BLASTX nr result

ID: Cimicifuga21_contig00008946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008946
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
emb|CBI36035.3| unnamed protein product [Vitis vinifera]              130   9e-29
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   130   9e-29
emb|CAN82494.1| hypothetical protein VITISV_033043 [Vitis vinifera]   130   9e-29
emb|CBI36034.3| unnamed protein product [Vitis vinifera]              127   7e-28

>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  136 bits (342), Expect = 2e-30
 Identities = 71/115 (61%), Positives = 81/115 (70%)
 Frame = -1

Query: 347 TWFHQKPGDLRPQRLTDVNKGINQSTWRIPLSGLFGAEVARXXXXXXXXXXXXXXXXXXX 168
           +W  QKPG+LRP RLTDVN+G+N   WRIPLSGLFG+EV R                   
Sbjct: 101 SWLPQKPGELRPLRLTDVNRGMNMLNWRIPLSGLFGSEVERVLGGGLVPGSLVLVGGDPG 160

Query: 167 XGKSTLLLQIAAMIAEGCDFGTPAPVIYVSGEESVEQIANRADRMRIGTEDLYLY 3
            GKSTLLLQ+AA+IA+  D G  APV+YVSGEESVEQI NRADRM IGTE+LYLY
Sbjct: 161 VGKSTLLLQVAAIIADSEDPGGSAPVVYVSGEESVEQIGNRADRMEIGTEELYLY 215


>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  130 bits (328), Expect = 9e-29
 Identities = 69/115 (60%), Positives = 80/115 (69%)
 Frame = -1

Query: 347 TWFHQKPGDLRPQRLTDVNKGINQSTWRIPLSGLFGAEVARXXXXXXXXXXXXXXXXXXX 168
           +W  Q+P +++P RLTDVN+GINQ  WRIPL G FG EVAR                   
Sbjct: 160 SWLPQQPTEVQPLRLTDVNRGINQMNWRIPLHGPFGYEVARVLGGGLVPGSLVLVGGDPG 219

Query: 167 XGKSTLLLQIAAMIAEGCDFGTPAPVIYVSGEESVEQIANRADRMRIGTEDLYLY 3
            GKSTLLLQIAA+IAEG D G  +PV+YVSGEESVEQI NRADRMRI TE+L+LY
Sbjct: 220 AGKSTLLLQIAAIIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEELFLY 274


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  130 bits (328), Expect = 9e-29
 Identities = 69/115 (60%), Positives = 80/115 (69%)
 Frame = -1

Query: 347 TWFHQKPGDLRPQRLTDVNKGINQSTWRIPLSGLFGAEVARXXXXXXXXXXXXXXXXXXX 168
           +W  Q+P +++P RLTDVN+GINQ  WRIPL G FG EVAR                   
Sbjct: 201 SWLPQQPTEVQPLRLTDVNRGINQMNWRIPLHGPFGYEVARVLGGGLVPGSLVLVGGDPG 260

Query: 167 XGKSTLLLQIAAMIAEGCDFGTPAPVIYVSGEESVEQIANRADRMRIGTEDLYLY 3
            GKSTLLLQIAA+IAEG D G  +PV+YVSGEESVEQI NRADRMRI TE+L+LY
Sbjct: 261 AGKSTLLLQIAAIIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEELFLY 315


>emb|CAN82494.1| hypothetical protein VITISV_033043 [Vitis vinifera]
          Length = 415

 Score =  130 bits (328), Expect = 9e-29
 Identities = 69/115 (60%), Positives = 80/115 (69%)
 Frame = -1

Query: 347 TWFHQKPGDLRPQRLTDVNKGINQSTWRIPLSGLFGAEVARXXXXXXXXXXXXXXXXXXX 168
           +W  Q+P +++P RLTDVN+GINQ  WRIPL G FG EVAR                   
Sbjct: 201 SWLPQQPTEVQPLRLTDVNRGINQMNWRIPLHGPFGYEVARVLGGGLVPGSLVLVGGDPG 260

Query: 167 XGKSTLLLQIAAMIAEGCDFGTPAPVIYVSGEESVEQIANRADRMRIGTEDLYLY 3
            GKSTLLLQIAA+IAEG D G  +PV+YVSGEESVEQI NRADRMRI TE+L+LY
Sbjct: 261 AGKSTLLLQIAAIIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEELFLY 315


>emb|CBI36034.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  127 bits (320), Expect = 7e-28
 Identities = 70/115 (60%), Positives = 80/115 (69%)
 Frame = -1

Query: 347 TWFHQKPGDLRPQRLTDVNKGINQSTWRIPLSGLFGAEVARXXXXXXXXXXXXXXXXXXX 168
           +W  Q+P + +PQRLTDVN+GINQ  WRIPL G FG+EVAR                   
Sbjct: 28  SWLPQQPTETQPQRLTDVNRGINQLNWRIPLHGPFGSEVARVLGGGLVPGSLVLVGGDPG 87

Query: 167 XGKSTLLLQIAAMIAEGCDFGTPAPVIYVSGEESVEQIANRADRMRIGTEDLYLY 3
            GKSTLLLQIAA+IAEG D    +PV+YVSGEESVEQI NRADRMRI TEDL+LY
Sbjct: 88  AGKSTLLLQIAAIIAEGHD-DRSSPVVYVSGEESVEQIGNRADRMRIETEDLFLY 141


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