BLASTX nr result

ID: Cimicifuga21_contig00008952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008952
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511329.1| carbohydrate binding protein, putative [Rici...   150   1e-34
ref|XP_002322198.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_003634242.1| PREDICTED: LOW QUALITY PROTEIN: L-type lecti...   135   3e-30
emb|CAN79354.1| hypothetical protein VITISV_010063 [Vitis vinifera]   135   3e-30
ref|XP_002318667.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29

>ref|XP_002511329.1| carbohydrate binding protein, putative [Ricinus communis]
           gi|223550444|gb|EEF51931.1| carbohydrate binding
           protein, putative [Ricinus communis]
          Length = 666

 Score =  150 bits (379), Expect = 1e-34
 Identities = 75/131 (57%), Positives = 84/131 (64%)
 Frame = -3

Query: 394 SFSDRGVARDINTTNLPVFXXXXXXXXXXXXXXXXXXSVACVVFALLCALGVYWFWWRKR 215
           SFSD G ARDINTTNLPVF                   + CV F L+CA G YWFW +K+
Sbjct: 267 SFSDTGNARDINTTNLPVFMLPSSSNSLSAGAIAGIT-IGCVAFVLICAYGFYWFWLKKK 325

Query: 214 DGXXXXXXXXXXXXEYWPHRFSYEELFEATKGFSKDQLLGSGGFGRVYKGVLPNNTEVGV 35
                         EYWPHRFSYEEL +AT GFSKDQLLGSGGFG+VY+G L NNTE+ V
Sbjct: 326 FNNQEEDEMEDWELEYWPHRFSYEELTQATNGFSKDQLLGSGGFGKVYRGTLSNNTEIAV 385

Query: 34  KCVAHNSKQGL 2
           KCV H+SKQGL
Sbjct: 386 KCVNHDSKQGL 396


>ref|XP_002322198.1| predicted protein [Populus trichocarpa] gi|222869194|gb|EEF06325.1|
           predicted protein [Populus trichocarpa]
          Length = 614

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/131 (52%), Positives = 82/131 (62%)
 Frame = -3

Query: 394 SFSDRGVARDINTTNLPVFXXXXXXXXXXXXXXXXXXSVACVVFALLCALGVYWFWWRKR 215
           SFSD GVARDIN TNLPVF                   + C VF ++C   VY  W++ +
Sbjct: 250 SFSDTGVARDINVTNLPVFSLPSSSNSLSAGAISGIT-IGCAVFVMICVFVVYCLWYKNK 308

Query: 214 DGXXXXXXXXXXXXEYWPHRFSYEELFEATKGFSKDQLLGSGGFGRVYKGVLPNNTEVGV 35
                         EYWPHRFSYEEL +AT GFSKDQLLGSGGFG+VY+G+L NN+E+ V
Sbjct: 309 SKDLEEDEIEDWELEYWPHRFSYEELSQATNGFSKDQLLGSGGFGKVYRGILSNNSEIAV 368

Query: 34  KCVAHNSKQGL 2
           KCV H+SKQGL
Sbjct: 369 KCVNHDSKQGL 379


>ref|XP_003634242.1| PREDICTED: LOW QUALITY PROTEIN: L-type lectin-domain containing
           receptor kinase S.1-like [Vitis vinifera]
          Length = 708

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/131 (54%), Positives = 82/131 (62%)
 Frame = -3

Query: 394 SFSDRGVARDINTTNLPVFXXXXXXXXXXXXXXXXXXSVACVVFALLCALGVYWFWWRKR 215
           S SD GVA DINTTNLPVF                   +A VVF L+C  G YWFW  ++
Sbjct: 309 SLSDTGVAADINTTNLPVFSPETASSSLSAGAIAGIA-IASVVFLLICLSGGYWFW--RK 365

Query: 214 DGXXXXXXXXXXXXEYWPHRFSYEELFEATKGFSKDQLLGSGGFGRVYKGVLPNNTEVGV 35
                         EYWPHRFSYEEL +AT GFSK++LLG GGFGRVY+G LPNNT+V V
Sbjct: 366 TKIEEEDEIEDWELEYWPHRFSYEELKQATDGFSKNELLGLGGFGRVYRGTLPNNTQVAV 425

Query: 34  KCVAHNSKQGL 2
           KCV H+SKQGL
Sbjct: 426 KCVNHDSKQGL 436


>emb|CAN79354.1| hypothetical protein VITISV_010063 [Vitis vinifera]
          Length = 659

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/131 (54%), Positives = 82/131 (62%)
 Frame = -3

Query: 394 SFSDRGVARDINTTNLPVFXXXXXXXXXXXXXXXXXXSVACVVFALLCALGVYWFWWRKR 215
           S SD GVA DINTTNLPVF                   +A VVF L+C  G YWFW  ++
Sbjct: 260 SLSDTGVAADINTTNLPVFSPETASSSLSAGAIAGIA-IASVVFLLICLSGGYWFW--RK 316

Query: 214 DGXXXXXXXXXXXXEYWPHRFSYEELFEATKGFSKDQLLGSGGFGRVYKGVLPNNTEVGV 35
                         EYWPHRFSYEEL +AT GFSK++LLG GGFGRVY+G LPNNT+V V
Sbjct: 317 TKIEEEDEIEDWELEYWPHRFSYEELKQATDGFSKNELLGLGGFGRVYRGTLPNNTQVAV 376

Query: 34  KCVAHNSKQGL 2
           KCV H+SKQGL
Sbjct: 377 KCVNHDSKQGL 387


>ref|XP_002318667.1| predicted protein [Populus trichocarpa] gi|222859340|gb|EEE96887.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/131 (51%), Positives = 81/131 (61%)
 Frame = -3

Query: 394 SFSDRGVARDINTTNLPVFXXXXXXXXXXXXXXXXXXSVACVVFALLCALGVYWFWWRKR 215
           SFSD GVARDIN TNLPVF                   + CVV  ++C   V WFW++++
Sbjct: 238 SFSDTGVARDINVTNLPVFSLPSSSNSLSAGSIAGIT-IGCVVLFVICVFVVSWFWYKQK 296

Query: 214 DGXXXXXXXXXXXXEYWPHRFSYEELFEATKGFSKDQLLGSGGFGRVYKGVLPNNTEVGV 35
                         EYWPHRFSY EL +AT GFS DQLLGSGGFG+VY+G L NN+++ V
Sbjct: 297 LRDSEEDEIEDWELEYWPHRFSYGELSQATNGFSIDQLLGSGGFGKVYRGTLSNNSDIAV 356

Query: 34  KCVAHNSKQGL 2
           KCV H+SKQGL
Sbjct: 357 KCVNHDSKQGL 367


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