BLASTX nr result

ID: Cimicifuga21_contig00008947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008947
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   255   5e-66
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              248   8e-64
ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|2...   248   1e-63
ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like ...   244   1e-62
ref|XP_002533644.1| conserved hypothetical protein [Ricinus comm...   236   4e-60

>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  255 bits (652), Expect = 5e-66
 Identities = 122/170 (71%), Positives = 142/170 (83%)
 Frame = +3

Query: 171 SKMSSFSRNLSDSRLSQIPGVKHGPNGTSFVSSGIPDLDKILGGGFHLGSLVMVMEDAEA 350
           ++MSSFSRN S +   Q PG+K GPNGT F+SSGIPDLDKILGGGF LGSLVMVMED EA
Sbjct: 6   TRMSSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEA 65

Query: 351 PHHLLLLRNFMSQGLVHNQPLLYASPSKDPKAFLGTLPTPISPKEEKGRATETEQEKGLR 530
           PHH+LLLRNFMSQGLVHNQPLLYASPSKDP+AFLGTLP+P+  K+++    + EQEKGLR
Sbjct: 66  PHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQEKGLR 125

Query: 531 IAWQYRKYFGEHQQNNDNHRDTRKEYFNEFDLRKALKMPLLGAQHLDCFS 680
           IAWQY+KYFGEHQ N D+HRDT+ EY N+FDLRK L+   L AQ++ C S
Sbjct: 126 IAWQYKKYFGEHQPNFDSHRDTKHEYCNDFDLRKPLERXFLTAQNICCLS 175


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  248 bits (633), Expect = 8e-64
 Identities = 122/172 (70%), Positives = 142/172 (82%), Gaps = 2/172 (1%)
 Frame = +3

Query: 171 SKMSSFSRNLSDSRLSQIPGVKHGPNGTSFVSSGIPDLDKILGGGFHLGSLVMVMEDAEA 350
           ++MSSFSRN S +   Q PG+K GPNGT F+SSGIPDLDKILGGGF LGSLVMVMED EA
Sbjct: 3   TRMSSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEA 62

Query: 351 PHHLLLLRNFMSQGLVHNQPLLYASPSKDPKAFLGTLPTPISPKEEK--GRATETEQEKG 524
           PHH+LLLRNFMSQGLVHNQPLLYASPSKDP+AFLGTLP+P+  K+++   R  E  QEKG
Sbjct: 63  PHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQLQEKG 122

Query: 525 LRIAWQYRKYFGEHQQNNDNHRDTRKEYFNEFDLRKALKMPLLGAQHLDCFS 680
           LRIAWQY+KYFGEH+ N D+HRDT+ EY N+FDLRK L+   L AQ++ C S
Sbjct: 123 LRIAWQYKKYFGEHRPNFDSHRDTKHEYCNDFDLRKPLERYFLTAQNICCLS 174


>ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|222865257|gb|EEF02388.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  248 bits (632), Expect = 1e-63
 Identities = 117/170 (68%), Positives = 141/170 (82%)
 Frame = +3

Query: 171 SKMSSFSRNLSDSRLSQIPGVKHGPNGTSFVSSGIPDLDKILGGGFHLGSLVMVMEDAEA 350
           +++SSFSRN+S     Q+PG+K GPNGT FVSSGIPDLDKILGGGF LGSLVM+MEDAEA
Sbjct: 6   TRISSFSRNISAVSAPQLPGIKCGPNGTFFVSSGIPDLDKILGGGFPLGSLVMIMEDAEA 65

Query: 351 PHHLLLLRNFMSQGLVHNQPLLYASPSKDPKAFLGTLPTPISPKEEKGRATETEQEKGLR 530
           PHH+LLLRNFMSQGLV NQPLLYASP+KDP+ FLGTLP P S K++K R  +TEQEKGLR
Sbjct: 66  PHHMLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTEQEKGLR 125

Query: 531 IAWQYRKYFGEHQQNNDNHRDTRKEYFNEFDLRKALKMPLLGAQHLDCFS 680
           IAWQY+KYF E+Q+N D+H+D+ +E+ N+FDLRK L+      Q +DC S
Sbjct: 126 IAWQYKKYFSENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVS 175


>ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like [Vitis vinifera]
          Length = 361

 Score =  244 bits (623), Expect = 1e-62
 Identities = 119/170 (70%), Positives = 141/170 (82%)
 Frame = +3

Query: 171 SKMSSFSRNLSDSRLSQIPGVKHGPNGTSFVSSGIPDLDKILGGGFHLGSLVMVMEDAEA 350
           ++MSSFSRN S +   Q PG+K GPNGT F+SSGIPDLDKILGGGF LGSLVMVMED EA
Sbjct: 6   TRMSSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEA 65

Query: 351 PHHLLLLRNFMSQGLVHNQPLLYASPSKDPKAFLGTLPTPISPKEEKGRATETEQEKGLR 530
           PHH+LLLRNFMSQGLVHNQPLLYASPSKDP+AFLGTLP+P+  K++  R+   + E+GLR
Sbjct: 66  PHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDD--RSHNRDPEQGLR 123

Query: 531 IAWQYRKYFGEHQQNNDNHRDTRKEYFNEFDLRKALKMPLLGAQHLDCFS 680
           IAWQY+KYFGEH+ N D+HRDT+ EY N+FDLRK L+   L AQ++ C S
Sbjct: 124 IAWQYKKYFGEHRPNFDSHRDTKHEYCNDFDLRKPLERYFLTAQNICCLS 173


>ref|XP_002533644.1| conserved hypothetical protein [Ricinus communis]
           gi|223526457|gb|EEF28732.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  236 bits (601), Expect = 4e-60
 Identities = 114/170 (67%), Positives = 136/170 (80%)
 Frame = +3

Query: 171 SKMSSFSRNLSDSRLSQIPGVKHGPNGTSFVSSGIPDLDKILGGGFHLGSLVMVMEDAEA 350
           ++ SSF+RNL     SQ PG+K GPNGT FVSSGI DLDKILGGG  LGSLVMVMEDAEA
Sbjct: 6   NRSSSFTRNLLAVSSSQNPGIKCGPNGTFFVSSGISDLDKILGGGIPLGSLVMVMEDAEA 65

Query: 351 PHHLLLLRNFMSQGLVHNQPLLYASPSKDPKAFLGTLPTPISPKEEKGRATETEQEKGLR 530
           PHH+LLLRNFMSQGL+ NQPLLY+SPSK+P+ FLGTLP+P S K++K R    E+EKGLR
Sbjct: 66  PHHMLLLRNFMSQGLIQNQPLLYSSPSKEPRVFLGTLPSPSSSKDDKLRKHHPEEEKGLR 125

Query: 531 IAWQYRKYFGEHQQNNDNHRDTRKEYFNEFDLRKALKMPLLGAQHLDCFS 680
           IAWQY+KYFGE+QQ  D HRD+++E+ N+FDLRK L+      Q +DC S
Sbjct: 126 IAWQYKKYFGENQQTFDGHRDSKQEFCNDFDLRKPLERHFFSGQRVDCVS 175


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