BLASTX nr result

ID: Cimicifuga21_contig00009501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009501
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   143   2e-32
emb|CBI39697.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_002300362.1| multidrug resistance protein ABC transporter...   142   4e-32
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   139   3e-31
emb|CBI26749.3| unnamed protein product [Vitis vinifera]              139   3e-31

>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = +2

Query: 2    EPPLVIEAHKPGAGWPSHGEVDINDLQVRYAPHMPLVLRGLTCTIRGGMKTGVVGRTGSG 181
            EPPLVIE ++P   WPSHG+VDI DLQVRYAPHMPLVLRGLTCT  GGMKTG+VGRTGSG
Sbjct: 1218 EPPLVIEENRPACSWPSHGQVDIQDLQVRYAPHMPLVLRGLTCTFLGGMKTGIVGRTGSG 1277

Query: 182  KTTLIQTLFRLVEPAAGQI 238
            K+TLIQTLFR+VEPAAGQI
Sbjct: 1278 KSTLIQTLFRIVEPAAGQI 1296


>emb|CBI39697.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = +2

Query: 2    EPPLVIEAHKPGAGWPSHGEVDINDLQVRYAPHMPLVLRGLTCTIRGGMKTGVVGRTGSG 181
            EPPLVIE ++P   WPSHG+VDI DLQVRYAPHMPLVLRGLTCT  GGMKTG+VGRTGSG
Sbjct: 1014 EPPLVIEENRPACSWPSHGQVDIQDLQVRYAPHMPLVLRGLTCTFLGGMKTGIVGRTGSG 1073

Query: 182  KTTLIQTLFRLVEPAAGQI 238
            K+TLIQTLFR+VEPAAGQI
Sbjct: 1074 KSTLIQTLFRIVEPAAGQI 1092


>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/79 (82%), Positives = 73/79 (92%)
 Frame = +2

Query: 2    EPPLVIEAHKPGAGWPSHGEVDINDLQVRYAPHMPLVLRGLTCTIRGGMKTGVVGRTGSG 181
            EPPL+IEA +P   WPSHGEV+IN+LQVRYAPHMPLVLRGLTCT  GGMKTG+VGRTGSG
Sbjct: 1220 EPPLIIEASRPNRSWPSHGEVEINNLQVRYAPHMPLVLRGLTCTFPGGMKTGIVGRTGSG 1279

Query: 182  KTTLIQTLFRLVEPAAGQI 238
            K+TLIQTLFR+VEPAAG+I
Sbjct: 1280 KSTLIQTLFRIVEPAAGRI 1298


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/79 (79%), Positives = 70/79 (88%)
 Frame = +2

Query: 2    EPPLVIEAHKPGAGWPSHGEVDINDLQVRYAPHMPLVLRGLTCTIRGGMKTGVVGRTGSG 181
            EPPLV+E +KP   WPSHGEVDI DLQVRYAPH+PLVLRGLTC   GGMKTG+VGRTGSG
Sbjct: 1222 EPPLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSG 1281

Query: 182  KTTLIQTLFRLVEPAAGQI 238
            K+TLIQTLFR+VEP AG+I
Sbjct: 1282 KSTLIQTLFRIVEPTAGEI 1300


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/79 (79%), Positives = 70/79 (88%)
 Frame = +2

Query: 2    EPPLVIEAHKPGAGWPSHGEVDINDLQVRYAPHMPLVLRGLTCTIRGGMKTGVVGRTGSG 181
            EPPLV+E +KP   WPSHGEVDI DLQVRYAPH+PLVLRGLTC   GGMKTG+VGRTGSG
Sbjct: 1006 EPPLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSG 1065

Query: 182  KTTLIQTLFRLVEPAAGQI 238
            K+TLIQTLFR+VEP AG+I
Sbjct: 1066 KSTLIQTLFRIVEPTAGEI 1084


Top