BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008986
         (1524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855...   161   5e-37
emb|CBI26400.3| unnamed protein product [Vitis vinifera]              158   4e-36
ref|XP_002331419.1| predicted protein [Populus trichocarpa] gi|2...   111   4e-22
gb|AFK44423.1| unknown [Lotus japonicus]                              110   1e-21
ref|XP_003619792.1| Plastid DNA-binding protein [Medicago trunca...   109   2e-21

>ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855088 [Vitis vinifera]
          Length = 381

 Score =  161 bits (407), Expect = 5e-37
 Identities = 118/356 (33%), Positives = 177/356 (49%), Gaps = 10/356 (2%)
 Frame = +2

Query: 158  SKRVLAVISNAINGSNIRWRGRSFAALVPADSSEPQRSRKRVSKDERRAMIKAYVDKYRA 337
            S  V A I N ++ SNIR  GRS+A  VP+   + Q+SRKRV KDER+ M++++V+KYR 
Sbjct: 22   SSDVYAEIINVVHKSNIRRHGRSYAVSVPSYVVKAQKSRKRVPKDERKVMVESFVNKYRG 81

Query: 338  SNAGKYPTPTAAQKQVGGSYYIVKNILQELEYNXXXXXXXXXNGETQLEEVPKGECLISI 517
             NAGK+PT + AQK VGGSYYIV+ ++QELE+          N E  +E  P  E     
Sbjct: 82   MNAGKFPTVSEAQKHVGGSYYIVRELVQELEHKAKTSPLSRRN-ENLMENEPAKERKSLA 140

Query: 518  EAREAASSKTRADRISCTQRLVGKNESQTVVINNTDKDEATSNSFEAREETLSSIEMASF 697
            EA + ++S+   D +        ++  QTV I+  +  +A+S + EA+            
Sbjct: 141  EAEKVSTSRRTVDAVI-------EDYRQTVPISPLEASDASSKNLEAKGGKW-------V 186

Query: 698  DNALNSQTTGDPSNSDETNNHHINEAKVVTEAGQEASDSDKSERKNVSHLCIEAPEY-ST 874
            +  L+ + T     SD+ ++    ++ VV           K + K++SH  +E  E    
Sbjct: 187  EKILSEEVT----TSDDHSDFVAMQSGVV-----------KGKTKDISHAHLEKLENGKI 231

Query: 875  EAATSDGSLDLNEPKVVLEAGQENSELDKLERREVLNFCIEDPENSKKKEATDGSL---- 1042
            + A  D S  +  P V L+   E S             C+E     KK+E    SL    
Sbjct: 232  QDAQKDRSGFVETPSVTLKGETEGSSQP----------CLETIVGGKKEEVASESLLNFD 281

Query: 1043 -----PEAGQEASESNKLERDVFRKEVDDHQSPNSPTVWGNLRSFAESIINLWRKM 1195
                 PE  Q + E +   RD+ RK+ ++ + P   TVW NL+SFA  IIN+WRK+
Sbjct: 282  GTKHEPEQNQGSPELDDFSRDISRKQ-NEEELPKGSTVWANLKSFAGGIINMWRKL 336


>emb|CBI26400.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  158 bits (399), Expect = 4e-36
 Identities = 115/356 (32%), Positives = 170/356 (47%), Gaps = 10/356 (2%)
 Frame = +2

Query: 158  SKRVLAVISNAINGSNIRWRGRSFAALVPADSSEPQRSRKRVSKDERRAMIKAYVDKYRA 337
            S  V A I N ++ SNIR  GRS+A  VP+   + Q+SRKRV KDER+ M++++V+KYR 
Sbjct: 22   SSDVYAEIINVVHKSNIRRHGRSYAVSVPSYVVKAQKSRKRVPKDERKVMVESFVNKYRG 81

Query: 338  SNAGKYPTPTAAQKQVGGSYYIVKNILQELEYNXXXXXXXXXNGETQLEEVPKGECLISI 517
             NAGK+PT + AQK VGGSYYIV+ ++QELE+          N E  +E  P  E     
Sbjct: 82   MNAGKFPTVSEAQKHVGGSYYIVRELVQELEHKAKTSPLSRRN-ENLMENEPAKERKSLA 140

Query: 518  EAREAASSKTRADRISCTQRLVGKNESQTVVINNTDKDEATSNSFEAREETLSSIEMASF 697
            EA + ++S+   D +        ++  QTV I+  +  +A+S + EA+            
Sbjct: 141  EAEKVSTSRRTVDAVI-------EDYRQTVPISPLEASDASSKNLEAKGGKWVE------ 187

Query: 698  DNALNSQTTGDPSNSDETNNHHINEAKVVTEAGQEASDSDKSERKNVSHLCIEAPEY-ST 874
                                      K+++E    +S   K + K++SH  +E  E    
Sbjct: 188  --------------------------KILSEEVTTSSGVVKGKTKDISHAHLEKLENGKI 221

Query: 875  EAATSDGSLDLNEPKVVLEAGQENSELDKLERREVLNFCIEDPENSKKKEATDGSL---- 1042
            + A  D S  +  P V L+   E S             C+E     KK+E    SL    
Sbjct: 222  QDAQKDRSGFVETPSVTLKGETEGSSQP----------CLETIVGGKKEEVASESLLNFD 271

Query: 1043 -----PEAGQEASESNKLERDVFRKEVDDHQSPNSPTVWGNLRSFAESIINLWRKM 1195
                 PE  Q + E +   RD+ RK+ ++ + P   TVW NL+SFA  IIN+WRK+
Sbjct: 272  GTKHEPEQNQGSPELDDFSRDISRKQ-NEEELPKGSTVWANLKSFAGGIINMWRKL 326


>ref|XP_002331419.1| predicted protein [Populus trichocarpa] gi|222873633|gb|EEF10764.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  111 bits (278), Expect = 4e-22
 Identities = 56/139 (40%), Positives = 91/139 (65%)
 Frame = +2

Query: 179 ISNAINGSNIRWRGRSFAALVPADSSEPQRSRKRVSKDERRAMIKAYVDKYRASNAGKYP 358
           ++NAI+G+N++WR RS+AA VP+   +  +++KRVSKD+RRAM+++YV+KYR ++AGK+P
Sbjct: 22  VANAIHGANMQWRARSYAASVPSHMPQSHKAQKRVSKDDRRAMVESYVNKYRETHAGKFP 81

Query: 359 TPTAAQKQVGGSYYIVKNILQELEYNXXXXXXXXXNGETQLEEVPKGECLISIEAREAAS 538
           + + A+KQVGG+YY ++ I+QELEY          N + +L  V   E L+ ++      
Sbjct: 82  SISDARKQVGGNYYFIRKIVQELEYKSKISSSNSGNKKKELPIV--SEPLVKVKNMSTGG 139

Query: 539 SKTRADRISCTQRLVGKNE 595
           + +   R  C  R V  N+
Sbjct: 140 AMSDM-RTQCDPRAVPLND 157


>gb|AFK44423.1| unknown [Lotus japonicus]
          Length = 217

 Score =  110 bits (275), Expect = 1e-21
 Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
 Frame = +2

Query: 179 ISNAINGSNIRWRGRSFAAL--VPADSSEPQRSRKRVSKDERRAMIKAYVDKYRASNAGK 352
           + +++  SN++WRG S+AA    P++  E Q+ RKRVSK +RRA+++++V+K+R+ NAGK
Sbjct: 29  VCDSVGPSNVKWRGLSYAAASSAPSEPPESQKGRKRVSKQQRRAIVESFVNKHRSENAGK 88

Query: 353 YPTPTAAQKQVGGSYYIVKNILQELEYNXXXXXXXXXNGETQLEEVPKGECLISIEAREA 532
           +PT T  QKQVGG +Y ++ I++ELEY          N E ++      E LI    RE 
Sbjct: 89  FPTITDIQKQVGGGFYSIREIIKELEYK---SKMKSSNNEDEI----LLEKLIDKSKRET 141

Query: 533 ASSK-TRADRISCTQRLVGKNESQTVVINNTDKDEATSNSFEAREETLSSIEMASFDNAL 709
             S    +D I  ++    +++S  V+I   D  E  S  +E  EE+LS+    ++ N  
Sbjct: 142 TESVIVSSDNIETSREKPFQDDSLPVLI---DGKETVSTGYEHLEESLSAPSSENYSN-- 196

Query: 710 NSQTTGDPSNSDETNNH 760
              T G  S   +T NH
Sbjct: 197 ---TQGQESEFVDTENH 210


>ref|XP_003619792.1| Plastid DNA-binding protein [Medicago truncatula]
            gi|355494807|gb|AES76010.1| Plastid DNA-binding protein
            [Medicago truncatula]
          Length = 378

 Score =  109 bits (273), Expect = 2e-21
 Identities = 99/369 (26%), Positives = 170/369 (46%), Gaps = 37/369 (10%)
 Frame = +2

Query: 200  SNIRWRGRSFAAL-----VPADSSE--PQRSRKRVSKDERRAMIKAYVDKYRASNAGKYP 358
            S ++WRG S AA      VP+++ +  P+++  RVSK ERRAM++++V+KY++ NAGK+P
Sbjct: 32   SKLQWRGWSHAAAAAAACVPSETEDIRPRKNGSRVSKHERRAMVESFVNKYKSENAGKFP 91

Query: 359  TPTAAQKQVGGSYYIVKNILQELEYNXXXXXXXXXNGETQLEEVPKGECLISIEAREAAS 538
                 QK+VGGSYY V++I+QEL+Y                +E+   + L   + + A S
Sbjct: 92   AIKYTQKEVGGSYYTVRDIIQELKYKSKVKSL------NSTDEILVEKVLDESKLKTAES 145

Query: 539  SKTRADRISCTQRLVGKNESQTVVINNTDKDEATSNSFEARE----ETLSSIEMASFDNA 706
                ++ I   +    + +SQ+V++   D  EA +   E  E    +T S     S++  
Sbjct: 146  VNVSSENIETAKDRPIQKDSQSVLL---DDKEAVNTCCELEEKRGPQTFSQEGRLSYEVE 202

Query: 707  LNSQTTG-----------------DPSNSDETNNHHINEAKVVTEAGQEASDSD--KSER 829
              S T                     SNS+ TN+   +E      +   A +    K E 
Sbjct: 203  TISTTVSIDKRREQPALEDMYGKASHSNSEVTNDVKSDETVSSCPSDYVAPEIHLLKEEI 262

Query: 830  KNVSHLCIE--APEYSTEAATSDGSLDL-NEPKVVLE----AGQENSELDKLERREVLNF 988
            + VS   +E      S +      S+D+ N P + ++    AG E    D  +   V   
Sbjct: 263  EQVSAPIVEKSGSSCSKDHIHDSKSVDIKNHPTIKIKSFDKAGLERKVQDGAQDLPV--- 319

Query: 989  CIEDPENSKKKEATDGSLPEAGQEASESNKLERDVFRKEVDDHQSPNSPTVWGNLRSFAE 1168
             ++ P++ K++      L E+  + S   +    V         + +  T+WGNL+SFA+
Sbjct: 320  -VDSPQHIKEQSQESLKLDESKIDGSNMRESSVAV---------ASDKSTLWGNLKSFAD 369

Query: 1169 SIINLWRKM 1195
             ++N+WRK+
Sbjct: 370  GVLNMWRKL 378