPGDNVTAVFELIMPVPLETGQRFALREGGRTVGAGVVS 450
Query: 1608 KVIS 1619
KV++
Sbjct: 451 KVMT 454
>ref|XP_002872804.1| hypothetical protein ARALYDRAFT_490266 [Arabidopsis lyrata subsp.
lyrata] gi|297318641|gb|EFH49063.1| hypothetical protein
ARALYDRAFT_490266 [Arabidopsis lyrata subsp. lyrata]
Length = 454
Score = 632 bits (1629), Expect(2) = 0.0
Identities = 322/389 (82%), Positives = 352/389 (90%), Gaps = 5/389 (1%)
Frame = +1
Query: 214 MASLVLRSPSSKRLASFSS-IHSCCRAAISSNLSISESIYGNERVSDA---GSWWRSMAT 381
MAS+VLR+PSSKRL FSS I+S C A+I+S+ SIS SI G++ S S WRSMAT
Sbjct: 1 MASVVLRNPSSKRLVPFSSQIYSRCGASITSSYSISHSIGGDDLSSSTLGTSSLWRSMAT 60
Query: 382 FTRTKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFAEIDKAPEEKKRGITIAT 561
FTR KPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKA+AF EIDKAPEEKKRGITIAT
Sbjct: 61 FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120
Query: 562 AHVEYETNKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMPQTKEHILLARQ 741
AHVEYET KRHYAHVDCPGHADYVKNMITGAAQMDGGILVVS DGPMPQTKEHILLARQ
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQ 180
Query: 742 VGVPSLVCFLNKVDAVTDTELLEIVEMELRELLTFYKFPGEEIPIIRGSALKALEGTDEE 921
VGVPSLVCFLNKVD V D ELLE+VEMELRELL+FYKFPG++IPIIRGSAL AL+GT++E
Sbjct: 181 VGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDE 240
Query: 922 IGKKAILELMDAVDSYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDI 1101
IG++AIL+LMDAVD YIPDPVR LDK FLMPIEDVFSIQGRGTV TGRIEQGTIK GE++
Sbjct: 241 IGRQAILKLMDAVDEYIPDPVRVLDKAFLMPIEDVFSIQGRGTVATGRIEQGTIKVGEEV 300
Query: 1102 EILGLMQGG-PLKSTVTGVEMFKKILDHGQAGDNVGLLLRGLKRDDVQRGQVVAKPGSLK 1278
EILGL +GG PLKSTVTGVEMFKKILD+GQAGDNVGLLLRGLKR+D+QRG V+AKPGS K
Sbjct: 301 EILGLREGGLPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVIAKPGSCK 360
Query: 1279 AYKRFEAEIYVLTKEEGGRHTAFFSNYMP 1365
YK+FEAEIYVLTK+EGGRHTAFFSNY P
Sbjct: 361 TYKKFEAEIYVLTKDEGGRHTAFFSNYRP 389
Score = 115 bits (289), Expect(2) = 0.0
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +3
Query: 1428 FYLRTADITGKVELPENVKMVMPGDNVTAVFELMSSVPLAAGQRFALREGGRTVGAGVVS 1607
FYLRTADITGKVELPENVKMVMPGDNVTAVFEL+ VPL GQRFALREGGRTVGAGVVS
Sbjct: 391 FYLRTADITGKVELPENVKMVMPGDNVTAVFELIMPVPLETGQRFALREGGRTVGAGVVS 450
Query: 1608 KVIS 1619
KV+S
Sbjct: 451 KVMS 454