BLASTX nr result
ID: Cimicifuga21_contig00008997
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00008997 (648 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm... 134 2e-29 ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|2... 132 4e-29 ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209... 125 7e-27 ref|XP_002319772.1| predicted protein [Populus trichocarpa] gi|1... 124 1e-26 ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi... 124 2e-26 >ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis] gi|223536760|gb|EEF38401.1| delta DNA polymerase, putative [Ricinus communis] Length = 126 Score = 134 bits (336), Expect = 2e-29 Identities = 61/84 (72%), Positives = 71/84 (84%), Gaps = 1/84 (1%) Frame = -1 Query: 450 GSNVTQPPALISHG-SLDLKDDYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLN 274 GSN+TQP ALISHG +LDL+DDYD +EVLRQFD+NMAYGPC GM+R+ RWERA +LGLN Sbjct: 43 GSNITQPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLN 102 Query: 273 PPKHVEGLLKQNKVGLECLWDGRI 202 PPK +E LLK KV ECLWDGR+ Sbjct: 103 PPKQIEDLLKGGKVNSECLWDGRV 126 >ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|222862326|gb|EEE99832.1| predicted protein [Populus trichocarpa] Length = 121 Score = 132 bits (333), Expect = 4e-29 Identities = 61/83 (73%), Positives = 69/83 (83%) Frame = -1 Query: 450 GSNVTQPPALISHGSLDLKDDYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLNP 271 GS++TQP AL+SH S DLKDDYD ++VLRQFD+N AYGPC GMSRLARWERA +LGLNP Sbjct: 39 GSDITQPTALVSHDSPDLKDDYDKHEDVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNP 98 Query: 270 PKHVEGLLKQNKVGLECLWDGRI 202 PK +EGLLK KV ECLWDG I Sbjct: 99 PKEIEGLLKGEKVRSECLWDGCI 121 >ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus] gi|449523375|ref|XP_004168699.1| PREDICTED: uncharacterized protein LOC101228956 [Cucumis sativus] Length = 125 Score = 125 bits (314), Expect = 7e-27 Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Frame = -1 Query: 564 ASRGGIKSFYRQXXXXXXXXXXXXXXXXXXXXXXXXT--YGSNVTQPPALISHGSLDLKD 391 ++RGG+K FY+Q + GS+ QP AL+SHGSLDL+D Sbjct: 3 STRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSDAVQPAALVSHGSLDLQD 62 Query: 390 DYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLNPPKHVEGLLKQNKVGLECLWD 211 DY + LRQFD+N AYGPC GM+R+ARWERA LGLNPPK + LLK KV LECLWD Sbjct: 63 DYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWD 122 Query: 210 GRI 202 R+ Sbjct: 123 SRV 125 >ref|XP_002319772.1| predicted protein [Populus trichocarpa] gi|118488437|gb|ABK96033.1| unknown [Populus trichocarpa] gi|222858148|gb|EEE95695.1| predicted protein [Populus trichocarpa] Length = 122 Score = 124 bits (312), Expect = 1e-26 Identities = 57/83 (68%), Positives = 65/83 (78%) Frame = -1 Query: 450 GSNVTQPPALISHGSLDLKDDYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLNP 271 GS++TQP A +SHGS D KD YD +E+LRQFD+NMAYGPC GMSRLARWERA +LGLNP Sbjct: 40 GSDITQPTAQVSHGSPDHKDYYDEHEELLRQFDMNMAYGPCLGMSRLARWERAQRLGLNP 99 Query: 270 PKHVEGLLKQNKVGLECLWDGRI 202 P EGLLK V EC WDGR+ Sbjct: 100 PNEFEGLLKAEMVQSECWWDGRV 122 >ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp. lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp. lyrata] Length = 122 Score = 124 bits (310), Expect = 2e-26 Identities = 55/83 (66%), Positives = 67/83 (80%) Frame = -1 Query: 450 GSNVTQPPALISHGSLDLKDDYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLNP 271 GS+V QP ALISHGSLDL +DYD +E+LRQFD+N+AYGPC GM+RL RWERA +LG+NP Sbjct: 40 GSDVIQPAALISHGSLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNP 99 Query: 270 PKHVEGLLKQNKVGLECLWDGRI 202 P +E LLK KV +CLW GR+ Sbjct: 100 PNEIEKLLKTGKVQQDCLWQGRV 122