BLASTX nr result

ID: Cimicifuga21_contig00009570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009570
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana] gi|33...   254   2e-65
ref|XP_002304731.1| predicted protein [Populus trichocarpa] gi|2...   253   3e-65
gb|AFS50006.1| SNARE-like protein [Dendrobium officinale]             252   6e-65
gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]                 252   6e-65
ref|XP_002332053.1| predicted protein [Populus trichocarpa] gi|2...   251   1e-64

>ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana]
           gi|332198292|gb|AEE36413.1| SNARE-like protein
           [Arabidopsis thaliana]
          Length = 135

 Score =  254 bits (648), Expect = 2e-65
 Identities = 126/135 (93%), Positives = 131/135 (97%)
 Frame = +3

Query: 108 MASTACFIIVSRNDIPIYEAEVGSALKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 287
           MA+TACFIIV RNDIPIYEAEVGSA K+E+AA  HQFILHAALD+VQDLAWTTSAMFLK+
Sbjct: 1   MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 288 VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 467
           VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 468 SHFDTKVRALARKYL 512
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135


>ref|XP_002304731.1| predicted protein [Populus trichocarpa] gi|222842163|gb|EEE79710.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  253 bits (645), Expect = 3e-65
 Identities = 124/135 (91%), Positives = 131/135 (97%)
 Frame = +3

Query: 108 MASTACFIIVSRNDIPIYEAEVGSALKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 287
           MA+TACFIIVSRNDIPIYEAEVGSA K+E+AA  HQFILHAALDIVQDLAWTTSAM+LKA
Sbjct: 1   MATTACFIIVSRNDIPIYEAEVGSATKREDAAQMHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 288 VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 467
           +DRFND+VVSVYVTAGHTR MLLHDSRN+DGIKSFFQEVHELYIKILLNPLYLPGSRITS
Sbjct: 61  IDRFNDMVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 468 SHFDTKVRALARKYL 512
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135


>gb|AFS50006.1| SNARE-like protein [Dendrobium officinale]
          Length = 135

 Score =  252 bits (643), Expect = 6e-65
 Identities = 125/135 (92%), Positives = 131/135 (97%)
 Frame = +3

Query: 108 MASTACFIIVSRNDIPIYEAEVGSALKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 287
           MASTACFIIV +NDIPIYEAE+GSA+KKEE AHQHQFILHAALDIVQDLAWTTSAMFLKA
Sbjct: 1   MASTACFIIVIKNDIPIYEAELGSAVKKEETAHQHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 288 VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 467
           +DRFN+LVVSVYVTAGHTRLMLLHDSRNED IKSFFQEVHELY+KILLNPLYLPGSRITS
Sbjct: 61  MDRFNELVVSVYVTAGHTRLMLLHDSRNEDAIKSFFQEVHELYLKILLNPLYLPGSRITS 120

Query: 468 SHFDTKVRALARKYL 512
           SH DTKVRALARKYL
Sbjct: 121 SHSDTKVRALARKYL 135


>gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]
          Length = 135

 Score =  252 bits (643), Expect = 6e-65
 Identities = 124/135 (91%), Positives = 132/135 (97%)
 Frame = +3

Query: 108 MASTACFIIVSRNDIPIYEAEVGSALKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 287
           MA+TACF+IV+RNDIPIYEAEVGSA K+E+AA  HQFILHAALD+VQDLAWTTSAMFLK+
Sbjct: 1   MANTACFMIVARNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 288 VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 467
           VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 468 SHFDTKVRALARKYL 512
           +HFDTKVRALARKYL
Sbjct: 121 THFDTKVRALARKYL 135


>ref|XP_002332053.1| predicted protein [Populus trichocarpa] gi|222831939|gb|EEE70416.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  251 bits (641), Expect = 1e-64
 Identities = 124/135 (91%), Positives = 131/135 (97%)
 Frame = +3

Query: 108 MASTACFIIVSRNDIPIYEAEVGSALKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 287
           MA+TACFIIVSR+DIPIYEAEVGSA K+E+AA  HQFILHAALDIVQDLAWTTSAM+LKA
Sbjct: 1   MATTACFIIVSRDDIPIYEAEVGSATKREDAAQMHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 288 VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 467
           +DRFNDLVVSVYVTAGHTRLMLLHDSRN+DGIKSFFQEVHELYIKILLNPLYLPGSRI S
Sbjct: 61  IDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRIAS 120

Query: 468 SHFDTKVRALARKYL 512
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135


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