BLASTX nr result

ID: Cimicifuga21_contig00008997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008997
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...   134   2e-29
ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209...   125   7e-27
ref|XP_002319772.1| predicted protein [Populus trichocarpa] gi|1...   124   1e-26
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...   124   2e-26

>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score =  134 bits (336), Expect = 2e-29
 Identities = 61/84 (72%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = -1

Query: 450 GSNVTQPPALISHG-SLDLKDDYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLN 274
           GSN+TQP ALISHG +LDL+DDYD  +EVLRQFD+NMAYGPC GM+R+ RWERA +LGLN
Sbjct: 43  GSNITQPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLN 102

Query: 273 PPKHVEGLLKQNKVGLECLWDGRI 202
           PPK +E LLK  KV  ECLWDGR+
Sbjct: 103 PPKQIEDLLKGGKVNSECLWDGRV 126


>ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|222862326|gb|EEE99832.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  132 bits (333), Expect = 4e-29
 Identities = 61/83 (73%), Positives = 69/83 (83%)
 Frame = -1

Query: 450 GSNVTQPPALISHGSLDLKDDYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLNP 271
           GS++TQP AL+SH S DLKDDYD  ++VLRQFD+N AYGPC GMSRLARWERA +LGLNP
Sbjct: 39  GSDITQPTALVSHDSPDLKDDYDKHEDVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNP 98

Query: 270 PKHVEGLLKQNKVGLECLWDGRI 202
           PK +EGLLK  KV  ECLWDG I
Sbjct: 99  PKEIEGLLKGEKVRSECLWDGCI 121


>ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus]
           gi|449523375|ref|XP_004168699.1| PREDICTED:
           uncharacterized protein LOC101228956 [Cucumis sativus]
          Length = 125

 Score =  125 bits (314), Expect = 7e-27
 Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
 Frame = -1

Query: 564 ASRGGIKSFYRQXXXXXXXXXXXXXXXXXXXXXXXXT--YGSNVTQPPALISHGSLDLKD 391
           ++RGG+K FY+Q                        +   GS+  QP AL+SHGSLDL+D
Sbjct: 3   STRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSDAVQPAALVSHGSLDLQD 62

Query: 390 DYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLNPPKHVEGLLKQNKVGLECLWD 211
           DY   +  LRQFD+N AYGPC GM+R+ARWERA  LGLNPPK +  LLK  KV LECLWD
Sbjct: 63  DYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWD 122

Query: 210 GRI 202
            R+
Sbjct: 123 SRV 125


>ref|XP_002319772.1| predicted protein [Populus trichocarpa] gi|118488437|gb|ABK96033.1|
           unknown [Populus trichocarpa]
           gi|222858148|gb|EEE95695.1| predicted protein [Populus
           trichocarpa]
          Length = 122

 Score =  124 bits (312), Expect = 1e-26
 Identities = 57/83 (68%), Positives = 65/83 (78%)
 Frame = -1

Query: 450 GSNVTQPPALISHGSLDLKDDYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLNP 271
           GS++TQP A +SHGS D KD YD  +E+LRQFD+NMAYGPC GMSRLARWERA +LGLNP
Sbjct: 40  GSDITQPTAQVSHGSPDHKDYYDEHEELLRQFDMNMAYGPCLGMSRLARWERAQRLGLNP 99

Query: 270 PKHVEGLLKQNKVGLECLWDGRI 202
           P   EGLLK   V  EC WDGR+
Sbjct: 100 PNEFEGLLKAEMVQSECWWDGRV 122


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  124 bits (310), Expect = 2e-26
 Identities = 55/83 (66%), Positives = 67/83 (80%)
 Frame = -1

Query: 450 GSNVTQPPALISHGSLDLKDDYDAPDEVLRQFDLNMAYGPCAGMSRLARWERANKLGLNP 271
           GS+V QP ALISHGSLDL +DYD  +E+LRQFD+N+AYGPC GM+RL RWERA +LG+NP
Sbjct: 40  GSDVIQPAALISHGSLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNP 99

Query: 270 PKHVEGLLKQNKVGLECLWDGRI 202
           P  +E LLK  KV  +CLW GR+
Sbjct: 100 PNEIEKLLKTGKVQQDCLWQGRV 122


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