BLASTX nr result

ID: Cimicifuga21_contig00009541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009541
         (1389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268743.1| PREDICTED: uncharacterized protein LOC100252...   467   e-129
ref|XP_002529496.1| Rhomboid protein, putative [Ricinus communis...   457   e-126
ref|XP_003541163.1| PREDICTED: rhomboid protein 2-like [Glycine ...   450   e-124
ref|XP_003537932.1| PREDICTED: rhomboid protein 2-like [Glycine ...   449   e-123
gb|ACU17711.1| unknown [Glycine max]                                  448   e-123

>ref|XP_002268743.1| PREDICTED: uncharacterized protein LOC100252469 [Vitis vinifera]
            gi|147779771|emb|CAN67998.1| hypothetical protein
            VITISV_001298 [Vitis vinifera]
            gi|297743810|emb|CBI36693.3| unnamed protein product
            [Vitis vinifera]
          Length = 271

 Score =  467 bits (1201), Expect = e-129
 Identities = 224/271 (82%), Positives = 247/271 (91%)
 Frame = +2

Query: 293  MGKPLLFEILEKPATSCLIGICSAIWYYIQKKNIGYANVGLSYETAIEGHHWRIITSAFS 472
            MGKPL +EILEKPATSC+IG+C AIW+YIQKKNIGY++VGLSYETAIEGHHWRIITSA S
Sbjct: 1    MGKPLFYEILEKPATSCIIGLCCAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSALS 60

Query: 473  HISVIHLVFNMSALWSLGVVEKLGHMGLGIQYYLHYTIXXXXXXXXXXXXIYHVLIQKFK 652
            HISVIHLVFNMSALWSLGVVE+LGHMG+G+++YL YT+             YHVLIQ+FK
Sbjct: 61   HISVIHLVFNMSALWSLGVVEQLGHMGMGVEFYLQYTLVLVVLSGGLVLGSYHVLIQRFK 120

Query: 653  LEYFRRVTAVGYSCVVFGWMTILAVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 832
            LEYFRRVTAVGYSCVVFGWMTIL+VKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121  LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 833  SFIGHFSGIIVGYSIAWGLIHGMNNYWAFSILGWIVFVFVFSLKRSGAYDFNFIEIEPVT 1012
            SF+GH SGIIVGY+IAWG+IHGM NYWA S+LGWIV VFVFSLKRSGAYDF+F+EIEPVT
Sbjct: 181  SFLGHLSGIIVGYAIAWGVIHGMTNYWAVSMLGWIVLVFVFSLKRSGAYDFSFLEIEPVT 240

Query: 1013 DSSLPSVGFLAAGNGRTLQMSALQLGGADLV 1105
            D SLPSV FLA+GNGRTLQMSAL +GG+DLV
Sbjct: 241  DPSLPSVRFLASGNGRTLQMSALPVGGSDLV 271


>ref|XP_002529496.1| Rhomboid protein, putative [Ricinus communis]
            gi|223531054|gb|EEF32906.1| Rhomboid protein, putative
            [Ricinus communis]
          Length = 269

 Score =  457 bits (1176), Expect = e-126
 Identities = 221/271 (81%), Positives = 246/271 (90%)
 Frame = +2

Query: 293  MGKPLLFEILEKPATSCLIGICSAIWYYIQKKNIGYANVGLSYETAIEGHHWRIITSAFS 472
            MGKPL +EILEKPATSC+IGICSAIW+YIQKKNIGY++VGLSYETAIEGHHWRIITSAFS
Sbjct: 1    MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHHWRIITSAFS 60

Query: 473  HISVIHLVFNMSALWSLGVVEKLGHMGLGIQYYLHYTIXXXXXXXXXXXXIYHVLIQKFK 652
            HISV+HLVFNMSALWSLGVVE+LGHMGLGI YYLHYT+            +Y +LIQ+FK
Sbjct: 61   HISVLHLVFNMSALWSLGVVEQLGHMGLGIAYYLHYTLVLVVLSGVLVLGMYRILIQRFK 120

Query: 653  LEYFRRVTAVGYSCVVFGWMTILAVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 832
            ++YFRRVTAVGYSCVVFGWMTIL+VKQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121  VDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 833  SFIGHFSGIIVGYSIAWGLIHGMNNYWAFSILGWIVFVFVFSLKRSGAYDFNFIEIEPVT 1012
            SF+GH SGIIVGYSIAWGLIHGMNN+WA S+LGWIV +F+FSLKRSGAYDF+F+EIE VT
Sbjct: 181  SFLGHLSGIIVGYSIAWGLIHGMNNFWAISMLGWIVVIFMFSLKRSGAYDFSFLEIESVT 240

Query: 1013 DSSLPSVGFLAAGNGRTLQMSALQLGGADLV 1105
            D+SLPSV FL  GNGRTLQMSAL L G ++V
Sbjct: 241  DASLPSVRFL--GNGRTLQMSALPLEGVEVV 269


>ref|XP_003541163.1| PREDICTED: rhomboid protein 2-like [Glycine max]
          Length = 271

 Score =  450 bits (1158), Expect = e-124
 Identities = 215/271 (79%), Positives = 241/271 (88%)
 Frame = +2

Query: 293  MGKPLLFEILEKPATSCLIGICSAIWYYIQKKNIGYANVGLSYETAIEGHHWRIITSAFS 472
            MGKPL +EILEKPATSC+IGICS IW+YIQKKNIGY++VGLSYETA+EGHHWRIITSAFS
Sbjct: 1    MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFS 60

Query: 473  HISVIHLVFNMSALWSLGVVEKLGHMGLGIQYYLHYTIXXXXXXXXXXXXIYHVLIQKFK 652
            HISVIHLVFNMSALWSLGVVE+LGH+GLG++YYL YT+            +YH+LIQ+FK
Sbjct: 61   HISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFK 120

Query: 653  LEYFRRVTAVGYSCVVFGWMTILAVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 832
            LEYFRRVTAVGYSCVVFGWMTIL+VKQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121  LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 833  SFIGHFSGIIVGYSIAWGLIHGMNNYWAFSILGWIVFVFVFSLKRSGAYDFNFIEIEPVT 1012
            SF+GH SGI+VGY+IAWGLIHGM+NYWA S+LGWI  VFV SLKRSGA D NF+EIE VT
Sbjct: 181  SFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVT 240

Query: 1013 DSSLPSVGFLAAGNGRTLQMSALQLGGADLV 1105
            D SLPSV FLA+ +GRTLQMSAL  G  ++V
Sbjct: 241  DPSLPSVRFLASNSGRTLQMSALPNGNVEIV 271


>ref|XP_003537932.1| PREDICTED: rhomboid protein 2-like [Glycine max]
          Length = 271

 Score =  449 bits (1154), Expect = e-123
 Identities = 214/271 (78%), Positives = 241/271 (88%)
 Frame = +2

Query: 293  MGKPLLFEILEKPATSCLIGICSAIWYYIQKKNIGYANVGLSYETAIEGHHWRIITSAFS 472
            MGKPL +EILEKPATSC+IGICS IW+YIQKKNIGY++VGLSYETA+EGHHWRIITSAFS
Sbjct: 1    MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 473  HISVIHLVFNMSALWSLGVVEKLGHMGLGIQYYLHYTIXXXXXXXXXXXXIYHVLIQKFK 652
            HISVIHLVFNMSALWSLGVVE+LGH+GLG++YYL YT+            +YH+LI++FK
Sbjct: 61   HISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIERFK 120

Query: 653  LEYFRRVTAVGYSCVVFGWMTILAVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 832
            LEYFRRVTAVGYSCVVFGWMTIL+VKQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121  LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 833  SFIGHFSGIIVGYSIAWGLIHGMNNYWAFSILGWIVFVFVFSLKRSGAYDFNFIEIEPVT 1012
            SF+GH SGI+VGY+IAWGLIHGM+NYWA S+LGWI  VFV SLKRSGA D NF+EIE VT
Sbjct: 181  SFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVT 240

Query: 1013 DSSLPSVGFLAAGNGRTLQMSALQLGGADLV 1105
            D SLPSV FLA+ +GRTLQMSAL  G  ++V
Sbjct: 241  DPSLPSVRFLASNSGRTLQMSALPNGNVEIV 271


>gb|ACU17711.1| unknown [Glycine max]
          Length = 271

 Score =  448 bits (1153), Expect = e-123
 Identities = 213/271 (78%), Positives = 241/271 (88%)
 Frame = +2

Query: 293  MGKPLLFEILEKPATSCLIGICSAIWYYIQKKNIGYANVGLSYETAIEGHHWRIITSAFS 472
            MGKPL +EILEKPATSC+IGICS IW+YIQKKNIGY++VGLSYETA+EGHHWRIITSAFS
Sbjct: 1    MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFS 60

Query: 473  HISVIHLVFNMSALWSLGVVEKLGHMGLGIQYYLHYTIXXXXXXXXXXXXIYHVLIQKFK 652
            HISVIHLVFNMSALWSLGVVE+LGH+GLG++YYL YT+            +YH+LI++FK
Sbjct: 61   HISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIERFK 120

Query: 653  LEYFRRVTAVGYSCVVFGWMTILAVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQA 832
            LEYFRRVTAVGYSCVVFGWMTIL+VKQPSSKL+LFGFLSLPISFAPFESLIFTSIIVPQA
Sbjct: 121  LEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQA 180

Query: 833  SFIGHFSGIIVGYSIAWGLIHGMNNYWAFSILGWIVFVFVFSLKRSGAYDFNFIEIEPVT 1012
            SF+GH SGI+VGY+IAWGLIHGM+NYWA S+LGWI  VF+ SLKRSGA D NF+EIE VT
Sbjct: 181  SFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFILSLKRSGAVDLNFLEIESVT 240

Query: 1013 DSSLPSVGFLAAGNGRTLQMSALQLGGADLV 1105
            D SLPSV FLA+ +GRTLQMSAL  G  ++V
Sbjct: 241  DPSLPSVRFLASNSGRTLQMSALPNGNVEIV 271


Top